Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009462/0.0009462, allocations: 92.22 kB / 19.65 MB, free: 276 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001029/0.001029, allocations: 169 kB / 23.02 MB, free: 1.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9465/0.9465, allocations: 177.1 MB / 203.4 MB, free: 5.633 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1031/0.1031, allocations: 17.38 MB / 277.3 MB, free: 11.64 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.903e-06/1.903e-06, allocations: 0 / 353.4 MB, free: 9.98 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.507e-05/2.697e-05, allocations: 2.312 kB / 353.4 MB, free: 9.977 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.1888/0.1889, allocations: 80.24 MB / 433.7 MB, free: 12.44 MB / 330.7 MB
Notification: Performance of NFInst.instExpressions: time 0.1188/0.3077, allocations: 66.78 MB / 0.4887 GB, free: 3.008 MB / 362.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01101/0.3187, allocations: 230.2 kB / 0.4889 GB, free: 2.781 MB / 362.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.008683/0.3274, allocations: 2.733 MB / 0.4916 GB, free: 24 kB / 362.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.02537/0.3528, allocations: 9.407 MB / 0.5008 GB, free: 6.547 MB / 378.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.02778/0.3805, allocations: 14.83 MB / 0.5153 GB, free: 7.664 MB / 394.7 MB
Notification: Performance of NFFlatten.flatten: time 0.3618/0.7423, allocations: 91.32 MB / 0.6045 GB, free: 12.37 MB / 442.8 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.06763/0.8099, allocations: 54.62 MB / 0.6578 GB, free: 9.781 MB / 458.8 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.1225/0.9324, allocations: 75.04 MB / 0.7311 GB, free: 3.16 MB / 0.4949 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.4801/1.413, allocations: 51.31 MB / 0.7812 GB, free: 50.59 MB / 0.5107 GB
Notification: Performance of NFPackage.collectConstants: time 0.04147/1.454, allocations: 12.2 MB / 0.7931 GB, free: 50.59 MB / 0.5107 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.05771/1.512, allocations: 17.33 MB / 0.81 GB, free: 50.59 MB / 0.5107 GB
Notification: Performance of NFScalarize.scalarize: time 0.05013/1.562, allocations: 24.28 MB / 0.8337 GB, free: 46.6 MB / 0.5107 GB
Notification: Performance of NFVerifyModel.verify: time 0.08502/1.647, allocations: 31.12 MB / 0.8641 GB, free: 33.93 MB / 0.5107 GB
Notification: Performance of NFConvertDAE.convert: time 0.1413/1.788, allocations: 87 MB / 0.9491 GB, free: 5.898 MB / 0.5575 GB
Notification: Performance of FrontEnd - DAE generated: time 7.845e-06/1.788, allocations: 0 / 0.9491 GB, free: 5.898 MB / 0.5575 GB
Notification: Performance of FrontEnd: time 2.003e-06/1.788, allocations: 2.688 kB / 0.9491 GB, free: 5.898 MB / 0.5575 GB
Notification: Performance of Transformations before backend: time 0.003603/1.792, allocations: 3.281 kB / 0.9491 GB, free: 5.898 MB / 0.5575 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.388/2.18, allocations: 70.31 MB / 1.018 GB, free: 119.3 MB / 0.5575 GB
Notification: Performance of prepare preOptimizeDAE: time 4.34e-05/2.18, allocations: 11.91 kB / 1.018 GB, free: 119.3 MB / 0.5575 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0713/2.251, allocations: 19.72 MB / 1.037 GB, free: 109.7 MB / 0.5575 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.07242/2.324, allocations: 37.74 MB / 1.074 GB, free: 74.79 MB / 0.5575 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005663/2.329, allocations: 9.201 MB / 1.083 GB, free: 64.26 MB / 0.5575 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02452/2.354, allocations: 4.567 MB / 1.087 GB, free: 59.7 MB / 0.5575 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.1493/2.503, allocations: 58.04 MB / 1.144 GB, free: 0.8672 MB / 0.5575 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001684/2.505, allocations: 30.47 kB / 1.144 GB, free: 0.8555 MB / 0.5575 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.01721/2.522, allocations: 1.763 MB / 1.146 GB, free: 15.09 MB / 0.5732 