Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.EnzymeKinetics.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002366/0.002366, allocations: 81.5 kB / 19.44 MB, free: 344 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002742/0.002742, allocations: 173.2 kB / 22.76 MB, free: 1.664 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.627/1.627, allocations: 177.1 MB / 203.1 MB, free: 5.613 MB / 186.7 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1546/0.1546, allocations: 17.45 MB / 277 MB, free: 11.6 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Examples.EnzymeKinetics,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.EnzymeKinetics") translateModel(Chemical.Examples.EnzymeKinetics,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.EnzymeKinetics") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.444e-06/2.444e-06, allocations: 0 / 352.8 MB, free: 10.2 MB / 282.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 4.169e-05/4.413e-05, allocations: 8.922 kB / 352.8 MB, free: 10.2 MB / 282.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1586:5-1586:64:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.EnzymeKinetics): time 0.06017/0.06022, allocations: 41.66 MB / 394.5 MB, free: 0.6055 MB / 314.7 MB Notification: Performance of NFInst.instExpressions: time 0.0266/0.08681, allocations: 12.81 MB / 407.3 MB, free: 3.742 MB / 330.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.005369/0.09218, allocations: 138.9 kB / 407.4 MB, free: 3.605 MB / 330.7 MB Notification: Performance of NFTyping.typeComponents: time 0.009033/0.1012, allocations: 2.439 MB / 409.9 MB, free: 1.152 MB / 330.7 MB Notification: Performance of NFTyping.typeBindings: time 0.2158/0.3171, allocations: 2.584 MB / 412.4 MB, free: 33.14 MB / 330.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.0115/0.3286, allocations: 4.816 MB / 417.3 MB, free: 32.86 MB / 330.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.01293/0.3415, allocations: 6.725 MB / 424 MB, free: 31.07 MB / 330.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.002549/0.3441, allocations: 1.361 MB / 425.4 MB, free: 30.77 MB / 330.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.008814/0.3529, allocations: 3.919 MB / 429.3 MB, free: 29.69 MB / 330.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.005847/0.3587, allocations: 3.102 MB / 432.4 MB, free: 28.86 MB / 330.7 MB Notification: Performance of NFPackage.collectConstants: time 0.001498/0.3602, allocations: 0.6218 MB / 433 MB, free: 28.86 MB / 330.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.007508/0.3677, allocations: 2.359 MB / 435.4 MB, free: 28.57 MB / 330.7 MB Notification: Performance of NFScalarize.scalarize: time 0.001993/0.3697, allocations: 2.076 MB / 437.4 MB, free: 27.15 MB / 330.7 MB Notification: Performance of NFVerifyModel.verify: time 0.003948/0.3737, allocations: 2.227 MB / 439.7 MB, free: 26.04 MB / 330.7 MB Notification: Performance of NFConvertDAE.convert: time 0.01199/0.3857, allocations: 10.43 MB / 450.1 MB, free: 16.67 MB / 330.7 MB Notification: Performance of FrontEnd - DAE generated: time 4.699e-06/0.3857, allocations: 0 / 450.1 MB, free: 16.67 MB / 330.7 MB Notification: Performance of FrontEnd: time 1.453e-06/0.3857, allocations: 2.656 kB / 450.1 MB, free: 16.67 MB / 330.7 MB Notification: Performance of Transformations before backend: time 0.0002779/0.3859, allocations: 0 / 450.1 MB, free: 16.67 MB / 330.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 1844 * Number of variables: 1844 Notification: Performance of Generate backend data structure: time 0.0164/0.4023, allocations: 8.776 MB / 458.9 MB, free: 7.934 MB / 330.7 MB Notification: Performance of prepare preOptimizeDAE: time 3.929e-05/0.4024, allocations: 8.031 kB / 458.9 MB, free: 7.926 MB / 330.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.004615/0.407, allocations: 2.841 MB / 461.7 MB, free: 5.105 MB / 330.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.005685/0.4127, allocations: 3.581 MB / 465.3 MB, free: 1.684 MB / 330.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0004956/0.4132, allocations: 0.9486 MB / 466.2 MB, free: 0.6367 MB / 330.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0007501/0.4139, allocations: 0.5856 MB / 466.8 MB, free: 64 kB / 330.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.02027/0.4342, allocations: 9.234 MB / 476.1 MB, free: 6.828 MB / 346.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 0.0001178/0.4343, allocations: 3.469 kB / 476.1 MB, free: 6.828 MB / 346.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0005749/0.4349, allocations: 241.2 kB / 476.3 MB, free: 6.605 MB / 346.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001041/0.4359, allocations: 0.8217 MB / 477.1 MB, free: 5.781 MB / 346.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.02975/0.4657, allocations: 15.77 MB / 492.9 MB, free: 6.004 MB / 362.7 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.08706/0.5527, allocations: 37.42 MB / 0.5179 GB, free: 360 kB / 394.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.008043/0.5608, allocations: 3.365 MB / 0.5212 GB, free: 13 MB / 410.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.005998/0.5668, allocations: 2.583 MB / 0.5237 GB, free: 10.41 MB / 410.7 MB Notification: Performance of preOpt evalFunc (simulation): time 0.04158/0.6084, allocations: 15.94 MB / 0.5393 GB, free: 10.57 MB / 426.