Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo): time 0.09704/0.09704, allocations: 11.16 MB / 30.51 MB, free: 4.918 MB / 24.77 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001934/0.001934, allocations: 91.83 kB / 38.14 MB, free: 7.199 MB / 33.03 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002357/0.002357, allocations: 156.5 kB / 45.85 MB, free: 10.6 MB / 44.04 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.482/1.482, allocations: 177.1 MB / 230.6 MB, free: 4.785 MB / 202.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo): time 0.1484/0.1484, allocations: 17.63 MB / 309.1 MB, free: 8.809 MB / 282.7 MB
"
[Timeout remaining time 180]
Using package Physiolibrary with version 3.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Using package Chemical with version 1.4.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo)
Running command: translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary")
translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.383e-06/1.383e-06, allocations: 0 / 390.5 MB, free: 46.54 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.884e-05/2.022e-05, allocations: 5.922 kB / 390.5 MB, free: 46.53 MB / 330.7 MB
Notification: Performance of NFInst.instantiate(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary): time 0.3829/0.383, allocations: 194.7 MB / 0.5714 GB, free: 10.88 MB / 426.7 MB
Notification: Performance of NFInst.instExpressions: time 0.1483/0.5312, allocations: 110.3 MB / 0.6792 GB, free: 4.793 MB / 490.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.009331/0.5405, allocations: 151.2 kB / 0.6793 GB, free: 4.645 MB / 490.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.01281/0.5534, allocations: 3.301 MB / 0.6826 GB, free: 1.32 MB / 490.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.0412/0.5945, allocations: 12.72 MB / 0.695 GB, free: 4.531 MB / 0.4948 GB
Notification: Performance of NFTyping.typeClassSections: time 0.0521/0.6467, allocations: 19.52 MB / 0.714 GB, free: 0.9219 MB / 0.5105 GB
Notification: Performance of NFFlatten.flatten: time 0.2677/0.9143, allocations: 22.61 MB / 0.7361 GB, free: 7.672 MB / 0.5105 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.04049/0.9548, allocations: 23.71 MB / 0.7593 GB, free: 21.61 MB / 0.5261 GB
Notification: Performance of NFEvalConstants.evaluate: time 3.616/4.571, allocations: 0.5791 GB / 1.338 GB, free: 78.81 MB / 0.6823 GB
Notification: Performance of NFSimplifyModel.simplify: time 1.254/5.825, allocations: 208.4 MB / 1.542 GB, free: 112.1 MB / 0.6823 GB
Notification: Performance of NFPackage.collectConstants: time 0.01201/5.837, allocations: 3.97 MB / 1.546 GB, free: 110.5 MB / 0.6823 GB
Notification: Performance of NFFlatten.collectFunctions: time 6.4/12.24, allocations: 0.9761 GB / 2.522 GB, free: 92.52 MB / 0.6823 GB
Notification: Performance of NFScalarize.scalarize: time 0.02467/12.26, allocations: 20.39 MB / 2.542 GB, free: 89.02 MB / 0.6823 GB
Notification: Performance of NFVerifyModel.verify: time 0.03491/12.3, allocations: 16.87 MB / 2.558 GB, free: 79.65 MB / 0.6823 GB
Notification: Performance of NFConvertDAE.convert: time 0.1091/12.41, allocations: 82.22 MB / 2.639 GB, free: 2.258 MB / 0.6823 GB
Notification: Performance of FrontEnd - DAE generated: time 5.931e-06/12.41, allocations: 0 / 2.639 GB, free: 2.258 MB / 0.6823 GB
Notification: Performance of FrontEnd: time 1.512e-06/12.41, allocations: 0 / 2.639 GB, free: 2.258 MB / 0.6823 GB
Notification: Performance of Transformations before backend: time 0.001679/12.41, allocations: 4 kB / 2.639 GB, free: 2.254 MB / 0.6823 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 8166
 * Number of variables: 8166
Notification: Performance of Generate backend data structure: time 0.404/12.81, allocations: 36.55 MB / 2.674 GB, free: 332.6 MB / 0.6824 GB
