Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002042/0.002042, allocations: 93.47 kB / 19.44 MB, free: 336 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.00225/0.00225, allocations: 169.2 kB / 22.76 MB, free: 1.664 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.642/1.642, allocations: 177.1 MB / 203.1 MB, free: 5.566 MB / 186.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1573/0.1573, allocations: 17.46 MB / 277 MB, free: 11.62 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_")
translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.354e-06/2.354e-06, allocations: 0 / 352.8 MB, free: 10.21 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 3.28e-05/3.516e-05, allocations: 2.312 kB / 352.8 MB, free: 10.21 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.05721/0.05724, allocations: 33.72 MB / 386.5 MB, free: 8.613 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.02858/0.08582, allocations: 10.96 MB / 397.5 MB, free: 13.61 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.003297/0.08911, allocations: 83.31 kB / 397.6 MB, free: 13.52 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.006428/0.09554, allocations: 1.985 MB / 399.6 MB, free: 11.53 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.005407/0.1009, allocations: 1.544 MB / 401.1 MB, free: 9.973 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.01051/0.1115, allocations: 4.325 MB / 405.4 MB, free: 5.629 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.007753/0.1192, allocations: 3.611 MB / 409 MB, free: 2 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001664/0.1209, allocations: 0.5505 MB / 409.6 MB, free: 1.402 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.1655/0.2863, allocations: 2.045 MB / 411.6 MB, free: 35.04 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.003485/0.2898, allocations: 1.626 MB / 413.3 MB, free: 35.04 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0009411/0.2908, allocations: 314.3 kB / 413.6 MB, free: 35.04 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.005829/0.2966, allocations: 2.055 MB / 415.6 MB, free: 35.04 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.001394/0.298, allocations: 1.101 MB / 416.7 MB, free: 35.04 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.003077/0.3011, allocations: 1.148 MB / 417.9 MB, free: 35.04 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.01124/0.3123, allocations: 6.29 MB / 424.2 MB, free: 34.67 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.068e-06/0.3123, allocations: 0 / 424.2 MB, free: 34.67 MB / 330.7 MB
Notification: Performance of FrontEnd: time 2.725e-06/0.3123, allocations: 1.688 kB / 424.2 MB, free: 34.67 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 0.0002014/0.3125, allocations: 0 / 424.2 MB, free: 34.67 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.01165/0.3242, allocations: 4.949 MB / 429.1 MB, free: 32.11 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.989e-05/0.3242, allocations: 11.84 kB / 429.1 MB, free: 32.11 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.003537/0.3277, allocations: 1.696 MB / 430.8 MB, free: 31.45 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.003881/0.3316, allocations: 1.986 MB / 432.8 MB, free: 30.37 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0003934/0.332, allocations: 0.5051 MB / 433.3 MB, free: 29.96 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0006192/0.3326, allocations: 297.6 kB / 433.6 MB, free: 29.86 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.008936/0.3416, allocations: 5.011 MB / 438.6 MB, free: 28.09 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 6.05e-05/0.3416, allocations: 3.375 kB / 438.6 MB, free: 28.09 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0002292/0.3419, allocations: 114.4 kB / 438.7 MB, free: 28 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0004182/0.3423, allocations: 473.2 kB / 439.2 MB, free: 27.8 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.01005/0.3523, allocations: 9.176 MB / 448.4 MB, free: 18.62 MB / 330.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.03135/0.3837, allocations: 20.45 MB / 468.8 MB, free: 14.12 MB / 346.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.004243/0.3879, allocations: 1.823 MB / 470.6 MB, free: 12.3 MB / 346.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.00332/0.3912, allocations: 1.386 MB / 472 MB, free: 10.91 MB / 346.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.02324/0.4145, allocations: 11.13 MB / 483.1 MB, free: 15.87 MB / 362.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 5.444e-05/0.4145, allocations: 50.7 kB / 483.2 MB, free: 15.81 MB / 362.7 MB
Notification: Performance of pre-optimization done (n=188): time 3.717e-06/0.4145, allocations: 0 / 483.2 MB, free: 15.81 MB / 362.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 3.0119445299496874]