Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001444/0.001444, allocations: 92.7 kB / 19.44 MB, free: 324 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.00175/0.00175, allocations: 161.3 kB / 22.75 MB, free: 1.656 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.501/1.501, allocations: 177.1 MB / 203.1 MB, free: 5.59 MB / 186.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1432/0.1432, allocations: 17.37 MB / 276.9 MB, free: 11.66 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.403e-06/1.403e-06, allocations: 0 / 352.7 MB, free: 10.31 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.577e-05/2.717e-05, allocations: 6.25 kB / 352.7 MB, free: 10.3 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.3315/0.3315, allocations: 74.57 MB / 427.3 MB, free: 13.72 MB / 330.8 MB
Notification: Performance of NFInst.instExpressions: time 0.4748/0.8063, allocations: 192.1 MB / 0.6048 GB, free: 2.008 MB / 442.8 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01161/0.8179, allocations: 232.1 kB / 0.605 GB, free: 2.008 MB / 442.8 MB
Notification: Performance of NFTyping.typeComponents: time 0.01343/0.8313, allocations: 4.51 MB / 0.6095 GB, free: 2.008 MB / 442.8 MB
Notification: Performance of NFTyping.typeBindings: time 0.05414/0.8854, allocations: 18.52 MB / 0.6275 GB, free: 12.8 MB / 458.8 MB
Notification: Performance of NFTyping.typeClassSections: time 0.08678/0.9722, allocations: 33.51 MB / 0.6603 GB, free: 14.26 MB / 474.8 MB
Notification: Performance of NFFlatten.flatten: time 0.1062/1.078, allocations: 91.37 MB / 0.7495 GB, free: 0.7383 MB / 0.5262 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.5852/1.664, allocations: 54.86 MB / 0.8031 GB, free: 9.66 MB / 0.5419 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.1508/1.815, allocations: 76.62 MB / 0.8779 GB, free: 0 / 0.5419 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.1303/1.945, allocations: 51.55 MB / 0.9282 GB, free: 12.96 MB / 0.5888 GB
Notification: Performance of NFPackage.collectConstants: time 0.043/1.988, allocations: 12.2 MB / 0.9402 GB, free: 0.7578 MB / 0.5888 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1259/2.114, allocations: 34.09 MB / 0.9734 GB, free: 0.9414 MB / 0.62 GB
Notification: Performance of NFScalarize.scalarize: time 0.595/2.709, allocations: 24.26 MB / 0.9971 GB, free: 63.67 MB / 0.6359 GB
Notification: Performance of NFVerifyModel.verify: time 0.09059/2.799, allocations: 31.1 MB / 1.028 GB, free: 63.67 MB / 0.6359 GB
Notification: Performance of NFConvertDAE.convert: time 0.2504/3.05, allocations: 169 MB / 1.193 GB, free: 3.277 MB / 0.6359 GB
Notification: Performance of FrontEnd - DAE generated: time 2.318e-05/3.05, allocations: 0 / 1.193 GB, free: 3.277 MB / 0.6359 GB
Notification: Performance of FrontEnd: time 2.244e-06/3.05, allocations: 2.844 kB / 1.193 GB, free: 3.277 MB / 0.6359 GB
Notification: Performance of Transformations before backend: time 0.004748/3.055, allocations: 0.7188 kB / 1.193 GB, free: 3.277 MB / 0.6359 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.6854/3.74, allocations: 71.18 MB / 1.262 GB, free: 76.64 MB / 0.6828 GB
Notification: Performance of prepare preOptimizeDAE: time 4.342e-05/3.74, allocations: 8.844 kB / 1.262 GB, free: 76.64 MB / 0.6828 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.1221/3.862, allocations: 19.78 MB / 1.281 GB, free: 71.86 MB / 0.6828 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.11/3.972, allocations: 43.55 MB / 1.324 GB, free: 67.34 MB / 0.6828 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.009668/3.982, allocations: 9.239 MB / 1.333 GB, free: 60.5 MB / 0.6828 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03478/4.017, allocations: 4.599 MB / 1.337 GB, free: 60.06 MB / 0.6828 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.3203/4.337, allocations: 112.9 MB / 1.448 GB, free: 4.137 MB / 0.714 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002139/4.339, allocations: 24.59 kB / 1.448 GB, free: 4.129 MB / 0.714 