Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001453/0.001453, allocations: 92.22 kB / 19.65 MB, free: 276 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001641/0.001641, allocations: 173 kB / 23.02 MB, free: 1.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9699/0.9699, allocations: 177.1 MB / 203.4 MB, free: 5.629 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.07789/0.07789, allocations: 12.75 MB / 272.7 MB, free: 280 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments")
translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.423e-06/1.423e-06, allocations: 3.938 kB / 346.7 MB, free: 1.262 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.443e-05/1.585e-05, allocations: 6.25 kB / 346.7 MB, free: 1.254 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.TwoConcentrationCompartments): time 0.003204/0.00322, allocations: 3.785 MB / 350.5 MB, free: 13.45 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.003464/0.006684, allocations: 3.1 MB / 353.6 MB, free: 10.34 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0001519/0.006835, allocations: 19.81 kB / 353.6 MB, free: 10.32 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0001846/0.00702, allocations: 71.28 kB / 353.7 MB, free: 10.25 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Hydraulic.mo:1482:17-1484:29:writable] Warning: In relation resistor.Resistance == 0.0, == on Real operands is deprecated in non-function contexts.
Notification: Performance of NFTyping.typeBindings: time 0.0009231/0.007943, allocations: 496.2 kB / 354.1 MB, free: 9.766 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.0009671/0.00891, allocations: 0.52 MB / 354.7 MB, free: 9.246 MB / 282.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003181/0.01209, allocations: 5.108 MB / 359.8 MB, free: 4.129 MB / 282.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001609/0.01225, allocations: 70.55 kB / 359.8 MB, free: 4.055 MB / 282.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001638/0.01389, allocations: 1.92 MB / 361.8 MB, free: 2.133 MB / 282.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002248/0.01614, allocations: 1.682 MB / 363.4 MB, free: 460 kB / 282.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003716/0.01651, allocations: 288 kB / 363.7 MB, free: 172 kB / 282.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0003508/0.01686, allocations: 292 kB / 364 MB, free: 15.88 MB / 298.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0006083/0.01747, allocations: 0.992 MB / 365 MB, free: 14.89 MB / 298.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0007276/0.0182, allocations: 0.9319 MB / 365.9 MB, free: 13.95 MB / 298.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.002035/0.02023, allocations: 2.63 MB / 368.6 MB, free: 11.32 MB / 298.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.048e-06/0.02024, allocations: 4 kB / 368.6 MB, free: 11.31 MB / 298.7 MB
Notification: Performance of FrontEnd: time 1.413e-06/0.02024, allocations: 0 / 368.6 MB, free: 11.31 MB / 298.7 MB
Notification: Performance of Transformations before backend: time 1.218e-05/0.02025, allocations: 0 / 368.6 MB, free: 11.31 MB / 298.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 164
 * Number of variables: 164
Notification: Performance of Generate backend data structure: time 0.008577/0.02883, allocations: 4.69 MB / 373.3 MB, free: 6.574 MB / 298.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.644e-05/0.02886, allocations: 15.98 kB / 373.3 MB, free: 6.559 MB / 298.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0005199/0.02938, allocations: 268.3 kB / 373.5 MB, free: 6.297 MB / 298.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001069/0.03045, allocations: 0.8759 MB / 374.4 MB, free: 5.387 MB / 298.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.001193/0.03165, allocations: 2.828 MB / 377.2 MB, free: 1.918 MB / 298.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.000322/0.03197, allocations: 152.1 kB / 377.4 MB, free: 1.77 MB / 298.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.002272/0.03424, allocations: 1.604 MB / 379 MB, free: 136 kB / 298.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.859e-05/0.03426, allocations: 0 / 379 MB, free: 136 kB / 298.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0002012/0.03446, allocations: 24 kB / 379 MB, free: 112 kB / 298.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.497e-05/0.03447, allocations: 16 kB / 379 MB, free: 96 kB / 298.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001398/0.03587, allocations: 0.8757 MB / 379.9 MB, free: 15.22 MB / 314.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01148/0.04735, allocations: 6.853 MB / 386.8 MB, free: 8.293 MB / 314.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001445/0.0488, allocations: 0.986 MB / 387.7 MB, free: 7.285 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001271/0.05007, allocations: 0.9044 MB / 388.6 MB, free: 6.371 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.0002514/0.05032, allocations: 24.94 kB / 388.7 MB, free: 6.344 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001812/0.05213, allocations: 1.47 MB / 390.1 MB, free: 4.84 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=123): time 2.675e-06/0.05213, allocations: 0 / 390.1 MB, free: 4.84 MB / 314.7 MB