Notification: Performance of prepare preOptimizeDAE: time 4.222e-05/12.81, allocations: 8.031 kB / 2.674 GB, free: 332.6 MB / 0.6824 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.03112/12.84, allocations: 6.94 MB / 2.681 GB, free: 325.6 MB / 0.6824 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.03971/12.88, allocations: 18.96 MB / 2.7 GB, free: 306.9 MB / 0.6824 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002816/12.89, allocations: 2.736 MB / 2.702 GB, free: 304.2 MB / 0.6824 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0106/12.9, allocations: 2.807 MB / 2.705 GB, free: 301.4 MB / 0.6824 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.1234/13.02, allocations: 81.08 MB / 2.784 GB, free: 218.6 MB / 0.6824 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001202/13.02, allocations: 123 kB / 2.784 GB, free: 218.5 MB / 0.6824 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.009419/13.03, allocations: 1.125 MB / 2.785 GB, free: 217.3 MB / 0.6824 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001301/13.03, allocations: 1.598 MB / 2.787 GB, free: 215.7 MB / 0.6824 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1393/13.17, allocations: 119.4 MB / 2.903 GB, free: 96.33 MB / 0.6824 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.6649/13.84, allocations: 263.7 MB / 3.161 GB, free: 157.8 MB / 0.6825 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.05708/13.89, allocations: 47.52 MB / 3.207 GB, free: 110.9 MB / 0.6825 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.04439/13.94, allocations: 37.56 MB / 3.244 GB, free: 73.29 MB / 0.6825 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.5202/14.46, allocations: 124.5 MB / 3.366 GB, free: 274.8 MB / 0.6828 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002104/14.46, allocations: 271.7 kB / 3.366 GB, free: 274.6 MB / 0.6828 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.03324/14.49, allocations: 6.838 MB / 3.373 GB, free: 273.8 MB / 0.6828 GB
Notification: Performance of pre-optimization done (n=3087): time 6.239e-05/14.49, allocations: 0 / 3.373 GB, free: 273.8 MB / 0.6828 GB
Notification: Performance of matching and sorting (n=3087): time 0.2614/14.75, allocations: 132.9 MB / 3.502 GB, free: 153.6 MB / 0.6828 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001669/14.75, allocations: 281.1 kB / 3.503 GB, free: 153.3 MB / 0.6828 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.02336/14.78, allocations: 16.16 MB / 3.518 GB, free: 137.6 MB / 0.6828 GB
Notification: Performance of collectPreVariables (initialization): time 0.005805/14.78, allocations: 417.7 kB / 3.519 GB, free: 137.2 MB / 0.6828 GB
Notification: Performance of collectInitialEqns (initialization): time 0.00731/14.79, allocations: 11.84 MB / 3.53 GB, free: 127.1 MB / 0.6828 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01299/14.8, allocations: 11.01 MB / 3.541 GB, free: 117.3 MB / 0.6828 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.02484/14.83, allocations: 7.663 MB / 3.549 GB, free: 109.6 MB / 0.6828 GB
Notification: Performance of setup shared object (initialization): time 3.531e-05/14.83, allocations: 301.1 kB / 3.549 GB, free: 109.3 MB / 0.6828 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.04781/14.87, allocations: 39.74 MB / 3.588 GB, free: 69.51 MB / 0.6828 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.242/15.12, allocations: 50.97 MB / 3.637 GB, free: 274.3 MB / 0.6828 GB
Notification: Performance of analyzeInitialSystem (initialization): time 2.077/17.19, allocations: 353.6 MB / 3.983 GB, free: 185.8 MB / 0.6828 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004356/17.19, allocations: 103.8 kB / 3.983 GB, free: 185.7 MB / 0.6828 GB
Notification: Performance of matching and sorting (n=4958) (initialization): time 0.2093/17.4, allocations: 103.3 MB / 4.084 GB, free: 83.37 MB / 0.6828 GB
Notification: Performance of prepare postOptimizeDAE: time 0.000509/17.4, allocations: 157.1 kB / 4.084 GB, free: 83.22 MB / 0.6828 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0005623/17.4, allocations: 344 kB / 4.084 GB, free: 82.88 MB / 0.6828 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.4058/17.81, allocations: 21.12 MB / 4.105 GB, free: 279.2 MB / 0.6828 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0303/17.84, allocations: 7.846 MB / 4.113 GB, free: 279.1 MB / 0.6828 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.01689/17.86, allocations: 19.45 MB / 4.132 GB, free: 269.1 MB / 0.6828 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.02764/17.88, allocations: 1.697 MB / 4.133 GB, free: 269.1 MB / 0.6828 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.00823/17.89, allocations: 2.485 MB / 4.136 GB, free: 268.9 MB / 0.6828 GB
Warning: Assuming fixed start value for the following 18 variables:
