Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001881/0.001881, allocations: 87.56 kB / 20.18 MB, free: 4.367 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001945/0.001945, allocations: 168.9 kB / 23.49 MB, free: 1.062 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.489/1.489, allocations: 177.1 MB / 203.8 MB, free: 5.617 MB / 186.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180]
"[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory.
Missing names are:
	Paracetamol_Experiment
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 3.248/3.248, allocations: 274.5 MB / 0.5222 GB, free: 14.29 MB / 458.7 MB
"
[Timeout remaining time 176]
Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen")
translateModel(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen") [Timeout 660]
"Notification: Performance of FrontEnd - Absyn->SCode: time 1.536e-05/1.536e-05, allocations: 2.312 kB / 0.6484 GB, free: 38.85 MB / 0.5262 GB
Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen): time 0.003775/0.003791, allocations: 3.914 MB / 0.6522 GB, free: 36.29 MB / 0.5262 GB
Notification: Performance of NFInst.instExpressions: time 0.00116/0.004951, allocations: 0.808 MB / 0.653 GB, free: 35.76 MB / 0.5262 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0001209/0.005072, allocations: 6.281 kB / 0.653 GB, free: 35.75 MB / 0.5262 GB
Notification: Performance of NFTyping.typeComponents: time 0.0001286/0.0052, allocations: 46.8 kB / 0.653 GB, free: 35.73 MB / 0.5262 GB
Notification: Performance of NFTyping.typeBindings: time 0.0002423/0.005442, allocations: 153 kB / 0.6532 GB, free: 35.65 MB / 0.5262 GB
Notification: Performance of NFTyping.typeClassSections: time 0.0002939/0.005736, allocations: 114.2 kB / 0.6533 GB, free: 35.59 MB / 0.5262 GB
Notification: Performance of NFFlatten.flatten: time 0.0003812/0.006118, allocations: 0.5412 MB / 0.6538 GB, free: 35.3 MB / 0.5262 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001559/0.006274, allocations: 72.12 kB / 0.6539 GB, free: 35.26 MB / 0.5262 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.0002322/0.006506, allocations: 251.4 kB / 0.6541 GB, free: 35.17 MB / 0.5262 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.0002521/0.006758, allocations: 153 kB / 0.6543 GB, free: 35.12 MB / 0.5262 GB
Notification: Performance of NFPackage.collectConstants: time 5.179e-05/0.00681, allocations: 34.94 kB / 0.6543 GB, free: 35.12 MB / 0.5262 GB
Notification: Performance of NFFlatten.collectFunctions: time 6.661e-05/0.006876, allocations: 34.22 kB / 0.6543 GB, free: 35.12 MB / 0.5262 GB
Notification: Performance of combineBinaries: time 0.0003968/0.007273, allocations: 0.6102 MB / 0.6549 GB, free: 34.77 MB / 0.5262 GB
Notification: Performance of replaceArrayConstructors: time 0.0001927/0.007466, allocations: 358 kB / 0.6553 GB, free: 34.56 MB / 0.5262 GB
Notification: Performance of NFVerifyModel.verify: time 6.515e-05/0.007531, allocations: 41.56 kB / 0.6553 GB, free: 34.56 MB / 0.5262 GB
Notification: Performance of FrontEnd: time 2.773e-05/0.007559, allocations: 10.5 kB / 0.6553 GB, free: 34.56 MB / 0.5262 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 67 (64)
 * Number of variables: 67 (67)
Notification: Performance of [SIM] Bindings: time 0.001363/0.008922, allocations: 1.597 MB / 0.6569 GB, free: 33.44 MB / 0.5262 GB
