Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002291/0.002291, allocations: 88.84 kB / 20.18 MB, free: 4.367 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002525/0.002525, allocations: 168.9 kB / 23.49 MB, free: 1.062 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.482/1.482, allocations: 177.1 MB / 203.8 MB, free: 5.629 MB / 186.7 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 3.248/3.248, allocations: 274.5 MB / 0.5222 GB, free: 14.21 MB / 458.7 MB " [Timeout remaining time 176] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=864000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites") translateModel(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=864000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites") [Timeout 660] "Notification: Performance of FrontEnd - Absyn->SCode: time 1.462e-05/1.462e-05, allocations: 2.312 kB / 0.6481 GB, free: 39 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites): time 0.004658/0.004673, allocations: 5.721 MB / 0.6537 GB, free: 35.29 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.00164/0.006313, allocations: 1.313 MB / 0.655 GB, free: 34.38 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0002293/0.006542, allocations: 8.188 kB / 0.655 GB, free: 34.38 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0002278/0.00677, allocations: 126.4 kB / 0.6551 GB, free: 34.31 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0004866/0.007256, allocations: 368.4 kB / 0.6554 GB, free: 34.04 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.000361/0.007617, allocations: 262.4 kB / 0.6557 GB, free: 33.87 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.0009779/0.008595, allocations: 1.433 MB / 0.6571 GB, free: 33.11 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0003439/0.008939, allocations: 182.7 kB / 0.6573 GB, free: 33 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0006405/0.00958, allocations: 0.6624 MB / 0.6579 GB, free: 32.71 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0005004/0.01008, allocations: 384.8 kB / 0.6583 GB, free: 32.59 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0001276/0.01021, allocations: 107.3 kB / 0.6584 GB, free: 32.59 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001809/0.01039, allocations: 110.6 kB / 0.6585 GB, free: 32.59 MB / 0.5262 GB Notification: Performance of combineBinaries: time 0.0009281/0.01132, allocations: 1.547 MB / 0.66 GB, free: 31.66 MB / 0.5262 GB Notification: Performance of replaceArrayConstructors: time 0.0003678/0.01168, allocations: 0.8549 MB / 0.6608 GB, free: 31.15 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0001466/0.01183, allocations: 102.2 kB / 0.6609 GB, free: 31.15 MB / 0.5262 GB Notification: Performance of FrontEnd: time 6.091e-05/0.01189, allocations: 26.81 kB / 0.6609 GB, free: 31.14 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 165 (159) * Number of variables: 165 (165) Notification: Performance of [SIM] Bindings: time 0.002563/0.01446, allocations: 3.865 MB / 0.6647 GB, free: 28.53 MB / 0.5262 GB Notification: Performance of [SIM] FunctionAlias: time 0.0003402/0.0148, allocations: 0.4948 MB / 0.6652 GB, free: 28.25 MB / 0.5262 GB Notification: Performance of [SIM] Early Inline: time 0.00149/0.01629, allocations: 2.348 MB / 0.6675 GB, free: 26.68 MB / 0.5262 GB Notification: Performance of [SIM] Simplify 1: time 0.0003917/0.01668, allocations: 343.6 kB / 0.6678 GB, free: 26.52 MB / 0.5262 GB Notification: Performance of [SIM] Alias: time 0.003095/0.01977, allocations: 3.014 MB / 0.6708 GB, free: 24.76 MB / 0.5262 GB Notification: Performance of [SIM] Simplify 2: time 0.000413/0.02019, allocations: 287.5 kB / 0.671 GB, free: 24.63 MB / 0.5262 GB Notification: Performance of [SIM] Remove Stream: time 0.0002096/0.02039, allocations: 273.5 kB / 0.6713 GB, free: 24.44 MB / 0.5262 GB Notification: Performance of [SIM] Detect States: time 0.0008919/0.02129, allocations: 0.9427 MB / 0.6722 GB, free: 23.79 MB / 0.5262 GB Notification: Performance of [SIM] Events: time 