         pulmonaryArteries.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[1]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[2]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[3]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[1]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[2]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[3]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1571
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (4024):
 * Single equations (assignments): 3985
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 20
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,3), (4,28), (1,1), (1,3), (5,10), (1,3), (1,1), (6,9), (1,3), (6,9), (1,3), (1,2), (5,10), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.02506/17.92, allocations: 10.73 MB / 4.146 GB, free: 264.8 MB / 0.6828 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01356/17.93, allocations: 2.556 MB / 4.149 GB, free: 264.6 MB / 0.6828 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.223/18.15, allocations: 96.06 MB / 4.242 GB, free: 180.4 MB / 0.6828 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.1668/18.32, allocations: 80.87 MB / 4.321 GB, free: 99.44 MB / 0.6828 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 6.893e-05/18.32, allocations: 0 / 4.321 GB, free: 99.44 MB / 0.6828 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0005539/18.32, allocations: 119.5 kB / 4.321 GB, free: 99.32 MB / 0.6828 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.4908/18.81, allocations: 147.2 MB / 4.465 GB, free: 225.6 MB / 0.6828 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001972/18.81, allocations: 3.5 kB / 4.465 GB, free: 225.6 MB / 0.6828 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.02664/18.84, allocations: 5.511 MB / 4.471 GB, free: 220.1 MB / 0.6828 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1737/19.01, allocations: 17.91 MB / 4.488 GB, free: 202.8 MB / 0.6828 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.005951/19.02, allocations: 0.9527 MB / 4.489 GB, free: 201.8 MB / 0.6828 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.01405/19.03, allocations: 18.57 MB / 4.507 GB, free: 182.8 MB / 0.6828 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.518e-06/19.03, allocations: 0 / 4.507 GB, free: 182.8 MB / 0.6828 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.4877/19.52, allocations: 152.7 MB / 4.656 GB, free: 269.8 MB / 0.6828 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02414/19.54, allocations: 8.376 MB / 4.664 GB, free: 267.6 MB / 0.6828 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.00946/19.55, allocations: 0.6788 MB / 4.665 GB, free: 267.1 MB / 0.6828 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.02024/19.57, allocations: 1.102 MB / 4.666 GB, free: 266.8 MB / 0.6828 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.008553/19.58, allocations: 2.555 MB / 4.669 GB, free: 266.4 MB / 0.6828 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.005997/19.59, allocations: 1.401 MB / 4.67 GB, free: 266.2 MB / 0.6828 GB
Notification: Performance of sorting global known variables: time 0.01767/19.61, allocations: 10.28 MB / 4.68 GB, free: 262.9 MB / 0.6828 GB
Notification: Performance of sort global known variables: time 1.81e-07/19.61, allocations: 0 / 4.68 GB, free: 262.9 MB / 0.6828 GB
Notification: Performance of remove unused functions: time 0.04652/19.65, allocations: 14.95 MB / 4.695 GB, free: 255.3 MB / 0.6828 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 1
 * Number of states: 263 (pulmonaryArteries.enthalpy,pulmonaryArteries.extraSubstanceAmounts[1],pulmonaryArteries.extraSubstanceAmounts[2],pulmonaryArteries.extraSubstanceAmounts[3],pulmonaryArteries.substanceMasses[1],pulmonaryArteries.substanceMasses[2],pulmonaryArteries.substanceMasses[3],pulmonaryArteries.substanceMasses[4],pulmonaryArteries.substanceMasses[5],pulmonaryArteries.substanceMasses[6],pulmonaryArteries.substanceMasses[7],pulmonaryArteries.substanceMasses[8],pulmonaryArteries.substanceMasses[9],pulmonaryArteries.substanceMasses[10],pulmonaryArteries.substanceMasses[11],pulmonaryArteries.substanceMasses[12],pulmonaryArteries.substanceMasses[13],pulmonaryArteries.substanceMasses[14],pulmonaryArteries.substanceMasses[15],pulmonaryArteries.substanceMasses[16],pulmonaryArteries.substanceMasses[17],pulmonaryArteries.substanceMasses[18],pulmonaryArteries.substanceMasses[19],pulmonaryArteries.substanceMasses[20],pulmonaryArteries.substanceMasses[21],pulmonaryArteries.substanceMasses[22],pulmonaryArteries.substanceMasses[23],pulmonaryArteries.substanceMasses[24],pulmonaryArteries.substanceMasses[25],pulmonaryArteries.substanceMasses[26],pulmonaryArteries.substanceMasses[27],pulmonaryArteries.substanceMasses[28],pulmonaryArteries.substanceMasses[29],pulmonaryArteries.substanceMasses[30],pulmonaryArteries.substanceMasses[31],pulmonaryArteries.substanceMasses[32],pulmonaryArteries.substanceMasses[33],pulmonaryArteries.substanceMasses[34],pulmonaryArteries.substanceMasses[35],pulmonaryArteries.substanceMasses[36],pulmonaryArteries.substanceMasses[37],pulmonaryArteries.substanceMasses[38],pulmonaryArteries.substanceMasses[39],pulmonaryVeins.enthalpy,pulmonaryVeins.extraSubstanceAmounts[1],pulmonaryVeins.extraSubstanceAmounts[2],pulmonaryVeins.extraSubstanceAmounts[3],pulmonaryVeins.substanceMasses[1],pulmonaryVeins.substanceMasses[2],pulmonaryVeins.substanceMasses[3],pulmonaryVeins.substanceMasses[4],pulmonaryVeins.substanceMasses[5],pulmonaryVeins.substanceMasses[6],pulmonaryVeins.substanceMasses[7],pulmonaryVeins.substanceMasses[8],pulmonaryVeins.substanceMasses[9],pulmonaryVeins.substanceMasses[10],pulmonaryVeins.substanceMasses[11],pulmonaryVeins.substanceMasses[12],pulmonaryVeins.substanceMasses[13],pulmonaryVeins.substanceMasses[14],pulmonaryVeins.substanceMasses[15],pulmonaryVeins.substanceMasses[16],pulmonaryVeins.substanceMasses[17],pulmonaryVeins.substanceMasses[18],pulmonaryVeins.substanceMasses[19],pulmonaryVeins.substanceMasses[20],pulmonaryVeins.substanceMasses[21],pulmonaryVeins.substanceMasses[22],pulmonaryVeins.substanceMasses[23],pulmonaryVeins.substanceMasses[24],pulmonaryVeins.substanceMasses[25],pulmonaryVeins.substanceMasses[26],pulmonaryVeins.substanceMasses[27],pulmonaryVeins.substanceMasses[28],pulmonaryVeins.substanceMasses[29],pulmonaryVeins.substanceMasses[30],pulmonaryVeins.substanceMasses[31],pulmonaryVeins.substanceMasses[32],pulmonaryVeins.substanceMasses[33],pulmonaryVeins.substanceMasses[34],pulmonaryVeins.substanceMasses[35],pulmonaryVeins.substanceMasses[36],pulmonaryVeins.substanceMasses[37],pulmonaryVeins.substanceMasses[38],pulmonaryVeins.substanceMasses[39],systemicArteries.chemicalSolution.substanceMasses[1],systemicArteries.chemicalSolution.substanceMasses[2],systemicArteries.chemicalSolution.substanceMasses[3],systemicArteries.chemicalSolution.substanceMasses[4],systemicArteries.chemicalSolution.substanceMasses[5],systemicArteries.chemicalSolution.substanceMasses[6],systemicArteries.chemicalSolution.substanceMasses[7],systemicArteries.chemicalSolution.substanceMasses[8],systemicArteries.chemicalSolution.substanceMasses[9],systemicArteries.chemicalSolution.substanceMasses[10],systemicArteries.chemicalSolution.substanceMasses[11],systemicArteries.chemicalSolution.substanceMasses[12],systemicArteries.chemicalSolution.substanceMasses[13],systemicArteries.chemicalSolution.substanceMasses[14],systemicArteries.chemicalSolution.substanceMasses[15],systemicArteries.chemicalSolution.substanceMasses[16],systemicArteries.chemicalSolution.substanceMasses[17],systemicArteries.chemicalSolution.substanceMasses[18],systemicArteries.chemicalSolution.substanceMasses[19],systemicArteries.chemicalSolution.substanceMasses[20],systemicArteries.chemicalSolution.substanceMasses[21],systemicArteries.chemicalSolution.substanceMasses[22],systemicArteries.chemicalSolution.substanceMasses[23],systemicArteries.chemicalSolution.substanceMasses[24],systemicArteries.chemicalSolution.substanceMasses[25],systemicArteries.chemicalSolution.substanceMasses[26],systemicArteries.chemicalSolution.substanceMasses[27],systemicArteries.chemicalSolution.substanceMasses[28],systemicArteries.chemicalSolution.substanceMasses[29],systemicArteries.chemicalSolution.substanceMasses[30],systemicArteries.chemicalSolution.substanceMasses[31],systemicArteries.chemicalSolution.substanceMasses[32],systemicArteries.chemicalSolution.substanceMasses[33],systemicArteries.chemicalSolution.substanceMasses[34],systemicArteries.chemicalSolution.substanceMasses[35],systemicArteries.chemicalSolution.substanceMasses[36],systemicArteries.chemicalSolution.substanceMasses[37],systemicArteries.chemicalSolution.substanceMasses[38],systemicArteries.chemicalSolution.substanceMasses[39],systemicArteries.enthalpy,systemicArteries.extraSubstanceAmounts[1],systemicArteries.extraSubstanceAmounts[2],systemicArteries.extraSubstanceAmounts[3],systemicVeins.chemicalSolution.substanceMasses[1],systemicVeins.chemicalSolution.substanceMasses[2],systemicVeins.chemicalSolution