Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001829/0.001829, allocations: 88.72 kB / 19.44 MB, free: 356 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002534/0.002534, allocations: 157.7 kB / 22.75 MB, free: 1.684 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.606/1.606, allocations: 177.1 MB / 203.1 MB, free: 5.609 MB / 186.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1707/0.1707, allocations: 17.45 MB / 277 MB, free: 11.6 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG")
translateModel(Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.295e-06/2.295e-06, allocations: 0 / 352.8 MB, free: 10.19 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 3.843e-05/4.073e-05, allocations: 2.312 kB / 352.8 MB, free: 10.19 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:12638:6-12638:65:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:12638:6-12638:65:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG): time 0.05918/0.05922, allocations: 24.36 MB / 377.2 MB, free: 1.973 MB / 298.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01304/0.07225, allocations: 5.557 MB / 382.7 MB, free: 12.39 MB / 314.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.00043/0.07268, allocations: 11.88 kB / 382.7 MB, free: 12.38 MB / 314.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.000643/0.07333, allocations: 142.8 kB / 382.9 MB, free: 12.24 MB / 314.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.001004/0.07433, allocations: 273.8 kB / 383.2 MB, free: 11.97 MB / 314.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.003159/0.07749, allocations: 1.013 MB / 384.2 MB, free: 10.95 MB / 314.7 MB
Notification: Performance of NFFlatten.flatten: time 0.001008/0.0785, allocations: 0.5213 MB / 384.7 MB, free: 10.43 MB / 314.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0004339/0.07893, allocations: 169.1 kB / 384.9 MB, free: 10.26 MB / 314.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0005819/0.07951, allocations: 327.3 kB / 385.2 MB, free: 9.938 MB / 314.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0004888/0.08, allocations: 223.5 kB / 385.4 MB, free: 9.719 MB / 314.7 MB
Notification: Performance of NFPackage.collectConstants: time 9.675e-05/0.0801, allocations: 28 kB / 385.4 MB, free: 9.691 MB / 314.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.001473/0.08157, allocations: 0.5224 MB / 385.9 MB, free: 9.168 MB / 314.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0001629/0.08173, allocations: 99.66 kB / 386 MB, free: 9.07 MB / 314.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0002291/0.08196, allocations: 147.6 kB / 386.2 MB, free: 8.926 MB / 314.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.002312/0.08428, allocations: 1.156 MB / 387.3 MB, free: 7.766 MB / 314.7 MB
Notification: Performance of FrontEnd - DAE generated: time 5.45e-06/0.08428, allocations: 0 / 387.3 MB, free: 7.766 MB / 314.7 MB
Notification: Performance of FrontEnd: time 1.603e-06/0.08428, allocations: 0 / 387.3 MB, free: 7.766 MB / 314.7 MB
Notification: Performance of Transformations before backend: time 1.922e-05/0.0843, allocations: 0 / 387.3 MB, free: 7.766 MB / 314.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 65
 * Number of variables: 65
Notification: Performance of Generate backend data structure: time 0.001542/0.08584, allocations: 0.7145 MB / 388.1 MB, free: 7.016 MB / 314.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.444e-05/0.08589, allocations: 8.031 kB / 388.1 MB, free: 7.008 MB / 314.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0007729/0.08666, allocations: 191.7 kB / 388.2 MB, free: 6.82 MB / 314.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0006827/0.08734, allocations: 345.4 kB / 388.6 MB, free: 6.461 MB / 314.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 2.828e-05/0.08737, allocations: 21.03 kB / 388.6 MB, free: 6.441 MB / 314.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 5.947e-05/0.08743, allocations: 28.38 kB / 388.6 MB, free: 6.414 MB / 314.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0008059/0.08824, allocations: 447.9 kB / 389.1 MB, free: 5.941 MB / 314.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.821e-05/0.08826, allocations: 7.875 kB / 389.1 MB, free: 5.934 MB / 314.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 4.658e-05/0.0883, allocations: 12 kB / 389.1 MB, free: 5.922 MB / 314.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.173e-05/0.08831, allocations: 8 kB / 389.1 MB, free: 5.914 MB / 314.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0009977/0.08931, allocations: 0.5757 MB / 389.7 MB, free: 5.332 MB / 314.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.002632/0.09194, allocations: 1.602 MB / 391.3 MB, free: 3.664 MB / 314.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0003409/0.09229, allocations: 138.5 kB / 391.4 MB, free: 3.52 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0001737/0.09246, allocations: 83.83 kB / 391.5 MB, free: 3.438 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.002083/0.09454, allocations: 0.9407 MB / 392.4 MB, free: 2.477 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.248e-05/0.09457, allocations: 38.56 kB / 392.5 MB, free: 2.43 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=9): time 1.223e-06/0.09458, allocations: 0 / 392.5 MB, free: 2.43 MB / 314.7 MB
Notification: Performance of matching and sorting (n=9): time 0.0004795/0.09506, allocations: 185.4 kB / 392.7 MB, free: 2.242 MB / 314.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.82e-05/0.09511, allocations: 51.41 kB / 392.7 MB, free: 2.18 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0005396/0.09565, allocations: 401.4 kB / 393.1 MB, free: 1.777 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 3.255e-05/0.09569, allocations: 33.7 kB / 393.1 MB, free: 1.738 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0002545/0.09594, allocations: 275.5 kB / 393.4 MB, free: 1.465 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 3.998e-05/0.09598, allocations: 35.73 kB / 393.4 MB, free: 1.43 MB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001435/0.09612, allocations: 73.61 kB / 393.5 MB, free: 1.352 MB / 314.7 MB
