Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleReactionsWithJunction3.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0007482/0.0007482, allocations: 93.06 kB / 19.65 MB, free: 276 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0008776/0.0008776, allocations: 169 kB / 23.02 MB, free: 1.543 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.01/1.01, allocations: 177.1 MB / 203.4 MB, free: 5.629 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08772/0.08772, allocations: 17.47 MB / 277.4 MB, free: 11.55 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.SimpleReactionsWithJunction3,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction3")
translateModel(Chemical.Examples.SimpleReactionsWithJunction3,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleReactionsWithJunction3") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.303e-06/1.303e-06, allocations: 0 / 353.5 MB, free: 9.879 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.584e-05/1.714e-05, allocations: 6.25 kB / 353.5 MB, free: 9.871 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Processes.mo:1084:7-1084:40:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleReactionsWithJunction3): time 0.0282/0.02822, allocations: 33.28 MB / 386.8 MB, free: 8.699 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01178/0.04, allocations: 10.38 MB / 397.2 MB, free: 14.28 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0008799/0.04088, allocations: 63.5 kB / 397.3 MB, free: 14.21 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003263/0.04414, allocations: 1.869 MB / 399.1 MB, free: 12.34 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.001833/0.04597, allocations: 1.257 MB / 400.4 MB, free: 11.07 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.004533/0.05051, allocations: 4.158 MB / 404.5 MB, free: 6.895 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r_ref.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r_ref.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r_ref.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r_ref.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r_ref.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r_ref.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r_ref.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r_ref.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r_ref.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r_ref.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r_ref.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.002139/0.05264, allocations: 2.661 MB / 407.2 MB, free: 4.223 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0004582/0.0531, allocations: 432.2 kB / 407.6 MB, free: 3.758 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001095/0.0542, allocations: 1.466 MB / 409.1 MB, free: 2.289 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0009773/0.05517, allocations: 1.138 MB / 410.2 MB, free: 1.148 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0001945/0.05537, allocations: 216 kB / 410.4 MB, free: 0.9375 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.1674/0.2228, allocations: 1.951 MB / 412.4 MB, free: 38.67 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.000984/0.2238, allocations: 0.7789 MB / 413.2 MB, free: 38.67 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.002231/0.226, allocations: 0.8091 MB / 414 MB, free: 38.67 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.007285/0.2333, allocations: 3.91 MB / 417.9 MB, free: 38.44 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.479e-06/0.2333, allocations: 0 / 417.9 MB, free: 38.44 MB / 330.7 MB
Notification: Performance of FrontEnd: time 1.763e-06/0.2333, allocations: 1.219 kB / 417.9 MB, free: 38.44 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 9.089e-05/0.2334, allocations: 0 / 417.9 MB, free: 38.44 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 662
 * Number of variables: 662
Notification: Performance of Generate backend data structure: time 0.005183/0.2386, allocations: 3.467 MB / 421.4 MB, free: 36.96 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.191e-05/0.2386, allocations: 9.156 kB / 421.4 MB, free: 36.96 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001882/0.2405, allocations: 1.241 MB / 422.6 MB, free: 36.77 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001486/0.242, allocations: 1.438 MB / 424 MB, free: 36.35 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001651/0.2422, allocations: 389.6 kB / 424.4 MB, free: 36.09 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001855/0.2424, allocations: 202.8 kB / 424.6 MB, free: 36.02 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.002924/0.2453, allocations: 3.027 MB / 427.6 MB, free: 35.39 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.916e-05/0.2453, allocations: 192 / 427.6 MB, free: 35.39 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001048/0.2454, allocations: 87.33 kB / 427.7 MB, free: 35.32 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0001714/0.2456, allocations: 296.6 kB / 428 MB, free: 35.26 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.004032/0.2496, allocations: 3.804 MB / 431.8 MB, free: 34.86 MB / 330.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0122/0.2618, allocations: 11.48 MB / 443.3 MB, free: 26.12 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001746/0.2636, allocations: 1.096 MB / 444.4 MB, free: 25.03 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001107/0.2647, allocations: 0.7412 MB / 445.1 MB, free: 24.29 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.008955/0.2736, allocations: 8.471 MB / 453.6 MB, free: 15.87 MB / 330.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3e-05/0.2736, allocations: 50.38 kB / 453.7 MB, free: 15.8 MB / 330.7 MB
Notification: Performance of pre-optimization done (n=151): time 2.846e-06/0.2737, allocations: 0 / 453.7 MB, free: 15.8 MB / 330.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 51 greater than number of States 50 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 30 unassigned equations and 29 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 2.0769675211049616]