.substanceMasses[3],systemicVeins.chemicalSolution.substanceMasses[4],systemicVeins.chemicalSolution.substanceMasses[5],systemicVeins.chemicalSolution.substanceMasses[6],systemicVeins.chemicalSolution.substanceMasses[7],systemicVeins.chemicalSolution.substanceMasses[8],systemicVeins.chemicalSolution.substanceMasses[9],systemicVeins.chemicalSolution.substanceMasses[10],systemicVeins.chemicalSolution.substanceMasses[11],systemicVeins.chemicalSolution.substanceMasses[12],systemicVeins.chemicalSolution.substanceMasses[13],systemicVeins.chemicalSolution.substanceMasses[14],systemicVeins.chemicalSolution.substanceMasses[15],systemicVeins.chemicalSolution.substanceMasses[16],systemicVeins.chemicalSolution.substanceMasses[17],systemicVeins.chemicalSolution.substanceMasses[18],systemicVeins.chemicalSolution.substanceMasses[19],systemicVeins.chemicalSolution.substanceMasses[20],systemicVeins.chemicalSolution.substanceMasses[21],systemicVeins.chemicalSolution.substanceMasses[22],systemicVeins.chemicalSolution.substanceMasses[23],systemicVeins.chemicalSolution.substanceMasses[24],systemicVeins.chemicalSolution.substanceMasses[25],systemicVeins.chemicalSolution.substanceMasses[26],systemicVeins.chemicalSolution.substanceMasses[27],systemicVeins.chemicalSolution.substanceMasses[28],systemicVeins.chemicalSolution.substanceMasses[29],systemicVeins.chemicalSolution.substanceMasses[30],systemicVeins.chemicalSolution.substanceMasses[31],systemicVeins.chemicalSolution.substanceMasses[32],systemicVeins.chemicalSolution.substanceMasses[33],systemicVeins.chemicalSolution.substanceMasses[34],systemicVeins.chemicalSolution.substanceMasses[35],systemicVeins.chemicalSolution.substanceMasses[36],systemicVeins.chemicalSolution.substanceMasses[37],systemicVeins.chemicalSolution.substanceMasses[38],systemicVeins.chemicalSolution.substanceMasses[39],systemicVeins.enthalpy,systemicVeins.extraSubstanceAmounts[1],systemicVeins.extraSubstanceAmounts[2],systemicVeins.extraSubstanceAmounts[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[1],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[2],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[4],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[5],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[6],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[7],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[8],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[9],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[10],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[11],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[12],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[13],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[14],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[15],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[16],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[17],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[18],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[19],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[20],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[21],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[22],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[23],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[24],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[25],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[26],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[27],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[28],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[29],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[30],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[31],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[32],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[33],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[34],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[35],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[36],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[37],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[38],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[39],respiratoryUnit[1].pulmCapysVentilated.enthalpy,respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[1],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[2],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[4],respiratoryUnit[1].alveoli.enthalpy,tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[1],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[2],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[3],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[4],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[5],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[6],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[7],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[8],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[9],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[10],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[11],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[12],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[13],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[14],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[15],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[16],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[17],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[18],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[19],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[20],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[21],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[22],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[23],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[24],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[25],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[26],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[27],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[28],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[29],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[30],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[31],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[32],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[33],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[34],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[35],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[36],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[37],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[38],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[39],tissueUnit[1].systemicCapillaries.enthalpy,tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (2862):
 * Single equations (assignments): 2823
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 20
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,4), (4,35), (1,1), (1,4), (6,10), (1,4), (1,1), (6,10), (1,4), (6,10), (1,4), (1,3), (5,11), (1,4)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.02432/19.68, allocations: 9.964 MB / 4.704 GB, free: 249.1 MB / 0.6828 GB
Notification: Performance of simCode: created initialization part: time 0.1147/19.79, allocations: 87.37 MB / 4.79 GB, free: 165.9 MB / 0.6828 GB
Notification: Performance of simCode: created event and clocks part: time 7.244e-06/19.79, allocations: 0 / 4.79 GB, free: 165.9 MB / 0.6828 GB
Notification: Performance of simCode: created simulation system equations: time 0.05337/19.85, allocations: 41.31 MB / 4.83 GB, free: 124.5 MB / 0.6828 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.07183/19.92, allocations: 15.51 MB / 4.845 GB, free: 110.1 MB / 0.6828 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.3741/20.29, allocations: 114.8 MB / 4.957 GB, free: 230.5 MB / 0.6828 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.03477/20.33, allocations: 17.9 MB / 4.975 GB, free: 222.2 MB / 0.6828 GB
Notification: Performance of simCode: alias equations: time 0.04751/20.37, allocations: 18.01 MB / 4.992 GB, free: 209.2 MB / 0.6828 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.01424/20.39, allocations: 2.817 MB / 4.995 GB, free: 206.6 MB / 0.6828 GB
Notification: Performance of SimCode: time 1.253e-06/20.39, allocations: 0 / 4.995 GB, free: 206.6 MB / 0.6828 GB
Notification: Performance of Templates: time 1.573/21.96, allocations: 0.8064 GB / 5.802 GB, free: 74.6 MB / 0.6828 GB
"
[Timeout remaining time 638]
make -j1 -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.makefile [Timeout 660]
(rm -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe ; mkfifo Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe >> ../files/Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.sim & ./Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 63.040595975006]