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03362/4.373, allocations: 1.764 MB / 1.449 GB, free: 2.367 MB / 0.714 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001245/4.374, allocations: 1.059 MB / 1.45 GB, free: 1.309 MB / 0.714 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.6426/5.016, allocations: 153 MB / 1.6 GB, free: 276.5 MB / 0.7921 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.215/6.231, allocations: 391 MB / 1.982 GB, free: 218.5 MB / 0.7921 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.133/8.364, allocations: 0.6479 GB / 2.63 GB, free: 81.78 MB / 0.7921 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.1059/8.47, allocations: 60.07 MB / 2.688 GB, free: 21.59 MB / 0.7921 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.9471/9.417, allocations: 256.8 MB / 2.939 GB, free: 145.6 MB / 0.7921 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002467/9.417, allocations: 343.2 kB / 2.939 GB, free: 145.2 MB / 0.7921 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09685/9.514, allocations: 29.18 MB / 2.968 GB, free: 117.9 MB / 0.7921 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001826/9.514, allocations: 7.938 kB / 2.968 GB, free: 117.9 MB / 0.7921 GB
Notification: Performance of matching and sorting (n=3387): time 2.358/11.87, allocations: 424.7 MB / 3.383 GB, free: 63.86 MB / 0.7921 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0004989/11.87, allocations: 447.7 kB / 3.383 GB, free: 63.39 MB / 0.7921 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.06728/11.94, allocations: 30.72 MB / 3.413 GB, free: 33.42 MB / 0.7921 GB
Notification: Performance of collectPreVariables (initialization): time 0.0151/11.96, allocations: 0.572 MB / 3.414 GB, free: 32.84 MB / 0.7921 GB
Notification: Performance of collectInitialEqns (initialization): time 0.3559/12.31, allocations: 21.54 MB / 3.435 GB, free: 237.2 MB / 0.7921 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02601/12.34, allocations: 12.27 MB / 3.447 GB, free: 229.1 MB / 0.7921 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.05796/12.39, allocations: 9.863 MB / 3.456 GB, free: 228.6 MB / 0.7921 GB
Notification: Performance of setup shared object (initialization): time 4.746e-05/12.39, allocations: 301.1 kB / 3.457 GB, free: 228.3 MB / 0.7921 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.07311/12.47, allocations: 39.05 MB / 3.495 GB, free: 218.3 MB / 0.7921 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.08731/12.56, allocations: 53.25 MB / 3.547 GB, free: 185.2 MB / 0.7921 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1915/12.75, allocations: 96.37 MB / 3.641 GB, free: 131.2 MB / 0.7921 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0008514/12.75, allocations: 131.1 kB / 3.641 GB, free: 131.2 MB / 0.7921 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.752/14.5, allocations: 259.2 MB / 3.894 GB, free: 185.6 MB / 0.7921 GB
Notification: Performance of prepare postOptimizeDAE: time 0.001574/14.5, allocations: 194.3 kB / 3.894 GB, free: 185.6 MB / 0.7921 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.001612/14.5, allocations: 445.3 kB / 3.895 GB, free: 185.6 MB / 0.7921 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.555/15.06, allocations: 201.4 MB / 4.091 GB, free: 30.18 MB / 0.7921 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.3888/15.45, allocations: 11.18 MB / 4.102 GB, free: 208.4 MB / 0.7921 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.7297/16.18, allocations: 309.8 MB / 4.405 GB, free: 43.23 MB / 0.7921 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05779/16.23, allocations: 2.479 MB / 4.407 GB, free: 40.75 MB / 0.7921 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01737/16.25, allocations: 2.795 MB / 4.41 GB, free: 37.95 MB / 0.7921 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.05649/16.31, allocations: 18.34 MB / 4.428 GB, free: 19.86 MB / 0.7921 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.3376/16.65, allocations: 4.2 MB / 4.432 GB, free: 202.2 MB / 0.7921 