Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001802/0.001802, allocations: 88.84 kB / 20.18 MB, free: 4.355 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.00189/0.00189, allocations: 161 kB / 23.49 MB, free: 1.055 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.478/1.478, allocations: 177.1 MB / 203.8 MB, free: 5.629 MB / 186.7 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 3.32/3.32, allocations: 274.5 MB / 0.5222 GB, free: 14.23 MB / 458.7 MB " [Timeout remaining time 176] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=28800,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites") translateModel(Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=28800,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites") [Timeout 660] "Notification: Performance of FrontEnd - Absyn->SCode: time 1.905e-05/1.905e-05, allocations: 6.031 kB / 0.648 GB, free: 39 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites): time 0.003525/0.003544, allocations: 3.764 MB / 0.6517 GB, free: 36.55 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.001181/0.004725, allocations: 0.8716 MB / 0.6526 GB, free: 35.97 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001512/0.004877, allocations: 9.688 kB / 0.6526 GB, free: 35.96 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0001578/0.005034, allocations: 64.48 kB / 0.6526 GB, free: 35.93 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0002959/0.00533, allocations: 182.7 kB / 0.6528 GB, free: 35.83 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.000232/0.005562, allocations: 136.4 kB / 0.6529 GB, free: 35.75 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.0004905/0.006053, allocations: 0.7195 MB / 0.6536 GB, free: 35.38 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0001967/0.00625, allocations: 93.92 kB / 0.6537 GB, free: 35.33 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0002797/0.006529, allocations: 340.9 kB / 0.6541 GB, free: 35.2 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0002494/0.006779, allocations: 191 kB / 0.6542 GB, free: 35.14 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 6.86e-05/0.006847, allocations: 47.69 kB / 0.6543 GB, free: 35.14 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 8.9e-05/0.006936, allocations: 44.72 kB / 0.6543 GB, free: 35.14 MB / 0.5262 GB Notification: Performance of combineBinaries: time 0.0005579/0.007494, allocations: 0.7952 MB / 0.6551 GB, free: 34.69 MB / 0.5262 GB Notification: Performance of replaceArrayConstructors: time 0.000212/0.007706, allocations: 435.8 kB / 0.6555 GB, free: 34.44 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0001289/0.007835, allocations: 61.75 kB / 0.6556 GB, free: 34.44 MB / 0.5262 GB Notification: Performance of FrontEnd: time 4.393e-05/0.007879, allocations: 10.31 kB / 0.6556 GB, free: 34.44 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 105 (100) * Number of variables: 105 (105) Notification: Performance of [SIM] Bindings: time 0.001797/0.009676, allocations: 2.042 MB / 0.6576 GB, free: 33.05 MB / 0.5262 GB Notification: Performance of [SIM] FunctionAlias: time 0.0001805/0.009857, allocations: 278.9 kB / 0.6578 GB, free: 32.91 MB / 0.5262 GB Notification: Performance of [SIM] Early Inline: time 0.0007649/0.01062, allocations: 1.227 MB / 0.659 GB, free: 32.14 MB / 0.5262 GB Notification: Performance of [SIM] Simplify 1: time 0.0002321/0.01085, allocations: 210.2 kB / 0.6592 GB, free: 32.04 MB / 0.5262 GB Notification: Performance of [SIM] Alias: time 0.001925/0.01278, allocations: 