Notification: Performance of setup shared object (initialization): time 0.0002142/0.09634, allocations: 350.9 kB / 393.8 MB, free: 1 MB / 314.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0001468/0.09648, allocations: 75.95 kB / 393.9 MB, free: 0.9258 MB / 314.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0003702/0.09686, allocations: 282 kB / 394.2 MB, free: 0.543 MB / 314.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0005822/0.09744, allocations: 381.6 kB / 394.6 MB, free: 64 kB / 314.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 9.368e-06/0.09745, allocations: 4 kB / 394.6 MB, free: 60 kB / 314.7 MB
Notification: Performance of matching and sorting (n=38) (initialization): time 0.0007955/0.09824, allocations: 409.2 kB / 395 MB, free: 15.65 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.172e-05/0.09826, allocations: 8 kB / 395 MB, free: 15.64 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.444e-05/0.09828, allocations: 8.047 kB / 395 MB, free: 15.63 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 3.293e-05/0.09831, allocations: 11.98 kB / 395 MB, free: 15.62 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0003054/0.09862, allocations: 87.89 kB / 395.1 MB, free: 15.54 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.987e-05/0.09864, allocations: 15.94 kB / 395.1 MB, free: 15.52 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0002861/0.09892, allocations: 44.17 kB / 395.1 MB, free: 15.48 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 6.351e-05/0.09899, allocations: 31.98 kB / 395.2 MB, free: 15.45 MB / 330.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 35
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (38):
 * Single equations (assignments): 38
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0002142/0.0992, allocations: 169.4 kB / 395.3 MB, free: 15.27 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 8.717e-05/0.09929, allocations: 43.75 kB / 395.4 MB, free: 15.23 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0005025/0.09979, allocations: 238.9 kB / 395.6 MB, free: 14.97 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 2.805e-06/0.09979, allocations: 4.031 kB / 395.6 MB, free: 14.97 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 4.629e-06/0.0998, allocations: 0 / 395.6 MB, free: 14.97 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 2.785e-06/0.0998, allocations: 0 / 395.6 MB, free: 14.97 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0006398/0.1004, allocations: 462.1 kB / 396.1 MB, free: 14.48 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 2.265e-06/0.1004, allocations: 0 / 396.1 MB, free: 14.48 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 2.585e-05/0.1005, allocations: 4 kB / 396.1 MB, free: 14.47 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 2.845e-06/0.1005, allocations: 0 / 396.1 MB, free: 14.47 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 6.041e-06/0.1005, allocations: 0 / 396.1 MB, free: 14.47 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 2.054e-06/0.1005, allocations: 0 / 396.1 MB, free: 14.47 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.252e-06/0.1005, allocations: 0 / 396.1 MB, free: 14.47 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0001775/0.1007, allocations: 116.8 kB / 396.2 MB, free: 14.34 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 6.666e-05/0.1007, allocations: 27.8 kB / 396.2 MB, free: 14.31 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 5.05e-05/0.1008, allocations: 7.953 kB / 396.2 MB, free: 14.3 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 8.667e-05/0.1009, allocations: 0 / 396.2 MB, free: 14.3 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 1.491e-05/0.1009, allocations: 0 / 396.2 MB, free: 14.3 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 1.719e-05/0.1009, allocations: 3.938 kB / 396.2 MB, free: 14.3 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0004222/0.1013, allocations: 315.1 kB / 396.5 MB, free: 13.99 MB / 330.7 MB
Notification: Performance of sort global known variables: time 8e-08/0.1013, allocations: 0 / 396.5 MB, free: 13.99 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.0006757/0.102, allocations: 183.3 kB / 396.7 MB, free: 13.81 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 1
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (1):
 * Single equations (assignments): 1
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0006996/0.1027, allocations: 302.5 kB / 397 MB, free: 13.5 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.0003656/0.1031, allocations: 161.4 kB / 397.2 MB, free: 13.35 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 2.535e-06/0.1031, allocations: 0 / 397.2 MB, free: 13.35 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 2.225e-05/0.1031, allocations: 11.94 kB / 397.2 MB, free: 13.34 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0005003/0.1036, allocations: 91.19 kB / 397.3 MB, free: 13.25 MB / 330.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.001007/0.1046, allocations: 0.5203 MB / 397.8 MB, free: 12.7 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0002057/0.1048, allocations: 185.1 kB / 398 MB, free: 12.5 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0002899/0.1051, allocations: 102.7 kB / 398.1 MB, free: 12.41 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 9.807e-05/0.1052, allocations: 40.48 kB / 398.1 MB, free: 12.37 MB / 330.7 MB
Notification: Performance of SimCode: time 7.61e-07/0.1052, allocations: 0 / 398.1 MB, free: 12.37 MB / 330.7 MB
Notification: Performance of Templates: time 0.01316/0.1183, allocations: 6.167 MB / 404.3 MB, free: 6.27 MB / 330.7 MB
"
[Timeout remaining time 660]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG.sim & ./Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.CheckSubstancesData.SimpleReaction2_Get_DfG.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 5.09701120108366]