Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.EnzymeKinetics.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001091/0.001091, allocations: 88.22 kB / 19.65 MB, free: 272 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001258/0.001258, allocations: 173 kB / 23.02 MB, free: 1.543 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9738/0.9738, allocations: 177.1 MB / 203.4 MB, free: 5.625 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.09973/0.09973, allocations: 17.47 MB / 277.4 MB, free: 11.54 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Examples.EnzymeKinetics,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.EnzymeKinetics") translateModel(Chemical.Examples.EnzymeKinetics,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.EnzymeKinetics") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.234e-06/2.234e-06, allocations: 0 / 353.5 MB, free: 9.855 MB / 282.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 3.269e-05/3.493e-05, allocations: 9.125 kB / 353.5 MB, free: 9.848 MB / 282.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.EnzymeKinetics): time 0.03882/0.03886, allocations: 44.14 MB / 397.7 MB, free: 13.79 MB / 330.7 MB Notification: Performance of NFInst.instExpressions: time 0.01885/0.05771, allocations: 12.86 MB / 410.5 MB, free: 0.875 MB / 330.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.003841/0.06155, allocations: 138.9 kB / 410.7 MB, free: 0.7383 MB / 330.7 MB Notification: Performance of NFTyping.typeComponents: time 0.1741/0.2357, allocations: 2.439 MB / 413.1 MB, free: 34.4 MB / 330.7 MB Notification: Performance of NFTyping.typeBindings: time 0.007418/0.2431, allocations: 2.607 MB / 415.7 MB, free: 33.91 MB / 330.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.007669/0.2508, allocations: 4.827 MB / 420.5 MB, free: 33.59 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.008945/0.2597, allocations: 6.731 MB / 427.3 MB, free: 31.81 MB / 330.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001715/0.2614, allocations: 1.368 MB / 428.6 MB, free: 31.46 MB / 330.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.004883/0.2663, allocations: 3.914 MB / 432.6 MB, free: 29.87 MB / 330.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.003519/0.2698, allocations: 3.102 MB / 435.7 MB, free: 28.36 MB / 330.7 MB Notification: Performance of NFPackage.collectConstants: time 0.0008112/0.2706, allocations: 0.6231 MB / 436.3 MB, free: 28.36 MB / 330.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.003978/0.2746, allocations: 2.359 MB / 438.6 MB, free: 27.77 MB / 330.7 MB Notification: Performance of NFScalarize.scalarize: time 0.0008537/0.2755, allocations: 2.077 MB / 440.7 MB, free: 26.34 MB / 330.7 MB Notification: Performance of NFVerifyModel.verify: time 0.001997/0.2775, allocations: 2.232 MB / 443 MB, free: 24.71 MB / 330.7 MB Notification: Performance of NFConvertDAE.convert: time 0.0057/0.2832, allocations: 7.665 MB / 450.6 MB, free: 17.73 MB / 330.7 MB Notification: Performance of FrontEnd - DAE generated: time 3.677e-06/0.2832, allocations: 0 / 450.6 MB, free: 17.73 MB / 330.7 MB Notification: Performance of FrontEnd: time 1.422e-06/0.2832, allocations: 0 / 450.6 MB, free: 17.73 MB / 330.7 MB Notification: Performance of Transformations before backend: time 6.023e-05/0.2832, allocations: 0 / 450.6 MB, free: 17.73 MB / 330.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 1844 * Number of variables: 1844 Notification: Performance of Generate backend data structure: time 0.007063/0.2903, allocations: 8.338 MB / 459 MB, free: 9.441 MB / 330.7 MB Notification: Performance of prepare preOptimizeDAE: time 4.032e-05/0.2903, allocations: 8.031 kB / 459 MB, free: 9.434 MB / 330.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002539/0.2929, allocations: 2.848 MB / 461.8 MB, free: 6.605 MB / 330.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.003559/0.2964, allocations: 3.558 MB / 465.4 MB, free: 3.203 MB / 330.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0004289/0.2969, allocations: 0.9598 MB / 466.3 MB, free: 2.148 MB / 330.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0005821/0.2974, allocations: 0.5825 MB / 466.9 MB, free: 1.578 MB / 330.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.01072/0.3082, allocations: 8.017 MB / 474.9 MB, free: 9.562 MB / 346.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 8.479e-05/0.3082, allocations: 192 / 474.9 MB, free: 9.562 MB / 346.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0003904/0.3086, allocations: 240 kB / 475.2 MB, free: 9.34 MB / 346.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0007419/0.3094, allocations: 0.8246 MB / 476 MB, free: 8.516 MB / 346.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.01431/0.3237, allocations: 9.772 MB / 485.8 MB, free: 14.73 MB / 362.7 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.07439/0.3981, allocations: 27.61 MB / 0.5013 GB, free: 3.684 MB / 378.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.003355/0.4014, allocations: 2.323 MB / 0.5036 GB, free: 1.367 MB / 378.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.002067/0.4035, allocations: 1.608 MB / 0.5052 GB, free: 15.75 MB / 394.7 MB Notification: Performance of preOpt evalFunc (simulation): time 0.01612/0.4196, allocations: 14.06 MB / 0.5189 GB, free: 1.789 MB / 394.