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.00066/2.523, allocations: 1.06 MB / 1.147 GB, free: 14.04 MB / 0.5732 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.369/2.892, allocations: 61.49 MB / 1.207 GB, free: 119.7 MB / 0.5732 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.8398/3.731, allocations: 280.8 MB / 1.481 GB, free: 81.2 MB / 0.6044 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.272/6.003, allocations: 0.9689 GB / 2.45 GB, free: 103 MB / 0.6357 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.05722/6.061, allocations: 23.29 MB / 2.473 GB, free: 83.24 MB / 0.6357 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.5255/6.586, allocations: 156.8 MB / 2.626 GB, free: 120.2 MB / 0.6357 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002332/6.586, allocations: 337.5 kB / 2.626 GB, free: 119.9 MB / 0.6357 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.05833/6.645, allocations: 27.66 MB / 2.653 GB, free: 113.1 MB / 0.6357 GB
Notification: Performance of pre-optimization done (n=2949): time 0.0001662/6.645, allocations: 0 / 2.653 GB, free: 113.1 MB / 0.6357 GB
Notification: Performance of matching and sorting (n=3351): time 1.383/8.028, allocations: 230.7 MB / 2.878 GB, free: 114.2 MB / 0.6357 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002424/8.028, allocations: 444.8 kB / 2.879 GB, free: 114 MB / 0.6357 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.04912/8.077, allocations: 25.98 MB / 2.904 GB, free: 104.7 MB / 0.6357 GB
Notification: Performance of collectPreVariables (initialization): time 0.01297/8.09, allocations: 0.5688 MB / 2.905 GB, free: 104.5 MB / 0.6357 GB
Notification: Performance of collectInitialEqns (initialization): time 0.02187/8.112, allocations: 23.23 MB / 2.927 GB, free: 87.5 MB / 0.6357 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01823/8.13, allocations: 12.85 MB / 2.94 GB, free: 74.81 MB / 0.6357 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.02906/8.159, allocations: 10.31 MB / 2.95 GB, free: 64.48 MB / 0.6357 GB
Notification: Performance of setup shared object (initialization): time 5.372e-05/8.16, allocations: 476.8 kB / 2.95 GB, free: 64.01 MB / 0.6357 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.02735/8.187, allocations: 11.65 MB / 2.962 GB, free: 52.35 MB / 0.6357 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.3185/8.505, allocations: 32.16 MB / 2.993 GB, free: 105.4 MB / 0.6357 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.07424/8.58, allocations: 48.26 MB / 3.04 GB, free: 81.34 MB / 0.6357 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0006371/8.58, allocations: 124.8 kB / 3.04 GB, free: 81.34 MB / 0.6357 GB
Notification: Performance of matching and sorting (n=5583) (initialization): time 0.6465/9.227, allocations: 135.2 MB / 3.172 GB, free: 22.14 MB / 0.6357 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0003356/9.227, allocations: 192 kB / 3.173 GB, free: 21.96 MB / 0.6357 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0005842/9.228, allocations: 433.3 kB / 3.173 GB, free: 21.54 MB / 0.6357 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.5695/9.797, allocations: 158.8 MB / 3.328 GB, free: 94.3 MB / 0.6513 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.03162/9.829, allocations: 11.06 MB / 3.339 GB, free: 92.22 MB / 0.6513 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.2167/10.05, allocations: 88 MB / 3.425 GB, free: 8.996 MB / 0.6513 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.04047/10.09, allocations: 2.486 MB / 3.427 GB, free: 6.508 MB / 0.6513 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01395/10.1, allocations: 2.736 MB / 3.43 GB, free: 3.77 MB / 0.6513 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1983
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5439):
 * Single equations (assignments): 5430
