Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001847/0.001847, allocations: 85.48 kB / 19.44 MB, free: 344 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.00202/0.00202, allocations: 173.2 kB / 22.76 MB, free: 1.664 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.596/1.596, allocations: 177.1 MB / 203.1 MB, free: 5.605 MB / 186.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1449/0.1449, allocations: 17.46 MB / 277 MB, free: 11.58 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.432e-06/1.432e-06, allocations: 0 / 352.8 MB, free: 10.19 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.83e-05/2.974e-05, allocations: 2.312 kB / 352.8 MB, free: 10.19 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.2774/0.2775, allocations: 82.96 MB / 435.8 MB, free: 11.27 MB / 330.7 MB
Notification: Performance of NFInst.instExpressions: time 0.477/0.7544, allocations: 220.2 MB / 0.6406 GB, free: 2.586 MB / 442.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0136/0.768, allocations: 230 kB / 0.6408 GB, free: 2.586 MB / 442.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.01429/0.7823, allocations: 4.515 MB / 0.6452 GB, free: 1.305 MB / 442.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.0603/0.8426, allocations: 18.52 MB / 0.6633 GB, free: 9.316 MB / 458.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.09809/0.9407, allocations: 33.51 MB / 0.6961 GB, free: 3.711 MB / 474.7 MB
Notification: Performance of NFFlatten.flatten: time 0.6158/1.557, allocations: 91.37 MB / 0.7853 GB, free: 6.328 MB / 0.5105 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.08198/1.639, allocations: 54.63 MB / 0.8386 GB, free: 12.92 MB / 0.5262 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.1738/1.812, allocations: 78.03 MB / 0.9148 GB, free: 7.77 MB / 0.5574 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.1274/1.94, allocations: 51.34 MB / 0.965 GB, free: 8.312 MB / 0.6043 GB
Notification: Performance of NFPackage.collectConstants: time 0.5865/2.526, allocations: 12.2 MB / 0.9769 GB, free: 57.1 MB / 0.6044 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1023/2.629, allocations: 34.09 MB / 1.01 GB, free: 57.1 MB / 0.6044 GB
Notification: Performance of NFScalarize.scalarize: time 0.04623/2.675, allocations: 24.28 MB / 1.034 GB, free: 57.1 MB / 0.6044 GB
Notification: Performance of NFVerifyModel.verify: time 0.09843/2.773, allocations: 31.11 MB / 1.064 GB, free: 57.1 MB / 0.6044 GB
Notification: Performance of NFConvertDAE.convert: time 1.043/3.816, allocations: 169.4 MB / 1.23 GB, free: 18.74 MB / 0.6515 GB
Notification: Performance of FrontEnd - DAE generated: time 8.676e-06/3.816, allocations: 0 / 1.23 GB, free: 18.74 MB / 0.6515 GB
Notification: Performance of FrontEnd: time 2.364e-06/3.816, allocations: 4.781 kB / 1.23 GB, free: 18.74 MB / 0.6515 GB
Notification: Performance of Transformations before backend: time 0.003919/3.82, allocations: 0.9688 kB / 1.23 GB, free: 18.74 MB / 0.6515 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2961/4.116, allocations: 78.68 MB / 1.306 GB, free: 10.53 MB / 0.6671 GB
Notification: Performance of prepare preOptimizeDAE: time 4.982e-05/4.116, allocations: 9.281 kB / 1.307 GB, free: 10.53 MB / 0.6671 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.1211/4.237, allocations: 19.73 MB / 1.326 GB, free: 2.219 MB / 0.6671 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1248/4.362, allocations: 38.87 MB / 1.364 GB, free: 7.734 MB / 0.6828 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.01115/4.373, allocations: 9.212 MB / 1.373 GB, free: 0.7578 MB / 0.6828 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0343/4.407, allocations: 4.554 MB / 1.377 GB, free: 188 kB / 0.6828 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.3238/4.731, allocations: 109 MB / 1.484 GB, free: 3.891 MB / 0.7921 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002191/4.733, allocations: 28.5 kB / 1.484 GB, free: 3.879 MB / 0.7921 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03378/4.767, allocations: 1.759 MB / 1.485 GB, free: 2.121 MB / 0.7921 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001192/4.768, allocations: 1.059 MB / 1.486 GB, free: 1.055 MB / 0.7921 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.5726/5.341, allocations: 137.9 MB / 1.621 GB, free: 284.5 MB / 0.8078 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.78/7.121, allocations: 1.007 GB / 2.628 GB, free: 28.12 MB / 0.8078 GB