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.867/17.51, allocations: 152.3 MB / 4.581 GB, free: 177.8 MB / 0.7921 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0005661/17.51, allocations: 358.6 kB / 4.581 GB, free: 177.8 MB / 0.7921 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0007603/17.51, allocations: 57.61 kB / 4.581 GB, free: 177.8 MB / 0.7921 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001644/17.52, allocations: 181.7 kB / 4.581 GB, free: 177.8 MB / 0.7921 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.332/18.85, allocations: 223.3 MB / 4.799 GB, free: 169.4 MB / 0.7921 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0004443/18.85, allocations: 11.88 kB / 4.799 GB, free: 169.4 MB / 0.7921 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04569/18.89, allocations: 7.249 MB / 4.806 GB, free: 169.4 MB / 0.7921 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.2735/19.17, allocations: 67.98 MB / 4.873 GB, free: 165.9 MB / 0.7921 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01638/19.18, allocations: 1.441 MB / 4.874 GB, free: 165.3 MB / 0.7921 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3719/19.56, allocations: 155.7 MB / 5.026 GB, free: 88.54 MB / 0.7921 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 8.596e-06/19.56, allocations: 15.94 kB / 5.026 GB, free: 88.53 MB / 0.7921 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.245/20.8, allocations: 201.4 MB / 5.223 GB, free: 157.8 MB / 0.7921 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03893/20.84, allocations: 11.32 MB / 5.234 GB, free: 154.1 MB / 0.7921 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.02117/20.86, allocations: 0.9187 MB / 5.235 GB, free: 153.5 MB / 0.7921 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.04541/20.91, allocations: 1.552 MB / 5.236 GB, free: 153 MB / 0.7921 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02929/20.94, allocations: 4.683 MB / 5.241 GB, free: 152.3 MB / 0.7921 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0133/20.95, allocations: 1.38 MB / 5.242 GB, free: 152.1 MB / 0.7921 GB
Notification: Performance of sorting global known variables: time 0.04522/20.99, allocations: 20.8 MB / 5.263 GB, free: 144.5 MB / 0.7921 GB
Notification: Performance of sort global known variables: time 3.71e-07/20.99, allocations: 4 kB / 5.263 GB, free: 144.5 MB / 0.7921 GB
Notification: Performance of remove unused functions: time 0.1058/21.1, allocations: 20.21 MB / 5.282 GB, free: 142.7 MB / 0.7921 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0389/21.14, allocations: 11.23 MB / 5.293 GB, free: 140.1 MB / 0.7921 GB
Notification: Performance of simCode: created initialization part: time 0.2207/21.36, allocations: 85.3 MB / 5.377 GB, free: 76.3 MB / 0.7921 GB
Notification: Performance of simCode: created event and clocks part: time 1.6e-05/21.36, allocations: 0 / 5.377 GB, free: 76.3 MB / 0.7921 GB
Notification: Performance of simCode: created simulation system equations: time 0.1405/21.5, allocations: 54.53 MB / 5.43 GB, free: 21.7 MB / 0.7921 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.4517/21.95, allocations: 9.161 MB / 5.439 GB, free: 196.9 MB / 0.7921 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.3466/22.3, allocations: 123 MB / 5.559 GB, free: 168 MB / 0.7921 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.09/22.39, allocations: 30.58 MB / 5.589 GB, free: 159.7 MB / 0.7921 GB
Notification: Performance of simCode: alias equations: time 0.07648/22.46, allocations: 15.44 MB / 5.604 GB, free: 158.4 MB / 0.7921 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.03233/22.5, allocations: 4.299 MB / 5.608 GB, free: 158.1 MB / 0.7921 GB
Notification: Performance of SimCode: time 1.533e-06/22.5, allocations: 0 / 5.608 GB, free: 158.1 MB / 0.7921 GB
Notification: Performance of Templates: time 2.813/25.31, allocations: 1.019 GB / 6.627 GB, free: 173.2 MB / 0.7921 GB
"
[Timeout remaining time 635]
make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 68.67185264697764]