Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002544/0.002544, allocations: 88.84 kB / 20.18 MB, free: 4.363 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002893/0.002893, allocations: 169.4 kB / 23.49 MB, free: 1.059 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.506/1.506, allocations: 177.1 MB / 203.8 MB, free: 5.617 MB / 186.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180]
"[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory.
Missing names are:
	Paracetamol_Experiment
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 3.311/3.311, allocations: 274.5 MB / 0.5222 GB, free: 14.15 MB / 458.7 MB
"
[Timeout remaining time 176]
Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1")
translateModel(Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1") [Timeout 660]
"Notification: Performance of FrontEnd - Absyn->SCode: time 1.584e-05/1.584e-05, allocations: 2.312 kB / 0.6479 GB, free: 38.97 MB / 0.5262 GB
Notification: Performance of NFInst.instantiate(Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1): time 0.001246/0.001262, allocations: 0.5326 MB / 0.6484 GB, free: 38.68 MB / 0.5262 GB
Notification: Performance of NFInst.instExpressions: time 0.0001374/0.0014, allocations: 20.45 kB / 0.6484 GB, free: 38.67 MB / 0.5262 GB
Notification: Performance of NFInst.updateImplicitVariability: time 3.049e-05/0.00143, allocations: 2.25 kB / 0.6484 GB, free: 38.67 MB / 0.5262 GB
Notification: Performance of NFTyping.typeComponents: time 1.141e-05/0.001442, allocations: 1.344 kB / 0.6484 GB, free: 38.67 MB / 0.5262 GB
Notification: Performance of NFTyping.typeBindings: time 3.568e-05/0.001477, allocations: 5.141 kB / 0.6484 GB, free: 38.67 MB / 0.5262 GB
Notification: Performance of NFTyping.typeClassSections: time 9.42e-05/0.001571, allocations: 9.25 kB / 0.6484 GB, free: 38.66 MB / 0.5262 GB
Notification: Performance of NFFlatten.flatten: time 5.153e-05/0.001623, allocations: 20.98 kB / 0.6485 GB, free: 38.66 MB / 0.5262 GB
Notification: Performance of NFFlatten.resolveConnections: time 3.957e-05/0.001662, allocations: 2.375 kB / 0.6485 GB, free: 38.66 MB / 0.5262 GB
Notification: Performance of NFEvalConstants.evaluate: time 4.325e-05/0.001706, allocations: 12.25 kB / 0.6485 GB, free: 38.66 MB / 0.5262 GB
Notification: Performance of NFSimplifyModel.simplify: time 4.848e-05/0.001754, allocations: 9.172 kB / 0.6485 GB, free: 38.66 MB / 0.5262 GB
Notification: Performance of NFPackage.collectConstants: time 1.506e-05/0.001769, allocations: 1.906 kB / 0.6485 GB, free: 38.66 MB / 0.5262 GB
Notification: Performance of NFFlatten.collectFunctions: time 7.264e-06/0.001777, allocations: 0 / 0.6485 GB, free: 38.66 MB / 0.5262 GB
Notification: Performance of combineBinaries: time 4.594e-05/0.001822, allocations: 39 kB / 0.6485 GB, free: 38.64 MB / 0.5262 GB
Notification: Performance of replaceArrayConstructors: time 9.808e-06/0.001832, allocations: 20.78 kB / 0.6485 GB, free: 38.62 MB / 0.5262 GB
Notification: Performance of NFVerifyModel.verify: time 8.886e-06/0.001841, allocations: 2.156 kB / 0.6485 GB, free: 38.62 MB / 0.5262 GB
Notification: Performance of FrontEnd: time 6.803e-06/0.001848, allocations: 1.5 kB / 0.6485 GB, free: 38.62 MB / 0.5262 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 3 (3)
 * Number of variables: 3 (3)
Notification: Performance of [SIM] Bindings: time 0.0002882/0.002136, allocations: 253.5 kB / 0.6488 GB, free: 38.33 MB / 0.5262 GB
Notification: Performance of [SIM] FunctionAlias: time 3.989e-05/0.002176, allocations: 18.95 kB / 0.6488 GB, free: 38.32 MB / 0.5262 GB
Notification: Performance of [SIM] Early Inline: time 5.867e-05/0.002235, allocations: 100.8 kB / 0.6489 GB, free: 38.24 MB / 0.5262 GB
Notification: Performance of [SIM] Simplify 1: time 4.489e-05/0.00228, allocations: 45.14 kB / 0.6489 GB, free: 38.18 MB / 0.5262 GB
Notification: Performance of [SIM] Alias: time 5.363e-05/0.002333, allocations: 98.73 kB / 0.649 GB, free: 38.06 MB / 0.5262 GB
Notification: Performance of [SIM] Simplify 2: time 2.357e-05/0.002357, allocations: 46.42 kB / 0.6491 GB, free: 38.01 MB / 0.5262 GB
Notification: Performance of [SIM] Remove Stream: time 1.643e-05/0.002373, allocations: 41.47 kB / 0.6491 GB, free: 37.95 MB / 0.5262 GB
Notification: Performance of [SIM] Detect States: time 0.0001358/0.002509, allocations: 101.9 kB / 0.6492 GB, free: 37.83 MB / 0.5262 GB
Notification: Performance of [SIM] Events: time 2.177e-05/0.002531, allocations: 13.44 kB / 0.6492 GB, free: 37.82 MB / 0.5262 GB