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.358e-05/0.4197, allocations: 59.39 kB / 0.519 GB, free: 1.719 MB / 394.7 MB Notification: Performance of pre-optimization done (n=305): time 4.198e-06/0.4197, allocations: 0 / 0.519 GB, free: 1.719 MB / 394.7 MB Notification: Performance of matching and sorting (n=424): time 0.07002/0.4897, allocations: 28.08 MB / 0.5464 GB, free: 5.773 MB / 426.7 MB Notification: Performance of inlineWhenForInitialization (initialization): time 5.232e-05/0.4897, allocations: 86.08 kB / 0.5465 GB, free: 5.676 MB / 426.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.003554/0.4933, allocations: 3.183 MB / 0.5496 GB, free: 2.484 MB / 426.7 MB Notification: Performance of collectPreVariables (initialization): time 0.0008344/0.4941, allocations: 89.14 kB / 0.5497 GB, free: 2.395 MB / 426.7 MB Notification: Performance of collectInitialEqns (initialization): time 0.001839/0.496, allocations: 3.4 MB / 0.553 GB, free: 14.99 MB / 442.7 MB Notification: Performance of collectInitialBindings (initialization): time 0.001279/0.4972, allocations: 1.494 MB / 0.5544 GB, free: 13.52 MB / 442.7 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.00208/0.4993, allocations: 1.275 MB / 0.5557 GB, free: 12.23 MB / 442.7 MB Notification: Performance of setup shared object (initialization): time 0.0001068/0.4994, allocations: 484.5 kB / 0.5562 GB, free: 11.76 MB / 442.7 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.003787/0.5032, allocations: 2.655 MB / 0.5587 GB, free: 9.098 MB / 442.7 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.004546/0.5078, allocations: 4.475 MB / 0.5631 GB, free: 3.879 MB / 442.7 MB Notification: It was not possible to check the given initialization system for consistency symbolically, because the relevant equations are part of an algebraic loop. This is not supported yet. Notification: Performance of analyzeInitialSystem (initialization): time 0.1941/0.7019, allocations: 10.97 MB / 0.5738 GB, free: 121 MB / 442.7 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 5.278e-05/0.7019, allocations: 13.75 kB / 0.5738 GB, free: 121 MB / 442.7 MB Notification: Performance of matching and sorting (n=587) (initialization): time 0.01541/0.7173, allocations: 9.085 MB / 0.5827 GB, free: 120.7 MB / 442.7 MB Notification: Performance of prepare postOptimizeDAE: time 3.361e-05/0.7174, allocations: 21.62 kB / 0.5827 GB, free: 120.7 MB / 442.7 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0002093/0.7176, allocations: 164 kB / 0.5829 GB, free: 120.7 MB / 442.7 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.01282/0.7304, allocations: 4.396 MB / 0.5872 GB, free: 120.5 MB / 442.7 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.006666/0.7371, allocations: 1.773 MB / 0.5889 GB, free: 120.5 MB / 442.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.01052/0.7476, allocations: 9.737 MB / 0.5984 GB, free: 114.1 MB / 442.7 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.003572/0.7511, allocations: 265.8 kB / 0.5987 GB, free: 114.1 MB / 442.7 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0008376/0.752, allocations: 0.7309 MB / 0.5994 GB, free: 114.1 MB / 442.7 MB Warning: Assuming fixed start value for the following 1 variables: liquidWater.substance.dH:VARIABLE(fixed = true ) type: Real Warning: The initial conditions are over specified. The following 2 initial equations are redundant, so they are removed from the initialization system: chemicalReaction1.nextProducts[1].SelfClustering_dH = 0.0 chemicalReaction1.nextProducts[1].SelfClustering = false. Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 154 * Number of states: 0 () * Number of discrete variables: 12 (chemicalReaction.nextProducts[1].SelfClustering,chemicalReaction.processDefinition.SelfClustering,liquidWater.substanceDefinitionVar.SelfClustering,liquidWater.substanceDefinitionVar.data.phase,S.substanceDefinitionVar.SelfClustering,S.substanceDefinitionVar.data.phase,chemicalReaction1.products[1].definition.SelfClustering,chemicalReaction1.products[1].definition.data.phase,chemicalReaction1.nextProducts[1].SelfClustering,chemicalReaction1.substrates[1].definition.SelfClustering,chemicalReaction1.substrates[1].definition.data.phase,chemicalReaction.processDefinition.data.phase) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (425): * Single equations (assignments): 418 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 3 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,12,100.0%), (5,16,44.0%)} * Non-linear torn systems (#iteration vars, #inner vars): 2 systems {(9,26), (7,6)} Notification: Performance of prepare postOptimizeDAE: time 0.002399/0.7544, allocations: 418.8 kB / 0.5998 GB, free: 113.9 MB / 442.7 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.001745/0.7561, allocations: 0.7186 MB / 0.6005 GB, free: 113.9 MB / 442.7 MB Error: Internal error IndexReduction.pantelidesIndexReduction failed! System is structurally singular and cannot be handled because the number of unassigned equations is larger than the number of states. Use -d=bltdump to get more information. Error: Internal error Transformation Module PFPlusExt index Reduction Method Pantelides failed! Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.01093/0.7671, allocations: 8.586 MB / 0.6089 GB, free: 108.7 MB / 442.7 MB Error: post-optimization module wrapFunctionCalls (simulation) failed. " [Timeout remaining time 659] [Calling sys.exit(0), Time elapsed: 2.5570770474150777]