Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.DevModels.PKTwoCompartmentModelOral.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002432/0.002432, allocations: 91.55 kB / 20.18 MB, free: 4.367 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002589/0.002589, allocations: 168.9 kB / 23.49 MB, free: 1.062 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.5/1.5, allocations: 177.1 MB / 203.8 MB, free: 5.609 MB / 186.7 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 3.256/3.256, allocations: 274.5 MB / 0.5222 GB, free: 14.25 MB / 458.7 MB " [Timeout remaining time 176] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.DevModels.PKTwoCompartmentModelOral,tolerance=1e-08,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.DevModels.PKTwoCompartmentModelOral") translateModel(Pharmacolibrary.DevModels.PKTwoCompartmentModelOral,tolerance=1e-08,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.DevModels.PKTwoCompartmentModelOral") [Timeout 660] "Notification: Performance of FrontEnd - Absyn->SCode: time 1.279e-05/1.279e-05, allocations: 3.625 kB / 0.6479 GB, free: 39.25 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.DevModels.PKTwoCompartmentModelOral): time 0.002521/0.002534, allocations: 2.389 MB / 0.6502 GB, free: 37.7 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.0008116/0.003345, allocations: 0.6162 MB / 0.6508 GB, free: 37.29 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 7.927e-05/0.003425, allocations: 3.719 kB / 0.6508 GB, free: 37.29 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 5.367e-05/0.003478, allocations: 29.72 kB / 0.6508 GB, free: 37.27 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0001802/0.003659, allocations: 78.94 kB / 0.6509 GB, free: 37.24 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.0001519/0.00381, allocations: 57.61 kB / 0.651 GB, free: 37.21 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.0002569/0.004067, allocations: 329.2 kB / 0.6513 GB, free: 37.07 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0001223/0.00419, allocations: 57.05 kB / 0.6513 GB, free: 37.04 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0001597/0.004349, allocations: 150.8 kB / 0.6515 GB, free: 36.98 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0001287/0.004478, allocations: 93.11 kB / 0.6516 GB, free: 36.95 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 3.777e-05/0.004516, allocations: 21.84 kB / 0.6516 GB, free: 36.95 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 4.138e-05/0.004557, allocations: 22.53 kB / 0.6516 GB, free: 36.95 MB / 0.5262 GB Notification: Performance of combineBinaries: time 0.0002307/0.004788, allocations: 364.9 kB / 0.652 GB, free: 36.74 MB / 0.5262 GB Notification: Performance of replaceArrayConstructors: time 7.733e-05/0.004865, allocations: 202.8 kB / 0.6522 GB, free: 36.62 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 4.113e-05/0.004906, allocations: 24.41 kB / 0.6522 GB, free: 36.62 MB / 0.5262 GB Notification: Performance of FrontEnd: time 1.718e-05/0.004923, allocations: 4.656 kB / 0.6522 GB, free: 36.62 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 45 (43) * Number of variables: 45 (45) Notification: Performance of [SIM] Bindings: time 0.0007753/0.005699, allocations: 1.026 MB / 0.6532 GB, free: 35.85 MB / 0.5262 GB Notification: Performance of [SIM] FunctionAlias: time 9.938e-05/0.005798, allocations: 133.9 kB / 0.6533 GB, free: 35.78 MB / 0.5262 GB Notification: Performance of [SIM] Early Inline: time 0.0003655/0.006164, allocations: 0.6098 MB / 0.6539 GB, free: 35.38 MB / 0.5262 GB Notification: Performance of [SIM] Simplify 1: time 0.0001166/0.00628, allocations: 114.3 kB / 0.654 GB, free: 35.31 MB / 0.5262 GB Notification: Performance of [SIM] Alias: time 0.0009586/0.007239, allocations: 0.8463 MB / 0.6549 GB, free: 34.77 MB / 0.5262 GB Notification: Performance of [SIM] Simplify 2: time 8.451e-05/0.007323, allocations: 98.16 kB / 0.6549 GB, free: 34.7 MB / 0.5262 GB Notification: Performance of [SIM] Remove Stream: time 6.752e-05/0.007391, allocations: 106.7 kB / 0.655 GB, free: 34.61 MB / 0.5262 GB Notification: Performance of [SIM] Detect States: time 0.000311/0.007702, allocations: 314 kB / 0.6553 GB, free: 34.37 MB / 0.5262 GB Notification: Performance of [SIM] Events: time 0.0001479/0.00785, allocations: 99.31 kB / 0.6554 GB, free: 34.33 MB / 0.5262 GB Notification: Performance of [SIM] Partitioning: time 0.000376/0.008226, allocations: 297.8 kB / 0.6557 GB, free: 34.15 MB / 0.5262 GB Notification: Performance of [SIM] Causalize: time 0.000862/0.009088, allocations: 0.6846 MB / 0.6564 GB, free: 33.8 MB / 0.5262 GB Notification: Performance of [SIM] After Index Reduction Inline: time 0.0002843/0.009372, allocations: 493.2 kB / 0.6569 GB, free: 33.52 MB / 0.5262 GB Notification: Performance of [INI] Simplify: time 0.000402/0.009774, allocations: 345.8 kB / 0.6572 GB, free: 33.3 MB / 0.5262 GB Notification: Performance of [INI] Inline: time 0.0003961/0.01017, allocations: 0.6569 MB / 0.6578 GB, free: 32.91 MB / 0.5262 GB Notification: Performance of [INI] Partitioning: time 2.919e-05/0.0102, allocations: 21.97 kB / 0.6579 GB, free: 32.89 MB / 0.5262 GB Notification: Performance of [INI] Cleanup: time 9.317e-05/0.01029, allocations: 158.9 kB / 0.658 GB, free: 32.79 MB / 0.5262 GB Error: Internal error NBResolveSingularities.balanceInitialization failed because following non-fixable variables could not be solved: [DISC] (1) discrete Real peripheral.Cmin (min = -1e-9) [DISC] (1) discrete Real peripheral.Cmax (min = -1e-9) [DISC] (1) discrete Real central.Cmin (min = -1e-9) [DISC] (1) discrete Real central.Cmax (min = -1e-9) Following equations were created by fixing variables: [SCAL] (1) $PRE.central.rising = $START.central.rising; ($RES_SRT_88) [SCAL] (1) $PRE.peripheral.rising = $START.peripheral.rising; ($RES_SRT_87) [SCAL] (1) periodicDose1.variableDose.TotalCumulativeMass = $START.periodicDose1.variableDose.TotalCumulativeMass; ($RES_SRT_86) [SCAL] (1) periodicDose1.TotalCumulativeMass = $START.periodicDose1.TotalCumulativeMass; ($RES_SRT_85) [SCAL] (1) peripheral.AUC = $START.peripheral.AUC; ($RES_SRT_84) [SCAL] (1) central.AUC = $START.central.AUC; ($RES_SRT_83) Use -d=bltdump for more verbose debug output. Error: Internal error NBInitialization.main failed to apply modules! " [Timeout remaining time 660] [Calling sys.exit(0), Time elapsed: 5.727593593066558]