Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002364/0.002364, allocations: 92.84 kB / 20.19 MB, free: 4.359 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002833/0.002833, allocations: 165 kB / 23.49 MB, free: 1.062 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.478/1.478, allocations: 177.1 MB / 203.8 MB, free: 5.617 MB / 186.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180]
"[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory.
Missing names are:
	Paracetamol_Experiment
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 3.258/3.258, allocations: 274.5 MB / 0.5222 GB, free: 14.18 MB / 458.7 MB
"
[Timeout remaining time 176]
Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Pharmacolibrary.Examples.PK_1C_GentamicinEquations2,tolerance=1e-06,outputFormat="empty",numberOfIntervals=499,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2")
translateModel(Pharmacolibrary.Examples.PK_1C_GentamicinEquations2,tolerance=1e-06,outputFormat="empty",numberOfIntervals=499,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2") [Timeout 660]
"Notification: Performance of FrontEnd - Absyn->SCode: time 1.32e-05/1.32e-05, allocations: 2.312 kB / 0.6479 GB, free: 39.17 MB / 0.5262 GB
Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.PK_1C_GentamicinEquations2): time 0.001693/0.001707, allocations: 1.302 MB / 0.6492 GB, free: 38.31 MB / 0.5262 GB
Notification: Performance of NFInst.instExpressions: time 0.0002263/0.001933, allocations: 93.88 kB / 0.6492 GB, free: 38.25 MB / 0.5262 GB
Notification: Performance of NFInst.updateImplicitVariability: time 2.233e-05/0.001955, allocations: 0 / 0.6492 GB, free: 38.25 MB / 0.5262 GB
Notification: Performance of NFTyping.typeComponents: time 1.019e-05/0.001965, allocations: 1.062 kB / 0.6492 GB, free: 38.25 MB / 0.5262 GB
Notification: Performance of NFTyping.typeBindings: time 3.933e-05/0.002005, allocations: 14.52 kB / 0.6493 GB, free: 38.25 MB / 0.5262 GB
Notification: Performance of NFTyping.typeClassSections: time 9.875e-05/0.002103, allocations: 4.719 kB / 0.6493 GB, free: 38.25 MB / 0.5262 GB
Notification: Performance of NFFlatten.flatten: time 3.995e-05/0.002143, allocations: 20.38 kB / 0.6493 GB, free: 38.24 MB / 0.5262 GB
Notification: Performance of NFFlatten.resolveConnections: time 3.671e-05/0.00218, allocations: 2.188 kB / 0.6493 GB, free: 38.24 MB / 0.5262 GB
Notification: Performance of NFEvalConstants.evaluate: time 2.682e-05/0.002207, allocations: 5.594 kB / 0.6493 GB, free: 38.24 MB / 0.5262 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.000109/0.002316, allocations: 13.75 kB / 0.6493 GB, free: 38.24 MB / 0.5262 GB
Notification: Performance of NFPackage.collectConstants: time 1.218e-05/0.002328, allocations: 3.438 kB / 0.6493 GB, free: 38.24 MB / 0.5262 GB
Notification: Performance of NFFlatten.collectFunctions: time 7.915e-06/0.002336, allocations: 1.094 kB / 0.6493 GB, free: 38.24 MB / 0.5262 GB
Notification: Performance of combineBinaries: time 4.131e-05/0.002377, allocations: 17.08 kB / 0.6493 GB, free: 38.23 MB / 0.5262 GB
Notification: Performance of replaceArrayConstructors: time 7.825e-06/0.002385, allocations: 13.12 kB / 0.6493 GB, free: 38.22 MB / 0.5262 GB
Notification: Performance of NFVerifyModel.verify: time 8.677e-06/0.002394, allocations: 2.75 kB / 0.6493 GB, free: 38.22 MB / 0.5262 GB
Notification: Performance of FrontEnd: time 6.232e-06/0.0024, allocations: 3.188 kB / 0.6493 GB, free: 38.22 MB / 0.5262 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 2 (2)
 * Number of variables: 2 (2)
Notification: Performance of [SIM] Bindings: time 0.0002683/0.002668, allocations: 211.2 kB / 0.6495 GB, free: 37.95 MB / 0.5262 GB
Notification: Performance of [SIM] FunctionAlias: time 3.362e-05/0.002702, allocations: 12.06 kB / 0.6496 GB, free: 37.94 MB / 0.5262 GB
Notification: Performance of [SIM] Early Inline: time 4.255e-05/0.002745, allocations: 64.77 kB / 0.6496 GB, free: 37.88 MB / 0.5262 GB
Notification: Performance of [SIM] Simplify 1: time 3.279e-05/0.002777, allocations: 43.56 kB / 0.6497 GB, free: 37.81 MB / 0.5262 GB
Notification: Performance of [SIM] Alias: time 5.219e-05/0.00283, allocations: 80.61 kB / 0.6497 GB, free: 37.7 MB / 0.5262 GB
Notification: Performance of [SIM] Simplify 2: time 2.009e-05/0.00285, allocations: 45.81 kB / 0.6498 GB, free: 37.64 MB / 0.5262 GB
Notification: Performance of [SIM] Remove Stream: time 1.435e-05/0.002864, allocations: 34.12 kB / 0.6498 GB, free: 37.59 MB / 0.5262 GB
Notification: Performance of [SIM] Detect States: time 0.000119/0.002983, allocations: 87.64 kB / 0.6499 GB, free: 37.46 MB / 0.5262 GB
