Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleForwardReaction.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001842/0.001842, allocations: 85.48 kB / 19.44 MB, free: 344 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002024/0.002024, allocations: 173.2 kB / 22.76 MB, free: 1.664 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.602/1.602, allocations: 177.1 MB / 203.1 MB, free: 5.262 MB / 186.7 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1738/0.1738, allocations: 17.44 MB / 277 MB, free: 11.46 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Examples.SimpleForwardReaction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleForwardReaction") translateModel(Chemical.Examples.SimpleForwardReaction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.SimpleForwardReaction") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.843e-06/1.843e-06, allocations: 0 / 352.8 MB, free: 10.21 MB / 282.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 3.009e-05/3.193e-05, allocations: 6.25 kB / 352.8 MB, free: 10.21 MB / 282.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleForwardReaction): time 0.04837/0.0484, allocations: 30.78 MB / 383.6 MB, free: 11.55 MB / 314.7 MB Notification: Performance of NFInst.instExpressions: time 0.0194/0.0678, allocations: 10.13 MB / 393.7 MB, free: 1.379 MB / 314.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.002168/0.06997, allocations: 55.56 kB / 393.8 MB, free: 1.324 MB / 314.7 MB Notification: Performance of NFTyping.typeComponents: time 0.005477/0.07545, allocations: 1.857 MB / 395.6 MB, free: 15.46 MB / 330.7 MB Notification: Performance of NFTyping.typeBindings: time 0.004504/0.07995, allocations: 1.222 MB / 396.8 MB, free: 14.23 MB / 330.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.008553/0.08851, allocations: 3.348 MB / 400.2 MB, free: 10.86 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter forwardReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter forwardReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter forwardReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter forwardReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter forwardReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter forwardReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter forwardReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.00551/0.09402, allocations: 2.593 MB / 402.8 MB, free: 8.262 MB / 330.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0008869/0.0949, allocations: 419.5 kB / 403.2 MB, free: 7.809 MB / 330.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.002595/0.0975, allocations: 1.438 MB / 404.6 MB, free: 6.367 MB / 330.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.002036/0.09953, allocations: 1.126 MB / 405.8 MB, free: 5.238 MB / 330.7 MB Notification: Performance of NFPackage.collectConstants: time 0.0003599/0.09989, allocations: 212 kB / 406 MB, free: 5.031 MB / 330.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.004667/0.1046, allocations: 1.454 MB / 407.4 MB, free: 3.574 MB / 330.7 MB Notification: Performance of NFScalarize.scalarize: time 0.0008429/0.1054, allocations: 0.7515 MB / 408.2 MB, free: 2.82 MB / 330.7 MB Notification: Performance of NFVerifyModel.verify: time 0.001195/0.1066, allocations: 0.7947 MB / 409 MB, free: 2.023 MB / 330.7 MB Notification: Performance of NFConvertDAE.convert: time 0.1892/0.2958, allocations: 4.42 MB / 413.4 MB, free: 43.23 MB / 330.7 MB Notification: Performance of FrontEnd - DAE generated: time 8.405e-06/0.2958, allocations: 1.781 kB / 413.4 MB, free: 43.23 MB / 330.7 MB Notification: Performance of FrontEnd: time 1.703e-06/0.2958, allocations: 0 / 413.4 MB, free: 43.23 MB / 330.7 MB Notification: Performance of Transformations before backend: time 0.000144/0.2959, allocations: 0 / 413.4 MB, free: 43.23 MB / 330.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 623 * Number of variables: 623 Notification: Performance of Generate backend data structure: time 0.008659/0.3046, allocations: 3.407 MB / 416.8 MB, free: 41.79 MB / 330.7 MB Notification: Performance of prepare preOptimizeDAE: time 4.927e-05/0.3046, allocations: 10.33 kB / 416.8 MB, free: 41.79 MB / 330.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002488/0.3071, allocations: 0.985 MB / 417.8 MB, free: 41.61 MB / 330.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.004328/0.3115, allocations: 1.503 MB / 419.3 MB, free: 41.19 MB / 330.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0004518/0.3119, allocations: 382.7 kB / 419.7 MB, free: 40.93 MB / 330.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0004914/0.3124, allocations: 202.3 kB / 419.9 MB, free: 40.93 MB / 330.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.006243/0.3186, allocations: 3.241 MB / 423.1 MB, free: 40.7 MB / 330.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 4.43e-05/0.3187, allocations: 2.875 kB / 423.1 MB, free: 40.7 MB / 330.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001812/0.3189, allocations: 81.53 kB / 423.2 MB, free: 40.7 MB / 330.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.000344/0.3192, allocations: 324.1 kB / 423.5 MB, free: 40.67 MB / 330.