Notification: Performance of matching and sorting (n=123): time 0.00488/0.05701, allocations: 2.775 MB / 392.9 MB, free: 2.055 MB / 314.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.182e-05/0.05706, allocations: 94.09 kB / 393 MB, free: 1.941 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0004276/0.05749, allocations: 0.6245 MB / 393.6 MB, free: 1.301 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0002054/0.0577, allocations: 65.7 kB / 393.7 MB, free: 1.23 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0002036/0.0579, allocations: 381.4 kB / 394.1 MB, free: 0.8516 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0004515/0.05835, allocations: 0.5814 MB / 394.6 MB, free: 272 kB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0006852/0.05904, allocations: 357.2 kB / 395 MB, free: 15.91 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 0.000146/0.05918, allocations: 0.5316 MB / 395.5 MB, free: 15.37 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001342/0.06053, allocations: 0.8841 MB / 396.4 MB, free: 14.48 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001818/0.06234, allocations: 1.075 MB / 397.5 MB, free: 13.38 MB / 330.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.004128/0.06647, allocations: 2.775 MB / 400.3 MB, free: 10.57 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.616e-06/0.06648, allocations: 3.938 kB / 400.3 MB, free: 10.57 MB / 330.7 MB
Notification: Performance of matching and sorting (n=237) (initialization): time 0.003821/0.0703, allocations: 2.39 MB / 402.7 MB, free: 8.156 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 5.126e-05/0.07035, allocations: 29.7 kB / 402.7 MB, free: 8.121 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.077e-05/0.07036, allocations: 4 kB / 402.7 MB, free: 8.117 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 2.413e-05/0.07039, allocations: 8 kB / 402.7 MB, free: 8.109 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.209/0.2794, allocations: 16.04 MB / 418.7 MB, free: 65.73 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 5.216e-05/0.2795, allocations: 10.53 kB / 418.7 MB, free: 65.73 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.003002/0.2825, allocations: 0.76 MB / 419.5 MB, free: 65.6 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001981/0.2827, allocations: 59.08 kB / 419.6 MB, free: 65.6 MB / 330.7 MB
Warning: Assuming fixed start value for the following 1 variables:
         inertia.q_in.q:VARIABLE(flow=true start = advectionStream.SolutionFlow unit = \"m3/s\" fixed = true nominal = 1.6666666666666667e-8 )  \"Volume flow\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 6
 * Number of states: 0 ()
 * Number of discrete variables: 5 (pulse.count,$PRE.pulse.count,pulse.T_start,$PRE.pulse.T_start,$whenCondition1)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (236):
 * Single equations (assignments): 235
 * Array equations: 0
 * Algorithm blocks: 1
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0007082/0.2834, allocations: 248.2 kB / 419.8 MB, free: 65.44 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0004562/0.2838, allocations: 135.8 kB / 419.9 MB, free: 65.44 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.003355/0.2872, allocations: 2.293 MB / 422.2 MB, free: 65.17 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 9.618e-06/0.2872, allocations: 15.03 kB / 422.2 MB, free: 65.17 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 7.745e-06/0.2872, allocations: 0 / 422.2 MB, free: 65.17 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.17e-05/0.2872, allocations: 7.969 kB / 422.3 MB, free: 65.16 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002119/0.2893, allocations: 2.053 MB / 424.3 MB, free: 64.44 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.851e-06/0.2893, allocations: 0 / 424.3 MB, free: 64.44 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04919/0.3385, allocations: 15.99 MB / 440.3 MB, free: 50.04 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 2.824e-05/0.3386, allocations: 8 kB / 440.3 MB, free: 50.03 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0008462/0.3394, allocations: 75.11 kB / 440.4 MB, free: 49.98 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 8.466e-06/0.3394, allocations: 8 kB / 440.4 MB, free: 49.97 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.476e-06/0.3394, allocations: 0 / 440.4 MB, free: 49.97 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.00449/0.3439, allocations: 2.914 MB / 443.3 MB, free: 47.42 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0007625/0.3447, allocations: 464.9 kB / 443.8 MB, free: 47.04 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0003102/0.345, allocations: 67.95 kB / 443.8 MB, free: 46.97 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.002161/0.3471, allocations: 0.6475 MB / 444.5 MB, free: 46.32 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0004138/0.3476, allocations: 140.3 kB / 444.6 MB, free: 46.19 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001558/0.3477, allocations: 39.97 kB / 444.6 MB, free: 46.15 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0002383/0.348, allocations: 375 kB / 445 MB, free: 45.78 MB / 330.7 MB
