Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001337/0.001337, allocations: 93.06 kB / 19.65 MB, free: 280 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001313/0.001313, allocations: 169.3 kB / 23.02 MB, free: 1.555 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.031/1.031, allocations: 177.1 MB / 203.4 MB, free: 5.652 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.0963/0.0963, allocations: 17.47 MB / 277.4 MB, free: 11.56 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_")
translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.643e-06/1.643e-06, allocations: 3.938 kB / 353.5 MB, free: 9.863 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.237e-05/2.402e-05, allocations: 9.344 kB / 353.6 MB, free: 9.855 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.03385/0.03388, allocations: 36.1 MB / 389.6 MB, free: 5.867 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01372/0.0476, allocations: 11.01 MB / 400.7 MB, free: 10.81 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.00208/0.04968, allocations: 83.31 kB / 400.7 MB, free: 10.73 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003649/0.05333, allocations: 2.012 MB / 402.8 MB, free: 8.703 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.004715/0.05805, allocations: 1.536 MB / 404.3 MB, free: 7.156 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.005716/0.06376, allocations: 4.333 MB / 408.6 MB, free: 2.805 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.2464/0.3102, allocations: 3.62 MB / 412.2 MB, free: 33.88 MB / 330.8 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0009314/0.3111, allocations: 0.5531 MB / 412.8 MB, free: 33.75 MB / 330.8 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002614/0.3137, allocations: 2.047 MB / 414.8 MB, free: 33.75 MB / 330.8 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002329/0.3161, allocations: 1.635 MB / 416.5 MB, free: 33.75 MB / 330.8 MB
Notification: Performance of NFPackage.collectConstants: time 0.0005337/0.3166, allocations: 314.4 kB / 416.8 MB, free: 33.75 MB / 330.8 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.004308/0.3209, allocations: 2.047 MB / 418.8 MB, free: 33.75 MB / 330.8 MB
Notification: Performance of NFScalarize.scalarize: time 0.0007601/0.3217, allocations: 1.103 MB / 419.9 MB, free: 33.75 MB / 330.8 MB
Notification: Performance of NFVerifyModel.verify: time 0.001243/0.3229, allocations: 1.156 MB / 421.1 MB, free: 33.7 MB / 330.8 MB
Notification: Performance of NFConvertDAE.convert: time 0.005532/0.3285, allocations: 4.853 MB / 425.9 MB, free: 32.88 MB / 330.8 MB
Notification: Performance of FrontEnd - DAE generated: time 3.727e-06/0.3285, allocations: 0 / 425.9 MB, free: 32.88 MB / 330.8 MB
Notification: Performance of FrontEnd: time 1.673e-06/0.3285, allocations: 0 / 425.9 MB, free: 32.88 MB / 330.8 MB
Notification: Performance of Transformations before backend: time 6.508e-05/0.3285, allocations: 4.094 kB / 425.9 MB, free: 32.88 MB / 330.8 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.005756/0.3343, allocations: 4.721 MB / 430.7 MB, free: 30.23 MB / 330.8 MB
Notification: Performance of prepare preOptimizeDAE: time 4.238e-05/0.3343, allocations: 7.281 kB / 430.7 MB, free: 30.23 MB / 330.8 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002163/0.3365, allocations: 1.708 MB / 432.4 MB, free: 29.57 MB / 330.8 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001921/0.3384, allocations: 1.986 MB / 434.4 MB, free: 28.49 MB / 330.8 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002131/0.3386, allocations: 0.5001 MB / 434.9 MB, free: 28.08 MB / 330.8 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002428/0.3389, allocations: 293.7 kB / 435.2 MB, free: 27.99 MB / 330.8 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.004314/0.3432, allocations: 4.444 MB / 439.6 MB, free: 26.81 MB / 330.8 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.701e-05/0.3432, allocations: 192 / 439.6 MB, free: 26.81 MB / 330.8 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001486/0.3434, allocations: 119.8 kB / 439.7 MB, free: 26.73 MB / 330.8 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003014/0.3437, allocations: 474.5 kB / 440.2 MB, free: 26.57 MB / 330.8 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.005378/0.349, allocations: 5.697 MB / 445.9 MB, free: 21.3 MB / 330.8 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01471/0.3637, allocations: 15.71 MB / 461.6 MB, free: 5.82 MB / 330.8 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001686/0.3654, allocations: 1.27 MB / 462.9 MB, free: 4.547 MB / 330.8 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001062/0.3665, allocations: 0.8743 MB / 463.7 MB, free: 3.672 MB / 330.8 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.01058/0.3771, allocations: 9.866 MB / 473.6 MB, free: 9.855 MB / 346.8 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.551e-05/0.3771, allocations: 54.17 kB / 473.7 MB, free: 9.797 MB / 346.8 MB
Notification: Performance of pre-optimization done (n=188): time 3.106e-06/0.3771, allocations: 0 / 473.7 MB, free: 9.797 MB / 346.8 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 2.212080029770732]