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.006853/0.3261, allocations: 5.973 MB / 429.5 MB, free: 40.02 MB / 330.7 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01799/0.3441, allocations: 11.82 MB / 441.3 MB, free: 29.55 MB / 330.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.001527/0.3456, allocations: 0.8646 MB / 442.2 MB, free: 28.74 MB / 330.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.0007395/0.3463, allocations: 456.3 kB / 442.6 MB, free: 28.33 MB / 330.7 MB Notification: Performance of preOpt evalFunc (simulation): time 0.006963/0.3533, allocations: 3.824 MB / 446.4 MB, free: 24.63 MB / 330.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.359e-05/0.3533, allocations: 49.12 kB / 446.5 MB, free: 24.58 MB / 330.7 MB Notification: Performance of pre-optimization done (n=78): time 2.384e-06/0.3533, allocations: 0 / 446.5 MB, free: 24.58 MB / 330.7 MB Notification: Performance of matching and sorting (n=92): time 0.007573/0.3609, allocations: 3.247 MB / 449.7 MB, free: 21.31 MB / 330.7 MB Notification: Performance of inlineWhenForInitialization (initialization): time 2.794e-05/0.3609, allocations: 60.41 kB / 449.8 MB, free: 21.24 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter forwardReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter forwardReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter forwardReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter forwardReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter forwardReaction.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter forwardReaction.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter forwardReaction.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter forwardReaction.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter forwardReaction.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter forwardReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter forwardReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter forwardReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.002232/0.3631, allocations: 1.987 MB / 451.8 MB, free: 19.23 MB / 330.7 MB Notification: Performance of collectPreVariables (initialization): time 8.584e-05/0.3632, allocations: 41.7 kB / 451.8 MB, free: 19.19 MB / 330.7 MB Notification: Performance of collectInitialEqns (initialization): time 0.0007699/0.364, allocations: 1.535 MB / 453.4 MB, free: 17.65 MB / 330.7 MB Notification: Performance of collectInitialBindings (initialization): time 0.0002246/0.3642, allocations: 364.5 kB / 453.7 MB, free: 17.3 MB / 330.7 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0005455/0.3648, allocations: 457 kB / 454.2 MB, free: 16.85 MB / 330.7 MB Notification: Performance of setup shared object (initialization): time 8.101e-05/0.3648, allocations: 476.8 kB / 454.6 MB, free: 16.38 MB / 330.7 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0007604/0.3656, allocations: 463.8 kB / 455.1 MB, free: 15.93 MB / 330.7 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.001144/0.3668, allocations: 1.6 MB / 456.7 MB, free: 13.84 MB / 330.7 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.002025/0.3688, allocations: 2.095 MB / 458.8 MB, free: 11.42 MB / 330.7 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 9.909e-06/0.3688, allocations: 8 kB / 458.8 MB, free: 11.41 MB / 330.7 MB Notification: Performance of matching and sorting (n=193) (initialization): time 0.004004/0.3728, allocations: 2.013 MB / 460.8 MB, free: 9.555 MB / 330.7 MB Notification: Performance of prepare postOptimizeDAE: time 4.145e-05/0.3728, allocations: 18.5 kB / 460.8 MB, free: 9.539 MB / 330.7 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.998e-05/0.3729, allocations: 24 kB / 460.8 MB, free: 9.516 MB / 330.7 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.0004118/0.3733, allocations: 152.2 kB / 461 MB, free: 9.371 MB / 330.7 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.00307/0.3763, allocations: 0.6253 MB / 461.6 MB, free: 8.781 MB / 330.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.002329/0.3787, allocations: 3.788 MB / 465.4 MB, free: 4.777 MB / 330.7 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001259/0.3799, allocations: 59.98 kB / 465.5 MB, free: 4.719 MB / 330.7 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0002056/0.3801, allocations: 198.5 kB / 465.6 MB, free: 4.527 MB / 330.7 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 107 * Number of states: 0 () * Number of discrete variables: 5 (forwardReaction.nextProducts[1].SelfClustering,forwardReaction.products[1].definition.SelfClustering,forwardReaction.products[1].definition.data.phase,substance.substanceDefinitionVar.SelfClustering,substance.substanceDefinitionVar.data.phase) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (191): * Single equations (assignments): 189 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,1,100.0%), (1,1,100.0%)} * Non-linear torn systems (#iteration vars, #inner vars): 0 systems Notification: Performance of prepare postOptimizeDAE: time 0.001341/0.3815, allocations: 462.4 kB / 466.1 MB, free: 