1.678 MB / 0.6609 GB, free: 31.05 MB / 0.5262 GB Notification: Performance of [SIM] Simplify 2: time 0.0001847/0.01296, allocations: 181.5 kB / 0.6611 GB, free: 30.95 MB / 0.5262 GB Notification: Performance of [SIM] Remove Stream: time 0.0001233/0.01309, allocations: 153.1 kB / 0.6612 GB, free: 30.84 MB / 0.5262 GB Notification: Performance of [SIM] Detect States: time 0.0005638/0.01365, allocations: 0.581 MB / 0.6618 GB, free: 30.45 MB / 0.5262 GB Notification: Performance of [SIM] Events: time 0.000222/0.01387, allocations: 209.4 kB / 0.662 GB, free: 30.36 MB / 0.5262 GB Notification: Performance of [SIM] Partitioning: time 0.0005865/0.01446, allocations: 0.5943 MB / 0.6626 GB, free: 30.02 MB / 0.5262 GB Notification: Performance of [SIM] Causalize: time 0.001541/0.016, allocations: 1.369 MB / 0.6639 GB, free: 29.43 MB / 0.5262 GB Notification: Performance of [SIM] After Index Reduction Inline: time 0.0006019/0.0166, allocations: 0.9772 MB / 0.6648 GB, free: 28.85 MB / 0.5262 GB Notification: Performance of [INI] Simplify: time 0.0008743/0.01748, allocations: 0.638 MB / 0.6655 GB, free: 28.51 MB / 0.5262 GB Notification: Performance of [INI] Inline: time 0.0008988/0.01838, allocations: 1.421 MB / 0.6669 GB, free: 27.66 MB / 0.5262 GB Notification: Performance of [INI] Partitioning: time 6.77e-05/0.01844, allocations: 42.62 kB / 0.6669 GB, free: 27.64 MB / 0.5262 GB Notification: Performance of [INI] Cleanup: time 0.0001968/0.01864, allocations: 323.5 kB / 0.6672 GB, free: 27.43 MB / 0.5262 GB Error: Internal error NBResolveSingularities.balanceInitialization failed because following non-fixable variables could not be solved: [DISC] (1) discrete Real gluthatione_conjugation.Cmin (min = -1e-9) [DISC] (1) discrete Real gluthatione_conjugation.Cmax (min = -1e-9) [DISC] (1) discrete Real NAPQI.Cmin (min = -1e-9) [DISC] (1) discrete Real NAPQI.Cmax (min = -1e-9) [DISC] (1) discrete Real sulfate_conjugates.Cmin (min = -1e-9) [DISC] (1) discrete Real sulfate_conjugates.Cmax (min = -1e-9) [DISC] (1) discrete Real gluconic_acid.Cmin (min = -1e-9) [DISC] (1) discrete Real gluconic_acid.Cmax (min = -1e-9) [DISC] (1) discrete Real acetaminophen.Cmin (min = -1e-9) [DISC] (1) discrete Real acetaminophen.Cmax (min = -1e-9) Following equations were created by fixing variables: [SCAL] (1) $PRE.acetaminophen.rising = $START.acetaminophen.rising; ($RES_SRT_196) [SCAL] (1) $PRE.gluconic_acid.rising = $START.gluconic_acid.rising; ($RES_SRT_195) [SCAL] (1) $PRE.sulfate_conjugates.rising = $START.sulfate_conjugates.rising; ($RES_SRT_194) [SCAL] (1) $PRE.NAPQI.rising = $START.NAPQI.rising; ($RES_SRT_193) [SCAL] (1) $PRE.gluthatione_conjugation.rising = $START.gluthatione_conjugation.rising; ($RES_SRT_192) [SCAL] (1) gluthatione_conjugation.AUC = $START.gluthatione_conjugation.AUC; ($RES_SRT_191) [SCAL] (1) NAPQI.AUC = $START.NAPQI.AUC; ($RES_SRT_190) [SCAL] (1) sulfate_conjugates.AUC = $START.sulfate_conjugates.AUC; ($RES_SRT_189) [SCAL] (1) gluconic_acid.AUC = $START.gluconic_acid.AUC; ($RES_SRT_188) [SCAL] (1) acetaminophen.AUC = $START.acetaminophen.AUC; ($RES_SRT_187) [SCAL] (1) periodicDose.variableDose.TotalCumulativeMass = $START.periodicDose.variableDose.TotalCumulativeMass; ($RES_SRT_186) [SCAL] (1) periodicDose.TotalCumulativeMass = $START.periodicDose.TotalCumulativeMass; ($RES_SRT_185) Use -d=bltdump for more verbose debug output. Error: Internal error NBInitialization.main failed to apply modules! " [Timeout remaining time 660] [Calling sys.exit(0), Time elapsed: 5.751817913958803]