0.000396/0.02168, allocations: 391.9 kB / 0.6726 GB, free: 23.62 MB / 0.5262 GB Notification: Performance of [SIM] Partitioning: time 0.001003/0.02269, allocations: 0.9665 MB / 0.6735 GB, free: 23.05 MB / 0.5262 GB Notification: Performance of [SIM] Causalize: time 0.00257/0.02526, allocations: 2.055 MB / 0.6755 GB, free: 22.18 MB / 0.5262 GB Notification: Performance of [SIM] After Index Reduction Inline: time 0.001319/0.02658, allocations: 1.775 MB / 0.6773 GB, free: 21.06 MB / 0.5262 GB Notification: Performance of [INI] Simplify: time 0.001587/0.02816, allocations: 1.243 MB / 0.6785 GB, free: 20.38 MB / 0.5262 GB Notification: Performance of [INI] Inline: time 0.001923/0.03009, allocations: 2.621 MB / 0.6811 GB, free: 18.7 MB / 0.5262 GB Notification: Performance of [INI] Partitioning: time 0.0001164/0.0302, allocations: 70.58 kB / 0.6811 GB, free: 18.65 MB / 0.5262 GB Notification: Performance of [INI] Cleanup: time 0.0004338/0.03064, allocations: 0.6049 MB / 0.6817 GB, free: 18.23 MB / 0.5262 GB Error: Internal error NBResolveSingularities.balanceInitialization failed because following non-fixable variables could not be solved: [DISC] (1) discrete Real GS_441524.peripheral.Cmin (min = -1e-9) [DISC] (1) discrete Real GS_441524.peripheral.Cmax (min = -1e-9) [DISC] (1) discrete Real GS_441524.central.Cmin (min = -1e-9) [DISC] (1) discrete Real GS_441524.central.Cmax (min = -1e-9) [DISC] (1) discrete Real GS_704277.peripheral.Cmin (min = -1e-9) [DISC] (1) discrete Real GS_704277.peripheral.Cmax (min = -1e-9) [DISC] (1) discrete Real GS_704277.central.Cmin (min = -1e-9) [DISC] (1) discrete Real GS_704277.central.Cmax (min = -1e-9) [DISC] (1) discrete Real remdesivir.peripheral.Cmin (min = -1e-9) [DISC] (1) discrete Real remdesivir.peripheral.Cmax (min = -1e-9) [DISC] (1) discrete Real remdesivir.central.Cmin (min = -1e-9) [DISC] (1) discrete Real remdesivir.central.Cmax (min = -1e-9) Following equations were created by fixing variables: [SCAL] (1) $PRE.remdesivir.central.rising = $START.remdesivir.central.rising; ($RES_SRT_348) [SCAL] (1) $PRE.remdesivir.peripheral.rising = $START.remdesivir.peripheral.rising; ($RES_SRT_347) [SCAL] (1) $PRE.GS_704277.central.rising = $START.GS_704277.central.rising; ($RES_SRT_346) [SCAL] (1) $PRE.GS_704277.peripheral.rising = $START.GS_704277.peripheral.rising; ($RES_SRT_345) [SCAL] (1) $PRE.GS_441524.central.rising = $START.GS_441524.central.rising; ($RES_SRT_344) [SCAL] (1) $PRE.GS_441524.peripheral.rising = $START.GS_441524.peripheral.rising; ($RES_SRT_343) [SCAL] (1) GS_441524.peripheral.AUC = $START.GS_441524.peripheral.AUC; ($RES_SRT_342) [SCAL] (1) GS_441524.periodicDose.variableDose.TotalCumulativeMass = $START.GS_441524.periodicDose.variableDose.TotalCumulativeMass; ($RES_SRT_341) [SCAL] (1) GS_441524.periodicDose.TotalCumulativeMass = $START.GS_441524.periodicDose.TotalCumulativeMass; ($RES_SRT_340) [SCAL] (1) GS_441524.central.AUC = $START.GS_441524.central.AUC; ($RES_SRT_339) [SCAL] (1) GS_704277.peripheral.AUC = $START.GS_704277.peripheral.AUC; ($RES_SRT_338) [SCAL] (1) GS_704277.periodicDose.variableDose.TotalCumulativeMass = $START.GS_704277.periodicDose.variableDose.TotalCumulativeMass; ($RES_SRT_337) [SCAL] (1) GS_704277.periodicDose.TotalCumulativeMass = $START.GS_704277.periodicDose.TotalCumulativeMass; ($RES_SRT_336) [SCAL] (1) GS_704277.central.AUC = $START.GS_704277.central.AUC; ($RES_SRT_335) [SCAL] (1) remdesivir.peripheral.AUC = $START.remdesivir.peripheral.AUC; ($RES_SRT_334) [SCAL] (1) remdesivir.periodicDose.variableDose.TotalCumulativeMass = $START.remdesivir.periodicDose.variableDose.TotalCumulativeMass; ($RES_SRT_333) [SCAL] (1) remdesivir.periodicDose.TotalCumulativeMass = $START.remdesivir.periodicDose.TotalCumulativeMass; ($RES_SRT_332) [SCAL] (1) remdesivir.central.AUC = $START.remdesivir.central.AUC; ($RES_SRT_331) Use -d=bltdump for more verbose debug output. Error: Internal error NBInitialization.main failed to apply modules! " [Timeout remaining time 660] [Calling sys.exit(0), Time elapsed: 5.726000245194882]