Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.GasSolubility_blood.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002035/0.002035, allocations: 85.48 kB / 19.44 MB, free: 340 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.00323/0.00323, allocations: 173.2 kB / 22.76 MB, free: 1.66 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.707/1.707, allocations: 177.1 MB / 203.1 MB, free: 5.613 MB / 186.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1489/0.1489, allocations: 17.37 MB / 276.9 MB, free: 11.67 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.GasSolubility_blood,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.GasSolubility_blood")
translateModel(Chemical.Obsolete.Examples.GasSolubility_blood,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.GasSolubility_blood") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.423e-06/1.423e-06, allocations: 0 / 352.7 MB, free: 10.35 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.897e-05/3.04e-05, allocations: 12.78 kB / 352.7 MB, free: 10.34 MB / 282.7 MB
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.GasSolubility_blood): time 0.009902/0.009932, allocations: 6.915 MB / 359.6 MB, free: 3.391 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.03191/0.04184, allocations: 21.82 MB / 381.4 MB, free: 13.49 MB / 314.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001126/0.04297, allocations: 19.81 kB / 381.4 MB, free: 13.47 MB / 314.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.001334/0.0443, allocations: 420.7 kB / 381.9 MB, free: 13.05 MB / 314.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.004987/0.04929, allocations: 1.683 MB / 383.5 MB, free: 11.36 MB / 314.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.008226/0.05751, allocations: 2.942 MB / 386.5 MB, free: 8.398 MB / 314.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003229/0.06074, allocations: 1.895 MB / 388.4 MB, free: 6.496 MB / 314.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001305/0.06205, allocations: 0.7859 MB / 389.2 MB, free: 5.691 MB / 314.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001775/0.06382, allocations: 1.213 MB / 390.4 MB, free: 4.477 MB / 314.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001365/0.06519, allocations: 0.7795 MB / 391.2 MB, free: 3.695 MB / 314.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003005/0.06549, allocations: 152 kB / 391.3 MB, free: 3.547 MB / 314.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.007428/0.07292, allocations: 2.218 MB / 393.5 MB, free: 1.324 MB / 314.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0005802/0.0735, allocations: 366.8 kB / 393.9 MB, free: 0.9648 MB / 314.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001145/0.07464, allocations: 0.5847 MB / 394.5 MB, free: 388 kB / 314.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.01155/0.08619, allocations: 4.522 MB / 399 MB, free: 11.84 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.799e-06/0.0862, allocations: 3.938 kB / 399 MB, free: 11.84 MB / 330.7 MB
Notification: Performance of FrontEnd: time 4.028e-06/0.0862, allocations: 4 kB / 399 MB, free: 11.83 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 2.804e-05/0.08623, allocations: 0 / 399 MB, free: 11.83 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 314
 * Number of variables: 314
Notification: Performance of Generate backend data structure: time 0.004523/0.09075, allocations: 2.227 MB / 401.2 MB, free: 9.559 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.295e-05/0.0908, allocations: 8.031 kB / 401.2 MB, free: 9.551 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002148/0.09294, allocations: 0.6343 MB / 401.9 MB, free: 8.914 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.00173/0.09467, allocations: 0.714 MB / 402.6 MB, free: 8.172 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000104/0.09478, allocations: 94.84 kB / 402.7 MB, free: 8.078 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002536/0.09503, allocations: 124.3 kB / 402.8 MB, free: 7.957 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.002937/0.09797, allocations: 1.53 MB / 404.3 MB, free: 6.383 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.026e-05/0.098, allocations: 4.125 kB / 404.3 MB, free: 6.379 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001433/0.09814, allocations: 52.38 kB / 404.4 MB, free: 6.328 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.578e-05/0.09818, allocations: 31.94 kB / 404.4 MB, free: 6.297 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.003738/0.1019, allocations: 1.977 MB / 406.4 MB, free: 4.312 MB / 330.7 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.1588/0.2607, allocations: 4.419 MB / 410.8 MB, free: 63.62 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.00378/0.2645, allocations: 1.823 MB / 412.6 MB, free: 63.55 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0007811/0.2653, allocations: 491.8 kB / 413.1 MB, free: 63.53 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.006319/0.2716, allocations: 2.924 MB / 416 MB, free: 62.58 MB / 330.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.575e-05/0.2716, allocations: 45.48 kB / 416.1 MB, free: 62.53 MB / 330.7 MB
Notification: Performance of pre-optimization done (n=72): time 2.535e-06/0.2716, allocations: 2.688 kB / 416.1 MB, free: 62.53 MB / 330.7 MB
Notification: Performance of matching and sorting (n=89): time 0.01496/0.2866, allocations: 3.332 MB / 419.4 MB, free: 61.48 MB / 330.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 3.475e-05/0.2866, allocations: 63.41 kB / 419.5 MB, free: 61.42 MB / 330.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.00117/0.2878, allocations: 1.156 MB / 420.6 MB, free: 60.94 MB / 330.7 MB
Notification: Performance of collectPreVariables (initialization): time 5.972e-05/0.2878, allocations: 41.61 kB / 420.7 MB, free: 60.9 MB / 330.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0003015/0.2881, allocations: 0.7959 MB / 421.5 MB, free: 60.34 MB / 330.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0001884/0.2883, allocations: 349.6 kB / 421.8 MB, free: 60.12 MB / 330.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003687/0.2887, allocations: 325.8 kB / 422.1 MB, free: 59.96 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 0.00011/0.2888, allocations: 0.546 MB / 422.7 MB, free: 59.44 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0005594/0.2894, allocations: 377 kB / 423 MB, free: 59.34 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0007818/0.2901, allocations: 1.087 MB / 424.1 MB, free: 58.32 MB / 330.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001429/0.2916, allocations: 1.55 MB / 425.7 MB, free: 57.09 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 9.118e-06/0.2916, allocations: 3.281 kB / 425.7 MB, free: 57.09 MB / 330.7 MB