Notification: Performance of [SIM] Events: time 1.559e-05/0.002999, allocations: 7.938 kB / 0.6499 GB, free: 37.46 MB / 0.5262 GB
Notification: Performance of [SIM] Partitioning: time 7.627e-05/0.003075, allocations: 80.16 kB / 0.65 GB, free: 37.36 MB / 0.5262 GB
Notification: Performance of [SIM] Causalize: time 0.0001655/0.00324, allocations: 50.03 kB / 0.65 GB, free: 37.32 MB / 0.5262 GB
Notification: Performance of [SIM] After Index Reduction Inline: time 1.663e-05/0.003257, allocations: 20.8 kB / 0.65 GB, free: 37.32 MB / 0.5262 GB
Notification: Performance of [INI] Simplify: time 5.9e-05/0.003316, allocations: 77.77 kB / 0.6501 GB, free: 37.21 MB / 0.5262 GB
Notification: Performance of [INI] Inline: time 2.359e-05/0.00334, allocations: 43.11 kB / 0.6502 GB, free: 37.18 MB / 0.5262 GB
Notification: Performance of [INI] Partitioning: time 5.27e-06/0.003345, allocations: 10.91 kB / 0.6502 GB, free: 37.17 MB / 0.5262 GB
Notification: Performance of [INI] Cleanup: time 1.274e-05/0.003358, allocations: 9.266 kB / 0.6502 GB, free: 37.16 MB / 0.5262 GB
Notification: Performance of [INI] Causalize: time 0.0001366/0.003494, allocations: 88.58 kB / 0.6503 GB, free: 37.12 MB / 0.5262 GB
Notification: Performance of [INI] Tearing: time 1.361e-05/0.003508, allocations: 5.281 kB / 0.6503 GB, free: 37.12 MB / 0.5262 GB
Notification: Performance of [SIM] Initialization: time 1.062e-06/0.003509, allocations: 1.906 kB / 0.6503 GB, free: 37.12 MB / 0.5262 GB
Notification: Performance of [SIM] Remove Dummies: time 3.146e-06/0.003512, allocations: 0 / 0.6503 GB, free: 37.12 MB / 0.5262 GB
Notification: Performance of [SIM] Tearing: time 8.41e-07/0.003513, allocations: 1.188 kB / 0.6503 GB, free: 37.12 MB / 0.5262 GB
Notification: Performance of [SIM] Categorize: time 4.448e-06/0.003517, allocations: 5.562 kB / 0.6503 GB, free: 37.12 MB / 0.5262 GB
Notification: Performance of [SIM] Solve: time 4.795e-05/0.003565, allocations: 18.02 kB / 0.6503 GB, free: 37.11 MB / 0.5262 GB
Notification: Performance of [SIM] Jacobian: time 5.141e-05/0.003617, allocations: 64.7 kB / 0.6504 GB, free: 37.03 MB / 0.5262 GB
Notification: Performance of [SIM] Minimize Homotopy System: time 3.21e-07/0.003617, allocations: 0 / 0.6504 GB, free: 37.03 MB / 0.5262 GB
Notification: Partition statistics after passing the back-end:
 * Number of ODE partitions: ..................... 1
 * Number of algebraic partitions: ............... 1
 * Number of ODE event partitions: ............... 0
 * Number of algebraic event partitions: ......... 0
 * Number of clocked partitions: ................. 0
 * Number of initial partitions: ................. 1
 * Number of initial(lambda=0) partitions: ....... 0
Notification: Variable statistics after passing the back-end:
 * Number of states: ............................. 1 (1) {C}
 * Number of discrete states: .................... 0 (0) {}
 * Number of clocked states: ..................... 0 (0) {}
 * Number of discrete variables: ................. 0 (0) {}
 * Number of clocks: ............................. 0 (0) {}
 * Number of top-level inputs: ................... 0 (0) {}
Notification: [Simulation] Strong Component statistics after passing the back-end:
 * Number of single strong components: ........... 2 (scalar:2, array:0, record:0)
 * Number of multi strong components: ............ 0 (algorithm:0, when:0, if:0, tuple:0)
 * Number of for-loop strong components: ......... 0 (resizable: 0, generic: 0, entwined:0)
 * Number of algebraic-loop strong components: ... 0 (linear: 0, nonlinear:0)
Notification: [Initialization] Strong Component statistics after passing the back-end:
 * Number of single strong components: ........... 3 (scalar:3, array:0, record:0)
 * Number of multi strong components: ............ 0 (algorithm:0, when:0, if:0, tuple:0)
 * Number of for-loop strong components: ......... 0 (resizable: 0, generic: 0, entwined:0)
 * Number of algebraic-loop strong components: ... 0 (linear: 0, nonlinear:0)
Notification: Performance of backend: time 2.598e-05/0.003643, allocations: 16.8 kB / 0.6504 GB, free: 37.03 MB / 0.5262 GB
Notification: Performance of SimCode: time 0.0002288/0.003872, allocations: 161.7 kB / 0.6505 GB, free: 36.9 MB / 0.5262 GB
Notification: Performance of Templates: time 0.002425/0.006297, allocations: 338.8 kB / 0.6509 GB, free: 36.85 MB / 0.5262 GB
"
[Timeout remaining time 660]
make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2.makefile [Timeout 660]
(rm -f Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Examples.PK_1C_GentamicinEquations2.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 7.764497026102617]