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 7.499e-05/0.6084, allocations: 61.95 kB / 0.5393 GB, free: 10.5 MB / 426.7 MB Notification: Performance of pre-optimization done (n=305): time 5.4e-06/0.6084, allocations: 0 / 0.5393 GB, free: 10.5 MB / 426.7 MB Notification: Performance of matching and sorting (n=424): time 0.3729/0.9814, allocations: 34.41 MB / 0.5729 GB, free: 146 MB / 442.7 MB Notification: Performance of inlineWhenForInitialization (initialization): time 6.446e-05/0.9814, allocations: 92.48 kB / 0.573 GB, free: 145.9 MB / 442.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[7] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[6] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[5] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[4] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[3] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[2] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow[1] has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.00528/0.9867, allocations: 3.788 MB / 0.5767 GB, free: 145.6 MB / 442.7 MB Notification: Performance of collectPreVariables (initialization): time 0.001353/0.9881, allocations: 85.47 kB / 0.5768 GB, free: 145.6 MB / 442.7 MB Notification: Performance of collectInitialEqns (initialization): time 0.002191/0.9903, allocations: 3.537 MB / 0.5802 GB, free: 144.6 MB / 442.7 MB Notification: Performance of collectInitialBindings (initialization): time 0.002191/0.9924, allocations: 1.586 MB / 0.5818 GB, free: 143.6 MB / 442.7 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.002818/0.9953, allocations: 1.412 MB / 0.5832 GB, free: 143.1 MB / 442.7 MB Notification: Performance of setup shared object (initialization): time 8.051e-05/0.9953, allocations: 483.3 kB / 0.5836 GB, free: 142.6 MB / 442.7 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.006278/1.002, allocations: 4.207 MB / 0.5877 GB, free: 141.5 MB / 442.7 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.007822/1.009, allocations: 6.15 MB / 0.5937 GB, free: 138.2 MB / 442.7 MB Notification: It was not possible to check the given initialization system for consistency symbolically, because the relevant equations are part of an algebraic loop. This is not supported yet. Notification: Performance of analyzeInitialSystem (initialization): time 0.5794/1.589, allocations: 99.84 MB / 0.6912 GB, free: 43.41 MB / 442.7 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 5.674e-05/1.589, allocations: 12 kB / 0.6912 GB, free: 43.39 MB / 442.7 MB Notification: Performance of matching and sorting (n=587) (initialization): time 0.02906/1.618, allocations: 12.38 MB / 0.7033 GB, free: 31 MB / 442.7 MB Notification: Performance of prepare postOptimizeDAE: time 5.977e-05/1.618, allocations: 24.06 kB / 0.7034 GB, free: 30.98 MB / 442.7 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0003692/1.618, allocations: 167.9 kB / 0.7035 GB, free: 30.81 MB / 442.7 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.02572/1.644, allocations: 4.936 MB / 0.7083 GB, free: 25.87 MB / 442.7 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01393/1.658, allocations: 1.779 MB / 0.7101 GB, free: 24.09 MB / 442.7 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.02017/1.678, allocations: 13.11 MB / 0.7229 GB, free: 10.61 MB / 442.7 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.007451/1.686, allocations: 267.7 kB / 0.7231 GB, free: 10.35 MB / 442.7 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.001944/1.688, allocations: 0.7302 MB / 0.7238 GB, free: 9.617 MB / 442.7 MB Warning: Assuming fixed start value for the following 1 variables: liquidWater.substance.dH:VARIABLE(fixed = true ) type: Real Warning: The initial conditions are over specified. The following 2 initial equations are redundant, so they are removed from the initialization system: chemicalReaction1.nextProducts[1].SelfClustering_dH = 0.0 chemicalReaction1.nextProducts[1].SelfClustering = false. Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 154 * Number of states: 0 () * Number of discrete variables: 12 (chemicalReaction.nextProducts[1].SelfClustering,chemicalReaction.processDefinition.SelfClustering,liquidWater.substanceDefinitionVar.SelfClustering,liquidWater.substanceDefinitionVar.data.phase,S.substanceDefinitionVar.SelfClustering,S.substanceDefinitionVar.data.phase,chemicalReaction1.products[1].definition.SelfClustering,chemicalReaction1.products[1].definition.data.phase,chemicalReaction1.nextProducts[1].SelfClustering,chemicalReaction1.substrates[1].definition.SelfClustering,chemicalReaction1.substrates[1].definition.data.phase,chemicalReaction.processDefinition.data.phase) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (425): * Single equations (assignments): 418 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 3 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,12,100.0%), (5,16,44.0%)} * Non-linear torn systems (#iteration vars, #inner vars): 2 systems {(9,26), (7,6)} Notification: Performance of prepare postOptimizeDAE: time 0.004092/1.692, allocations: 0.9552 MB / 0.7248 GB, free: 8.672 MB / 442.7 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.002813/1.694, allocations: 0.7271 MB / 0.7255 GB, free: 7.953 MB / 442.7 MB Error: Internal error IndexReduction.pantelidesIndexReduction failed! System is structurally singular and cannot be handled because the number of unassigned equations is larger than the number of states. Use -d=bltdump to get more information. Error: Internal error Transformation Module PFPlusExt index Reduction Method Pantelides failed! Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.2119/1.906, allocations: 9.711 MB / 0.735 GB, free: 138.4 MB / 442.7 MB Error: post-optimization module wrapFunctionCalls (simulation) failed. " [Timeout remaining time 658] [Calling sys.exit(0), Time elapsed: 4.431456818012521]