Notification: Performance of [SIM] Partitioning: time 9.896e-05/0.00263, allocations: 88.7 kB / 0.6493 GB, free: 37.73 MB / 0.5262 GB
Notification: Performance of [SIM] Causalize: time 0.0001697/0.0028, allocations: 38.41 kB / 0.6493 GB, free: 37.71 MB / 0.5262 GB
Notification: Performance of [SIM] After Index Reduction Inline: time 3.395e-05/0.002833, allocations: 52.5 kB / 0.6494 GB, free: 37.69 MB / 0.5262 GB
Notification: Performance of [INI] Simplify: time 7.264e-05/0.002906, allocations: 99.83 kB / 0.6495 GB, free: 37.57 MB / 0.5262 GB
Notification: Performance of [INI] Inline: time 4.442e-05/0.002951, allocations: 83.7 kB / 0.6496 GB, free: 37.54 MB / 0.5262 GB
Notification: Performance of [INI] Partitioning: time 5.871e-06/0.002956, allocations: 9.688 kB / 0.6496 GB, free: 37.52 MB / 0.5262 GB
Notification: Performance of [INI] Cleanup: time 1.694e-05/0.002973, allocations: 20.34 kB / 0.6496 GB, free: 37.51 MB / 0.5262 GB
Notification: Performance of [INI] Causalize: time 0.0002329/0.003206, allocations: 156.8 kB / 0.6497 GB, free: 37.45 MB / 0.5262 GB
Notification: Performance of [INI] Tearing: time 1.55e-05/0.003222, allocations: 8.344 kB / 0.6498 GB, free: 37.45 MB / 0.5262 GB
Notification: Performance of [SIM] Initialization: time 5.11e-07/0.003222, allocations: 0 / 0.6498 GB, free: 37.45 MB / 0.5262 GB
Notification: Performance of [SIM] Remove Dummies: time 3.437e-06/0.003226, allocations: 1.188 kB / 0.6498 GB, free: 37.45 MB / 0.5262 GB
Notification: Performance of [SIM] Tearing: time 8.42e-07/0.003227, allocations: 0 / 0.6498 GB, free: 37.45 MB / 0.5262 GB
Notification: Performance of [SIM] Categorize: time 6.132e-06/0.003233, allocations: 4.312 kB / 0.6498 GB, free: 37.45 MB / 0.5262 GB
Notification: Performance of [SIM] Solve: time 7.675e-05/0.003309, allocations: 37.48 kB / 0.6498 GB, free: 37.44 MB / 0.5262 GB
Notification: Performance of [SIM] Jacobian: time 9.013e-05/0.0034, allocations: 95.61 kB / 0.6499 GB, free: 37.34 MB / 0.5262 GB
Notification: Performance of [SIM] Minimize Homotopy System: time 3.81e-07/0.0034, allocations: 0.875 kB / 0.6499 GB, free: 37.34 MB / 0.5262 GB
Notification: Partition statistics after passing the back-end:
 * Number of ODE partitions: ..................... 1
 * Number of algebraic partitions: ............... 0
 * Number of ODE event partitions: ............... 0
 * Number of algebraic event partitions: ......... 0
 * Number of clocked partitions: ................. 0
 * Number of initial partitions: ................. 1
 * Number of initial(lambda=0) partitions: ....... 0
Notification: Variable statistics after passing the back-end:
 * Number of states: ............................. 3 (3) {T, I, V}
 * Number of discrete states: .................... 0 (0) {}
 * Number of clocked states: ..................... 0 (0) {}
 * Number of discrete variables: ................. 0 (0) {}
 * Number of clocks: ............................. 0 (0) {}
 * Number of top-level inputs: ................... 0 (0) {}
Notification: [Simulation] Strong Component statistics after passing the back-end:
 * Number of single strong components: ........... 3 (scalar:3, array:0, record:0)
 * Number of multi strong components: ............ 0 (algorithm:0, when:0, if:0, tuple:0)
 * Number of for-loop strong components: ......... 0 (resizable: 0, generic: 0, entwined:0)
 * Number of algebraic-loop strong components: ... 0 (linear: 0, nonlinear:0)
Notification: [Initialization] Strong Component statistics after passing the back-end:
 * Number of single strong components: ........... 6 (scalar:6, array:0, record:0)
 * Number of multi strong components: ............ 0 (algorithm:0, when:0, if:0, tuple:0)
 * Number of for-loop strong components: ......... 0 (resizable: 0, generic: 0, entwined:0)
 * Number of algebraic-loop strong components: ... 0 (linear: 0, nonlinear:0)
Notification: Performance of backend: time 3.374e-05/0.003434, allocations: 19.36 kB / 0.6499 GB, free: 37.34 MB / 0.5262 GB
Notification: Performance of SimCode: time 0.0002731/0.003707, allocations: 209.4 kB / 0.6501 GB, free: 37.2 MB / 0.5262 GB
Notification: Performance of Templates: time 0.00264/0.006347, allocations: 499.4 kB / 0.6506 GB, free: 37.16 MB / 0.5262 GB
"
[Timeout remaining time 660]
make -j1 -f Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1.makefile [Timeout 660]
(rm -f Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1.sim & ./Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 7.838337754132226]