Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009537/0.0009537, allocations: 93.06 kB / 19.65 MB, free: 280 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009414/0.0009414, allocations: 173 kB / 23.03 MB, free: 1.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.056/1.056, allocations: 177.1 MB / 203.4 MB, free: 5.641 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.06967/0.06967, allocations: 12.76 MB / 272.7 MB, free: 292 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC")
translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.785e-06/2.785e-06, allocations: 0 / 346.8 MB, free: 1.098 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 3.908e-05/4.187e-05, allocations: 6.25 kB / 346.8 MB, free: 1.09 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC): time 0.009358/0.0094, allocations: 10.58 MB / 357.4 MB, free: 6.461 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01607/0.02547, allocations: 11.39 MB / 368.8 MB, free: 11.03 MB / 298.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.002774/0.02824, allocations: 98.94 kB / 368.9 MB, free: 10.93 MB / 298.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.001099/0.02934, allocations: 408 kB / 369.3 MB, free: 10.53 MB / 298.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.006161/0.0355, allocations: 2.198 MB / 371.5 MB, free: 8.316 MB / 298.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.004153/0.03965, allocations: 2.006 MB / 373.5 MB, free: 6.305 MB / 298.7 MB
Notification: Performance of NFFlatten.flatten: time 0.004082/0.04373, allocations: 2.872 MB / 376.4 MB, free: 3.418 MB / 298.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001081/0.04482, allocations: 392.1 kB / 376.8 MB, free: 3.008 MB / 298.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002729/0.04755, allocations: 1.375 MB / 378.2 MB, free: 1.629 MB / 298.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001927/0.04947, allocations: 1.243 MB / 379.4 MB, free: 388 kB / 298.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.000584/0.05006, allocations: 144 kB / 379.5 MB, free: 244 kB / 298.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0005512/0.05061, allocations: 156 kB / 379.7 MB, free: 88 kB / 298.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.000464/0.05107, allocations: 0.5409 MB / 380.2 MB, free: 15.54 MB / 314.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001085/0.05216, allocations: 0.7089 MB / 380.9 MB, free: 14.83 MB / 314.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.002955/0.05511, allocations: 1.868 MB / 382.8 MB, free: 12.96 MB / 314.7 MB
Notification: Performance of FrontEnd - DAE generated: time 6.301e-06/0.05512, allocations: 0 / 382.8 MB, free: 12.96 MB / 314.7 MB
Notification: Performance of FrontEnd: time 2.354e-06/0.05512, allocations: 0 / 382.8 MB, free: 12.96 MB / 314.7 MB
Notification: Performance of Transformations before backend: time 9.441e-05/0.05521, allocations: 0 / 382.8 MB, free: 12.96 MB / 314.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 287
 * Number of variables: 287
Notification: Performance of Generate backend data structure: time 0.003865/0.05908, allocations: 2.668 MB / 385.5 MB, free: 10.24 MB / 314.7 MB
Notification: Performance of prepare preOptimizeDAE: time 6.024e-05/0.05914, allocations: 15.98 kB / 385.5 MB, free: 10.22 MB / 314.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0008382/0.05998, allocations: 427.3 kB / 385.9 MB, free: 9.805 MB / 314.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002049/0.06203, allocations: 1.319 MB / 387.2 MB, free: 8.445 MB / 314.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 7.205e-05/0.0621, allocations: 86.64 kB / 387.3 MB, free: 8.359 MB / 314.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001412/0.06224, allocations: 124.4 kB / 387.4 MB, free: 8.238 MB / 314.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.00123/0.06347, allocations: 0.8633 MB / 388.3 MB, free: 7.328 MB / 314.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.321e-05/0.06349, allocations: 3.938 kB / 388.3 MB, free: 7.324 MB / 314.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 7.016e-05/0.06356, allocations: 44 kB / 388.3 MB, free: 7.281 MB / 314.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.404e-05/0.06359, allocations: 32 kB / 388.4 MB, free: 7.25 MB / 314.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0007988/0.06439, allocations: 477.1 kB / 388.8 MB, free: 6.773 MB / 314.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.005442/0.06983, allocations: 3.189 MB / 392 MB, free: 3.516 MB / 314.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0007164/0.07055, allocations: 472.4 kB / 392.5 MB, free: 3.031 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0003668/0.07091, allocations: 261.2 kB / 392.7 MB, free: 2.766 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 5.941e-05/0.07097, allocations: 20.94 kB / 392.8 MB, free: 2.746 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.507e-05/0.07101, allocations: 50.39 kB / 392.8 MB, free: 2.688 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=98): time 8.055e-06/0.07101, allocations: 0 / 392.8 MB, free: 2.688 MB / 314.7 MB
Notification: Performance of matching and sorting (n=161): time 0.02563/0.09664, allocations: 8.156 MB / 401 MB, free: 10.5 MB / 330.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 6.84e-05/0.09671, allocations: 94.42 kB / 401.1 MB, free: 10.39 MB / 330.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.00168/0.09839, allocations: 1.53 MB / 402.6 MB, free: 8.812 MB / 330.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0002167/0.09861, allocations: 53.7 kB / 402.6 MB, free: 8.754 MB / 330.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.00056/0.09917, allocations: 0.9352 MB / 403.6 MB, free: 7.805 MB / 330.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0007424/0.09991, allocations: 0.5811 MB / 404.2 MB, free: 7.219 MB / 330.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.000414/0.1003, allocations: 349 kB / 404.5 MB, free: 6.871 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001137/0.1004, allocations: 480.7 kB / 405 MB, free: 6.398 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0006116/0.1011, allocations: 315.8 kB / 405.3 MB, free: 6.09 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0009406/0.102, allocations: 0.8821 MB / 406.2 MB, free: 4.984 MB / 330.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001678/0.1037, allocations: 1.359 MB / 407.5 MB, free: 3.406 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 9.858e-06/0.1037, allocations: 4 kB / 407.5 MB, free: 3.402 MB / 330.7 MB