Notification: Performance of preOpt comSubExp (simulation): time 3.055/10.18, allocations: 0.639 GB / 3.267 GB, free: 270 MB / 0.8078 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.09958/10.27, allocations: 53.75 MB / 3.32 GB, free: 269.5 MB / 0.8078 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.8355/11.11, allocations: 377.3 MB / 3.688 GB, free: 216.2 MB / 0.8078 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002548/11.11, allocations: 342.1 kB / 3.689 GB, free: 216.1 MB / 0.8078 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09477/11.21, allocations: 27.7 MB / 3.716 GB, free: 209.3 MB / 0.8078 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001771/11.21, allocations: 0 / 3.716 GB, free: 209.3 MB / 0.8078 GB
Notification: Performance of matching and sorting (n=3387): time 2.304/13.51, allocations: 378.3 MB / 4.085 GB, free: 170.8 MB / 0.8078 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002581/13.51, allocations: 449.3 kB / 4.086 GB, free: 170.4 MB / 0.8078 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.06974/13.58, allocations: 39.45 MB / 4.124 GB, free: 131.6 MB / 0.8078 GB
Notification: Performance of collectPreVariables (initialization): time 0.013/13.59, allocations: 0.572 MB / 4.125 GB, free: 131.1 MB / 0.8078 GB
Notification: Performance of collectInitialEqns (initialization): time 0.3464/13.94, allocations: 25.15 MB / 4.149 GB, free: 247.1 MB / 0.8078 GB
Notification: Performance of collectInitialBindings (initialization): time 0.03467/13.97, allocations: 18.12 MB / 4.167 GB, free: 239.3 MB / 0.8078 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.05277/14.03, allocations: 12.34 MB / 4.179 GB, free: 238.7 MB / 0.8078 GB
Notification: Performance of setup shared object (initialization): time 7.538e-05/14.03, allocations: 480.6 kB / 4.179 GB, free: 238.3 MB / 0.8078 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.06552/14.09, allocations: 33.6 MB / 4.212 GB, free: 238.2 MB / 0.8078 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.1063/14.2, allocations: 56.67 MB / 4.268 GB, free: 204 MB / 0.8078 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1512/14.35, allocations: 107.8 MB / 4.373 GB, free: 140.2 MB / 0.8078 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0007845/14.35, allocations: 128 kB / 4.373 GB, free: 140.1 MB / 0.8078 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.665/16.02, allocations: 227.7 MB / 4.595 GB, free: 150.9 MB / 0.8078 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0009009/16.02, allocations: 194.1 kB / 4.596 GB, free: 150.9 MB / 0.8078 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0011/16.02, allocations: 446.6 kB / 4.596 GB, free: 150.6 MB / 0.8078 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.9483/16.97, allocations: 186.7 MB / 4.778 GB, free: 201.4 MB / 0.8078 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.05456/17.02, allocations: 11.25 MB / 4.789 GB, free: 201 MB / 0.8078 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.034/18.05, allocations: 297.2 MB / 5.08 GB, free: 166.4 MB / 0.8078 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.06567/18.12, allocations: 2.501 MB / 5.082 GB, free: 165.1 MB / 0.8078 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.02055/18.14, allocations: 2.798 MB / 5.085 GB, free: 164.2 MB / 0.8078 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.06226/18.2, allocations: 16.81 MB / 5.101 GB, free: 153.6 MB / 0.8078 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.04039/18.24, allocations: 4.201 MB / 5.105 GB, free: 153.2 MB / 0.8078 