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.03082/10.13, allocations: 2.899 MB / 3.433 GB, free: 1.812 MB / 0.6513 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01555/10.15, allocations: 4.162 MB / 3.437 GB, free: 15.39 MB / 0.6669 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.6916/10.84, allocations: 91.02 MB / 3.526 GB, free: 122.9 MB / 0.6669 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003822/10.84, allocations: 352.3 kB / 3.526 GB, free: 122.9 MB / 0.6669 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004905/10.84, allocations: 58.91 kB / 3.526 GB, free: 122.9 MB / 0.6669 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0009547/10.84, allocations: 185 kB / 3.526 GB, free: 122.9 MB / 0.6669 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.4916/11.33, allocations: 147.1 MB / 3.67 GB, free: 15.03 MB / 0.6669 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0003792/11.33, allocations: 8 kB / 3.67 GB, free: 15.02 MB / 0.6669 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.02737/11.36, allocations: 7.216 MB / 3.677 GB, free: 8.141 MB / 0.6669 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.4146/11.77, allocations: 53.07 MB / 3.729 GB, free: 90.28 MB / 0.6669 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.009062/11.78, allocations: 1.393 MB / 3.73 GB, free: 90.28 MB / 0.6669 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.1368/11.92, allocations: 49.29 MB / 3.778 GB, free: 73.38 MB / 0.6669 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 7.184e-06/11.92, allocations: 18.56 kB / 3.778 GB, free: 73.38 MB / 0.6669 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.4242/12.34, allocations: 104.4 MB / 3.88 GB, free: 33.79 MB / 0.6669 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02865/12.37, allocations: 9.747 MB / 3.89 GB, free: 25.91 MB / 0.6669 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01461/12.39, allocations: 0.8942 MB / 3.891 GB, free: 25.02 MB / 0.6669 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.02613/12.41, allocations: 1.565 MB / 3.892 GB, free: 23.45 MB / 0.6669 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.01506/12.43, allocations: 5.12 MB / 3.897 GB, free: 18.32 MB / 0.6669 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.006936/12.44, allocations: 1.35 MB / 3.899 GB, free: 16.97 MB / 0.6669 GB
Notification: Performance of sorting global known variables: time 0.02538/12.46, allocations: 14.77 MB / 3.913 GB, free: 2.336 MB / 0.6669 GB
Notification: Performance of sort global known variables: time 1.71e-07/12.46, allocations: 0 / 3.913 GB, free: 2.336 MB / 0.6669 GB
Notification: Performance of remove unused functions: time 0.3408/12.8, allocations: 15.39 MB / 3.928 GB, free: 116.1 MB / 0.6825 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3666):
 * Single equations (assignments): 3657
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0118/12.81, allocations: 3.419 MB / 3.931 GB, free: 115.9 MB / 0.6825 GB
Notification: Performance of simCode: created initialization part: time 0.1031/12.92, allocations: 42.05 MB / 3.972 GB, free: 113 MB / 0.6825 GB
Notification: Performance of simCode: created event and clocks part: time 1.635e-05/12.92, allocations: 2.125 kB / 3.972 GB, free: 113 MB / 0.6825 GB
Notification: Performance of simCode: created simulation system equations: time 0.06759/12.98, allocations: 22.87 MB / 3.995 GB, free: 110.8 MB / 0.6825 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0472/13.03, allocations: 8.183 MB / 4.003 GB, free: 110 MB / 0.6825 GB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1939/13.22, allocations: 92.47 MB / 4.093 GB, free: 57.94 MB / 0.6825 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.01978/13.24, allocations: 13.91 MB / 4.107 GB, free: 50.75 MB / 0.6825 GB
Notification: Performance of simCode: alias equations: time 0.0329/13.28, allocations: 12.04 MB / 4.118 GB, free: 43.91 MB / 0.6825 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.01174/13.29, allocations: 3.597 MB / 4.122 GB, free: 41.13 MB / 0.6825 GB
Notification: Performance of SimCode: time 2.845e-06/13.29, allocations: 0 / 4.122 GB, free: 41.13 MB / 0.6825 GB
Notification: Performance of Templates: time 2.04/15.33, allocations: 0.9126 GB / 5.035 GB, free: 48.52 MB / 0.6825 GB
"
[Timeout remaining time 645]
make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 38.948620612733066]