Notification: Performance of matching and sorting (n=185) (initialization): time 0.004076/0.2956, allocations: 1.701 MB / 427.4 MB, free: 56.48 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 3.006e-05/0.2957, allocations: 12.19 kB / 427.4 MB, free: 56.48 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.697e-05/0.2957, allocations: 15 kB / 427.4 MB, free: 56.48 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.003185/0.2989, allocations: 393.2 kB / 427.8 MB, free: 56.26 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001071/0.3, allocations: 351.9 kB / 428.1 MB, free: 55.96 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.0048/0.3048, allocations: 4.819 MB / 433 MB, free: 51.08 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001172/0.3059, allocations: 45.97 kB / 433 MB, free: 51.04 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001307/0.3061, allocations: 88.34 kB / 433.1 MB, free: 50.96 MB / 330.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 71
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (179):
 * Single equations (assignments): 177
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(1,3,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.0004814/0.3065, allocations: 330.2 kB / 433.4 MB, free: 50.64 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.000252/0.3068, allocations: 127.3 kB / 433.5 MB, free: 50.51 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.003614/0.3104, allocations: 1.271 MB / 434.8 MB, free: 49.45 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.863e-06/0.3104, allocations: 11.94 kB / 434.8 MB, free: 49.44 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 4.077e-06/0.3104, allocations: 0 / 434.8 MB, free: 49.44 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.016e-05/0.3104, allocations: 3.047 kB / 434.8 MB, free: 49.44 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001239/0.3117, allocations: 1.011 MB / 435.8 MB, free: 48.4 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.878e-06/0.3117, allocations: 0 / 435.8 MB, free: 48.4 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0006129/0.3123, allocations: 175.8 kB / 436 MB, free: 48.23 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.003063/0.3154, allocations: 373.4 kB / 436.4 MB, free: 47.86 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 7.467e-05/0.3154, allocations: 31.98 kB / 436.4 MB, free: 47.83 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.004255/0.3197, allocations: 4.71 MB / 441.1 MB, free: 42.88 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.074e-06/0.3197, allocations: 4 kB / 441.1 MB, free: 42.88 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003885/0.3236, allocations: 1.7 MB / 442.8 MB, free: 41.14 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0002787/0.3238, allocations: 99.22 kB / 442.9 MB, free: 41.04 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001438/0.324, allocations: 35.86 kB / 442.9 MB, free: 41.01 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.000516/0.3245, allocations: 20 kB / 443 MB, free: 40.99 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001611/0.3247, allocations: 72.86 kB / 443 MB, free: 40.91 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 6.194e-05/0.3247, allocations: 39.98 kB / 443.1 MB, free: 40.88 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0006159/0.3253, allocations: 0.6903 MB / 443.8 MB, free: 40.19 MB / 330.7 MB
Notification: Performance of sort global known variables: time 7e-08/0.3253, allocations: 0 / 443.8 MB, free: 40.19 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.002239/0.3276, allocations: 0.8495 MB / 444.6 MB, free: 39.44 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 5
 * Number of states: 5 (blood_plasma.temperature,CO2_unbound_plasma.logn,O2_unbound_plasma.logn,water.logn,others.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (93):
 * Single equations (assignments): 91
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(1,3,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0017/0.3293, allocations: 1.061 MB / 445.7 MB, free: 38.51 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.002021/0.3313, allocations: 1.424 MB / 447.1 MB, free: 37.05 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 4.749e-06/0.3313, allocations: 2 kB / 447.1 MB, free: 37.05 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0008831/0.3322, allocations: 0.8077 MB / 447.9 MB, free: 36.21 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001236/0.3334, allocations: 256.6 kB / 448.2 MB, free: 35.97 MB / 330.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.002817/0.3362, allocations: 2.099 MB / 450.3 MB, free: 33.82 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003239/0.3366, allocations: 500 kB / 450.7 MB, free: 33.3 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0007701/0.3373, allocations: 263.8 kB / 451 MB, free: 33.05 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002893/0.3376, allocations: 167.9 kB / 451.2 MB, free: 32.88 MB / 330.7 MB
Notification: Performance of SimCode: time 9.52e-07/0.3376, allocations: 0 / 451.2 MB, free: 32.88 MB / 330.7 MB
Notification: Performance of Templates: time 0.03439/0.372, allocations: 28.99 MB / 480.2 MB, free: 4.113 MB / 330.7 MB
"
[Timeout remaining time 660]
make -j1 -f Chemical_Chemical.Obsolete.Examples.GasSolubility_blood.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.GasSolubility_blood.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.GasSolubility_blood.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.GasSolubility_blood.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.GasSolubility_blood.sim & ./Chemical_Chemical.Obsolete.Examples.GasSolubility_blood -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.GasSolubility_blood.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 6.251431614044122]