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.326/19.57, allocations: 136 MB / 5.238 GB, free: 191.3 MB / 0.8078 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0004129/19.57, allocations: 361.8 kB / 5.238 GB, free: 191.3 MB / 0.8078 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0006069/19.57, allocations: 58.3 kB / 5.239 GB, free: 191.3 MB / 0.8078 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.00135/19.57, allocations: 178.9 kB / 5.239 GB, free: 191.3 MB / 0.8078 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.093/20.67, allocations: 218.8 MB / 5.452 GB, free: 89.73 MB / 0.8078 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0004594/20.67, allocations: 9 kB / 5.452 GB, free: 89.73 MB / 0.8078 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.4539/21.12, allocations: 7.321 MB / 5.459 GB, free: 183.3 MB / 0.8078 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.2773/21.4, allocations: 64.55 MB / 5.523 GB, free: 181.7 MB / 0.8078 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01376/21.41, allocations: 1.427 MB / 5.524 GB, free: 181.7 MB / 0.8078 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3497/21.76, allocations: 153 MB / 5.673 GB, free: 127.1 MB / 0.8078 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.306e-05/21.76, allocations: 18.88 kB / 5.673 GB, free: 127.1 MB / 0.8078 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.264/23.02, allocations: 180.5 MB / 5.85 GB, free: 176.7 MB / 0.8078 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.04353/23.07, allocations: 9.86 MB / 5.859 GB, free: 175.3 MB / 0.8078 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.02207/23.09, allocations: 0.893 MB / 5.86 GB, free: 175.3 MB / 0.8078 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.04189/23.13, allocations: 1.578 MB / 5.862 GB, free: 174.8 MB / 0.8078 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02325/23.15, allocations: 5.148 MB / 5.867 GB, free: 172.3 MB / 0.8078 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01283/23.17, allocations: 1.392 MB / 5.868 GB, free: 172 MB / 0.8078 GB
Notification: Performance of sorting global known variables: time 0.04577/23.21, allocations: 25.16 MB / 5.893 GB, free: 159.6 MB / 0.8078 GB
Notification: Performance of sort global known variables: time 2.11e-07/23.21, allocations: 0 / 5.893 GB, free: 159.6 MB / 0.8078 GB
Notification: Performance of remove unused functions: time 0.09599/23.31, allocations: 19.75 MB / 5.912 GB, free: 154 MB / 0.8078 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.03542/23.34, allocations: 11.22 MB / 5.923 GB, free: 144.8 MB / 0.8078 GB
Notification: Performance of simCode: created initialization part: time 0.5788/23.92, allocations: 81.69 MB / 6.003 GB, free: 191.9 MB / 0.8078 GB
Notification: Performance of simCode: created event and clocks part: time 2.043e-05/23.92, allocations: 3.969 kB / 6.003 GB, free: 191.9 MB / 0.8078 GB
Notification: Performance of simCode: created simulation system equations: time 0.1266/24.05, allocations: 39.81 MB / 6.041 GB, free: 188.9 MB / 0.8078 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.08286/24.13, allocations: 8.515 MB / 6.05 GB, free: 188.1 MB / 0.8078 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.2974/24.43, allocations: 116.1 MB / 6.163 GB, free: 155.8 MB / 0.8078 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.07242/24.5, allocations: 27.77 MB / 6.19 GB, free: 144.8 MB / 0.8078 GB
Notification: Performance of simCode: alias equations: time 0.06126/24.56, allocations: 12.45 MB / 6.202 GB, free: 137.1 MB / 0.8078 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02736/24.59, allocations: 3.868 MB / 6.206 GB, free: 133.8 MB / 0.8078 GB
Notification: Performance of SimCode: time 2.385e-06/24.59, allocations: 0 / 6.206 GB, free: 133.8 MB / 0.8078 GB
Notification: Performance of Templates: time 2.836/27.43, allocations: 1.028 GB / 7.234 GB, free: 167.1 MB / 0.8234 GB
"
[Timeout remaining time 633]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 68.92972050595563]