Notification: Performance of matching and sorting (n=236) (initialization): time 0.009894/0.1136, allocations: 3.212 MB / 410.7 MB, free: 172 kB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 3.219e-05/0.1136, allocations: 8 kB / 410.7 MB, free: 164 kB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.19e-05/0.1136, allocations: 20.05 kB / 410.8 MB, free: 144 kB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1777/0.2913, allocations: 3.027 MB / 413.8 MB, free: 64.5 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0006776/0.292, allocations: 237.7 kB / 414 MB, free: 64.5 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.01774/0.3097, allocations: 11.04 MB / 425.1 MB, free: 60.22 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001281/0.311, allocations: 96.66 kB / 425.2 MB, free: 60.19 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001267/0.3111, allocations: 71.8 kB / 425.2 MB, free: 60.18 MB / 330.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 52
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (120):
 * Single equations (assignments): 118
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(3,56,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of prepare postOptimizeDAE: time 0.0004606/0.3116, allocations: 255.6 kB / 425.5 MB, free: 59.96 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003383/0.3119, allocations: 278.2 kB / 425.8 MB, free: 59.85 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0002523/0.3122, allocations: 329.5 kB / 426.1 MB, free: 59.6 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.022e-05/0.3122, allocations: 16.73 kB / 426.1 MB, free: 59.6 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 3.516e-05/0.3122, allocations: 7.438 kB / 426.1 MB, free: 59.6 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 9.849e-06/0.3123, allocations: 11.34 kB / 426.1 MB, free: 59.6 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001721/0.314, allocations: 1.173 MB / 427.3 MB, free: 59.07 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.537e-05/0.314, allocations: 0 / 427.3 MB, free: 59.07 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0002894/0.3143, allocations: 102.6 kB / 427.4 MB, free: 59.07 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.01048/0.3248, allocations: 2.869 MB / 430.2 MB, free: 58.18 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001952/0.3249, allocations: 35.27 kB / 430.3 MB, free: 58.15 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.01496/0.3399, allocations: 10.97 MB / 441.3 MB, free: 47.39 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.567e-06/0.3399, allocations: 7.984 kB / 441.3 MB, free: 47.39 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.008589/0.3485, allocations: 3.447 MB / 444.7 MB, free: 43.98 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0009248/0.3494, allocations: 420.3 kB / 445.1 MB, free: 43.57 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.00018/0.3496, allocations: 31.98 kB / 445.1 MB, free: 43.54 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0006197/0.3502, allocations: 59.95 kB / 445.2 MB, free: 43.48 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0005629/0.3508, allocations: 158 kB / 445.4 MB, free: 43.32 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 6.433e-05/0.3508, allocations: 36 kB / 445.4 MB, free: 43.29 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0007379/0.3516, allocations: 0.9046 MB / 446.3 MB, free: 42.36 MB / 330.7 MB
Notification: Performance of sort global known variables: time 2.11e-07/0.3516, allocations: 0 / 446.3 MB, free: 42.36 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.001948/0.3535, allocations: 0.9102 MB / 447.2 MB, free: 41.45 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 1 (hemoglobinConservationLaw.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (45):
 * Single equations (assignments): 43
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(6,53,86.1%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0002164/0.3538, allocations: 125.7 kB / 447.3 MB, free: 41.32 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.004639/0.3584, allocations: 2.457 MB / 449.8 MB, free: 38.88 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 5.53e-06/0.3584, allocations: 0 / 449.8 MB, free: 38.88 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.003347/0.3617, allocations: 1.965 MB / 451.8 MB, free: 36.88 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0013/0.363, allocations: 346.8 kB / 452.1 MB, free: 36.57 MB / 330.7 MB
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Error: Error parsing unit %: Parse error
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.00499/0.368, allocations: 3.381 MB / 455.5 MB, free: 33.18 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0004525/0.3685, allocations: 0.492 MB / 456 MB, free: 32.65 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0003816/0.3689, allocations: 171.3 kB / 456.1 MB, free: 32.49 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001521/0.369, allocations: 88.48 kB / 456.2 MB, free: 32.4 MB / 330.7 MB
Notification: Performance of SimCode: time 2.816e-06/0.369, allocations: 0 / 456.2 MB, free: 32.4 MB / 330.7 MB
Notification: Performance of Templates: time 0.09679/0.4658, allocations: 72.07 MB / 0.5159 GB, free: 8.523 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.sim & ./Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 5.880731411278248]