4.094 MB / 330.7 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0004202/0.3819, allocations: 206.9 kB / 466.3 MB, free: 3.891 MB / 330.7 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.004048/0.3859, allocations: 2.173 MB / 468.5 MB, free: 1.797 MB / 330.7 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.018e-05/0.386, allocations: 10.08 kB / 468.5 MB, free: 1.789 MB / 330.7 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 7.184e-06/0.386, allocations: 7.984 kB / 468.5 MB, free: 1.781 MB / 330.7 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.15e-05/0.386, allocations: 3.984 kB / 468.5 MB, free: 1.777 MB / 330.7 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.007117/0.3931, allocations: 3.206 MB / 471.7 MB, free: 14.52 MB / 346.7 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 8.957e-06/0.3931, allocations: 4 kB / 471.7 MB, free: 14.52 MB / 346.7 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002609/0.3957, allocations: 344.5 kB / 472 MB, free: 14.2 MB / 346.7 MB Notification: Performance of postOpt tearingSystem (simulation): time 0.0002945/0.396, allocations: 102.5 kB / 472.1 MB, free: 14.1 MB / 346.7 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 7.013e-05/0.3961, allocations: 19.98 kB / 472.2 MB, free: 14.08 MB / 346.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.003915/0.4, allocations: 3.684 MB / 475.8 MB, free: 10.18 MB / 346.7 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.142e-05/0.4, allocations: 10.62 kB / 475.9 MB, free: 10.17 MB / 346.7 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.00408/0.4041, allocations: 1.548 MB / 477.4 MB, free: 8.566 MB / 346.7 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0005515/0.4046, allocations: 142.8 kB / 477.5 MB, free: 8.426 MB / 346.7 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002274/0.4049, allocations: 21.97 kB / 477.6 MB, free: 8.406 MB / 346.7 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0005612/0.4054, allocations: 19.98 kB / 477.6 MB, free: 8.387 MB / 346.7 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001834/0.4056, allocations: 63.2 kB / 477.6 MB, free: 8.328 MB / 346.7 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 6.579e-05/0.4057, allocations: 31.98 kB / 477.7 MB, free: 8.297 MB / 346.7 MB Notification: Performance of sorting global known variables: time 0.002119/0.4078, allocations: 1.067 MB / 478.7 MB, free: 7.234 MB / 346.7 MB Notification: Performance of sort global known variables: time 1e-07/0.4078, allocations: 0 / 478.7 MB, free: 7.234 MB / 346.7 MB Notification: Performance of remove unused functions: time 0.002852/0.4106, allocations: 487.6 kB / 479.2 MB, free: 6.758 MB / 346.7 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 10 * Number of states: 2 (substance.logn,substance1.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (83): * Single equations (assignments): 81 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,1,100.0%), (1,1,100.0%)} * Non-linear torn systems (#iteration vars, #inner vars): 0 systems Notification: Performance of Backend phase and start with SimCode phase: time 0.0009027/0.4115, allocations: 355.3 kB / 479.6 MB, free: 6.477 MB / 346.7 MB Notification: Performance of simCode: created initialization part: time 0.003707/0.4153, allocations: 1.532 MB / 481.1 MB, free: 5 MB / 346.7 MB Notification: Performance of simCode: created event and clocks part: time 4.278e-06/0.4153, allocations: 0 / 481.1 MB, free: 5 MB / 346.7 MB Notification: Performance of simCode: created simulation system equations: time 0.001439/0.4167, allocations: 0.7135 MB / 481.8 MB, free: 4.266 MB / 346.7 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.002245/0.4189, allocations: 393.1 kB / 482.2 MB, free: 3.926 MB / 346.7 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.009018/0.428, allocations: 3.895 MB / 486.1 MB, free: 15.99 MB / 362.7 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001758/0.4297, allocations: 1.167 MB / 487.3 MB, free: 14.8 MB / 362.7 MB Notification: Performance of simCode: alias equations: time 0.002042/0.4318, allocations: 0.5559 MB / 487.8 MB, free: 14.38 MB / 362.7 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0006119/0.4324, allocations: 187 kB / 488 MB, free: 14.21 MB / 362.7 MB Notification: Performance of SimCode: time 2.195e-06/0.4324, allocations: 1.75 kB / 488 MB, free: 14.21 MB / 362.7 MB Notification: Performance of Templates: time 0.05001/0.4824, allocations: 23.76 MB / 0.4998 GB, free: 7.5 MB / 378.7 MB " [Timeout remaining time 660] make -j1 -f Chemical_master_Chemical.Examples.SimpleForwardReaction.makefile [Timeout 660] (rm -f Chemical_master_Chemical.Examples.SimpleForwardReaction.pipe ; mkfifo Chemical_master_Chemical.Examples.SimpleForwardReaction.pipe ; head -c 1048576 < Chemical_master_Chemical.Examples.SimpleForwardReaction.pipe >> ../files/Chemical_master_Chemical.Examples.SimpleForwardReaction.sim & ./Chemical_master_Chemical.Examples.SimpleForwardReaction -abortSlowSimulation -alarm=240 -lv LOG_STATS > Chemical_master_Chemical.Examples.SimpleForwardReaction.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 6.091689128079452]