Notification: Performance of [SIM] FunctionAlias: time 0.0001419/0.009064, allocations: 188.4 kB / 0.6571 GB, free: 33.34 MB / 0.5262 GB
Notification: Performance of [SIM] Early Inline: time 0.0005466/0.00961, allocations: 0.8654 MB / 0.6579 GB, free: 32.78 MB / 0.5262 GB
Notification: Performance of [SIM] Simplify 1: time 0.0001687/0.009779, allocations: 158 kB / 0.6581 GB, free: 32.69 MB / 0.5262 GB
Notification: Performance of [SIM] Alias: time 0.001323/0.0111, allocations: 1.159 MB / 0.6592 GB, free: 31.98 MB / 0.5262 GB
Notification: Performance of [SIM] Simplify 2: time 0.000128/0.01123, allocations: 131.6 kB / 0.6593 GB, free: 31.89 MB / 0.5262 GB
Notification: Performance of [SIM] Remove Stream: time 9.219e-05/0.01132, allocations: 125.8 kB / 0.6594 GB, free: 31.79 MB / 0.5262 GB
Notification: Performance of [SIM] Detect States: time 0.0004143/0.01174, allocations: 404.3 kB / 0.6598 GB, free: 31.51 MB / 0.5262 GB
Notification: Performance of [SIM] Events: time 0.0001751/0.01191, allocations: 137.6 kB / 0.66 GB, free: 31.46 MB / 0.5262 GB
Notification: Performance of [SIM] Partitioning: time 0.00041/0.01232, allocations: 435.4 kB / 0.6604 GB, free: 31.19 MB / 0.5262 GB
Notification: Performance of [SIM] Causalize: time 0.001103/0.01342, allocations: 0.9579 MB / 0.6613 GB, free: 30.75 MB / 0.5262 GB
Notification: Performance of [SIM] After Index Reduction Inline: time 0.0004299/0.01385, allocations: 0.67 MB / 0.662 GB, free: 30.36 MB / 0.5262 GB
Notification: Performance of [INI] Simplify: time 0.0006568/0.01451, allocations: 0.5309 MB / 0.6625 GB, free: 30.04 MB / 0.5262 GB
Notification: Performance of [INI] Inline: time 0.0006137/0.01512, allocations: 0.9749 MB / 0.6634 GB, free: 29.45 MB / 0.5262 GB
Notification: Performance of [INI] Partitioning: time 5.05e-05/0.01518, allocations: 32.88 kB / 0.6635 GB, free: 29.43 MB / 0.5262 GB
Notification: Performance of [INI] Cleanup: time 0.0001406/0.01532, allocations: 232.7 kB / 0.6637 GB, free: 29.28 MB / 0.5262 GB
Error: Internal error NBResolveSingularities.balanceInitialization failed because following non-fixable variables could not be solved:
	[DISC] (1) discrete Real peripheral.Cmin (min = -1e-9)
	[DISC] (1) discrete Real peripheral.Cmax (min = -1e-9)
	[DISC] (1) discrete Real periodicDose.absorptionLumen.Cmin (min = -1e-9)
	[DISC] (1) discrete Real periodicDose.absorptionLumen.Cmax (min = -1e-9)
	[DISC] (1) discrete Real central.Cmin (min = -1e-9)
	[DISC] (1) discrete Real central.Cmax (min = -1e-9)

Following equations were created by fixing variables:
		[SCAL] (1) $PRE.central.rising = $START.central.rising; ($RES_SRT_137)
		[SCAL] (1) $PRE.periodicDose.absorptionLumen.rising = $START.periodicDose.absorptionLumen.rising; ($RES_SRT_136)
		[SCAL] (1) $PRE.peripheral.rising = $START.peripheral.rising; ($RES_SRT_135)
		[SCAL] (1) peripheral.AUC = $START.peripheral.AUC; ($RES_SRT_134)
		[SCAL] (1) periodicDose.variableDose.TotalCumulativeMass = $START.periodicDose.variableDose.TotalCumulativeMass; ($RES_SRT_133)
		[SCAL] (1) periodicDose.absorptionLumen.AUC = $START.periodicDose.absorptionLumen.AUC; ($RES_SRT_132)
		[SCAL] (1) periodicDose.TotalCumulativeMass = $START.periodicDose.TotalCumulativeMass; ($RES_SRT_131)
		[SCAL] (1) central.AUC = $START.central.AUC; ($RES_SRT_130)

Use -d=bltdump for more verbose debug output.
Error: Internal error NBInitialization.main failed to apply modules!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 5.728950896998867]