Notification: Performance of sort global known variables: time 9.1e-08/0.348, allocations: 4 kB / 445 MB, free: 45.78 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.001179/0.3491, allocations: 0.6121 MB / 445.6 MB, free: 45.18 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 103 (substance.state,substance1.state,advectionStream.c[2],advectionStream.c[3],advectionStream.c[4],advectionStream.c[5],advectionStream.c[6],advectionStream.c[7],advectionStream.c[8],advectionStream.c[9],advectionStream.c[10],advectionStream.c[11],advectionStream.c[12],advectionStream.c[13],advectionStream.c[14],advectionStream.c[15],advectionStream.c[16],advectionStream.c[17],advectionStream.c[18],advectionStream.c[19],advectionStream.c[20],advectionStream.c[21],advectionStream.c[22],advectionStream.c[23],advectionStream.c[24],advectionStream.c[25],advectionStream.c[26],advectionStream.c[27],advectionStream.c[28],advectionStream.c[29],advectionStream.c[30],advectionStream.c[31],advectionStream.c[32],advectionStream.c[33],advectionStream.c[34],advectionStream.c[35],advectionStream.c[36],advectionStream.c[37],advectionStream.c[38],advectionStream.c[39],advectionStream.c[40],advectionStream.c[41],advectionStream.c[42],advectionStream.c[43],advectionStream.c[44],advectionStream.c[45],advectionStream.c[46],advectionStream.c[47],advectionStream.c[48],advectionStream.c[49],advectionStream.c[50],advectionStream.c[51],advectionStream.c[52],advectionStream.c[53],advectionStream.c[54],advectionStream.c[55],advectionStream.c[56],advectionStream.c[57],advectionStream.c[58],advectionStream.c[59],advectionStream.c[60],advectionStream.c[61],advectionStream.c[62],advectionStream.c[63],advectionStream.c[64],advectionStream.c[65],advectionStream.c[66],advectionStream.c[67],advectionStream.c[68],advectionStream.c[69],advectionStream.c[70],advectionStream.c[71],advectionStream.c[72],advectionStream.c[73],advectionStream.c[74],advectionStream.c[75],advectionStream.c[76],advectionStream.c[77],advectionStream.c[78],advectionStream.c[79],advectionStream.c[80],advectionStream.c[81],advectionStream.c[82],advectionStream.c[83],advectionStream.c[84],advectionStream.c[85],advectionStream.c[86],advectionStream.c[87],advectionStream.c[88],advectionStream.c[89],advectionStream.c[90],advectionStream.c[91],advectionStream.c[92],advectionStream.c[93],advectionStream.c[94],advectionStream.c[95],advectionStream.c[96],advectionStream.c[97],advectionStream.c[98],advectionStream.c[99],elasticVessel.volume,elasticVessel1.volume,inertia.q_in.q)
 * Number of discrete variables: 3 ($whenCondition1,pulse.T_start,pulse.count)
 * Number of discrete states: 1 (pulse.count)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (123):
 * Single equations (assignments): 121
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 2
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0003378/0.3495, allocations: 197.3 kB / 445.8 MB, free: 44.98 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.002881/0.3523, allocations: 2.097 MB / 447.9 MB, free: 42.9 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 2.926e-06/0.3524, allocations: 0 / 447.9 MB, free: 42.9 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.001356/0.3537, allocations: 1.02 MB / 448.9 MB, free: 41.9 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001167/0.3549, allocations: 0.5656 MB / 449.5 MB, free: 41.38 MB / 330.7 MB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.005864/0.3607, allocations: 6.408 MB / 455.9 MB, free: 35.12 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001144/0.3609, allocations: 271.1 kB / 456.2 MB, free: 34.83 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.001856/0.3627, allocations: 0.5671 MB / 456.7 MB, free: 34.26 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0009857/0.3637, allocations: 84.5 kB / 456.8 MB, free: 34.18 MB / 330.7 MB
Notification: Performance of SimCode: time 1.042e-06/0.3637, allocations: 3.609 kB / 456.8 MB, free: 34.18 MB / 330.7 MB
Notification: Performance of Templates: time 0.03993/0.4036, allocations: 45.67 MB / 0.4907 GB, free: 5.09 MB / 346.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.sim & ./Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.700781928375363]