Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002303/0.002303, allocations: 88.84 kB / 20.18 MB, free: 4.367 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002573/0.002573, allocations: 168.9 kB / 23.49 MB, free: 1.062 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.481/1.481, allocations: 177.1 MB / 203.8 MB, free: 5.637 MB / 186.7 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 3.322/3.322, allocations: 274.5 MB / 0.5222 GB, free: 14.17 MB / 458.7 MB " [Timeout remaining time 176] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison,tolerance=1e-08,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison") translateModel(Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison,tolerance=1e-08,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison") [Timeout 660] "Notification: Performance of FrontEnd - Absyn->SCode: time 1.286e-05/1.286e-05, allocations: 2.312 kB / 0.6479 GB, free: 39.04 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison): time 0.003083/0.003096, allocations: 3.393 MB / 0.6512 GB, free: 36.84 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.001004/0.0041, allocations: 0.8377 MB / 0.652 GB, free: 36.27 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001174/0.004217, allocations: 10.06 kB / 0.652 GB, free: 36.27 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 8.651e-05/0.004304, allocations: 60.55 kB / 0.6521 GB, free: 36.24 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0002776/0.004581, allocations: 174 kB / 0.6522 GB, free: 36.14 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.0002206/0.004802, allocations: 124.8 kB / 0.6524 GB, free: 36.07 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.0004248/0.005227, allocations: 0.6736 MB / 0.653 GB, free: 35.73 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0001717/0.005398, allocations: 97.08 kB / 0.6531 GB, free: 35.67 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.000267/0.005665, allocations: 325.2 kB / 0.6534 GB, free: 35.54 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0002123/0.005878, allocations: 182 kB / 0.6536 GB, free: 35.48 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 6.43e-05/0.005942, allocations: 48.38 kB / 0.6536 GB, free: 35.48 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 7.842e-05/0.00602, allocations: 46.03 kB / 0.6537 GB, free: 35.48 MB / 0.5262 GB Notification: Performance of combineBinaries: time 0.0004488/0.006469, allocations: 0.763 MB / 0.6544 GB, free: 35.05 MB / 0.5262 GB Notification: Performance of replaceArrayConstructors: time 0.0002224/0.006692, allocations: 425.8 kB / 0.6548 GB, free: 34.8 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 7.185e-05/0.006763, allocations: 50.62 kB / 0.6549 GB, free: 34.8 MB / 0.5262 GB Notification: Performance of FrontEnd: time 3.108e-05/0.006795, allocations: 9.938 kB / 0.6549 GB, free: 34.8 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 96 (92) * Number of variables: 96 (96) Notification: Performance of [SIM] Bindings: time 0.001602/0.008397, allocations: 2.002 MB / 0.6569 GB, free: 33.43 MB / 0.5262 GB Notification: Performance of [SIM] FunctionAlias: time 0.0001709/0.008568, allocations: 267.1 kB / 0.6571 GB, free: 33.29 MB / 0.5262 GB Notification: Performance of [SIM] Early Inline: time 0.0007421/0.00931, allocations: 1.241 MB / 0.6583 GB, free: 32.52 MB / 0.5262 GB Notification: Performance of [SIM] Simplify 1: time 0.0002079/0.009518, allocations: 213.4 kB / 0.6585 GB, free: 32.41 MB / 0.5262 GB Notification: Performance of [SIM] Alias: time 0.001781/0.0113, allocations: 1.716 MB / 0.6602 GB, free: 31.41 MB / 0.5262 GB Notification: Performance of [SIM] Simplify 2: time 0.0001603/0.01146, allocations: 179.5 kB / 0.6604 GB, free: 31.31 MB / 0.5262 GB Notification: Performance of [SIM] Remove Stream: time 0.0001222/0.01158, allocations: 169.8 kB / 0.6605 GB, free: 31.19 MB / 0.5262 GB Notification: Performance of [SIM] Detect States: time 0.0005113/0.01209, allocations: 0.5432 MB / 0.6611 GB, free: 30.82 MB / 0.5262 GB Notification: Performance of [SIM] Events: time 0.0002349/0.01233, allocations: 240.2 kB / 0.6613 GB, free: 30.72 MB / 0.5262 GB Notification: Performance of [SIM] Partitioning: time 0.0005319/0.01286, allocations: 0.5584 MB / 0.6618 GB, free: 30.39 MB / 0.5262 GB Notification: Performance of [SIM] Causalize: time 0.001479/0.01434, allocations: 1.49 MB / 0.6633 GB, free: 29.62 MB / 0.5262 GB Notification: Performance of [SIM] After Index Reduction Inline: time 0.0005703/0.01491, allocations: 0.9795 MB / 0.6643 GB, free: 29.05 MB / 0.5262 GB Notification: Performance of [INI] Simplify: time 0.0007145/0.01562, allocations: 0.6024 MB / 0.6648 GB, free: 28.72 MB / 0.5262 GB Notification: Performance of [INI] Inline: time 0.0007967/0.01642, allocations: 1.38 MB / 0.6662 GB, free: 27.89 MB / 0.5262 GB Notification: Performance of [INI] Partitioning: time 5.65e-05/0.01648, allocations: 43.55 kB / 0.6662 GB, free: 27.87 MB / 0.5262 GB Notification: Performance of [INI] Cleanup: time 0.0001826/0.01666, allocations: 317.7 kB / 0.6665 GB, free: 27.67 MB / 0.5262 GB Error: Internal error NBResolveSingularities.balanceInitialization failed because following non-fixable variables could not be solved: [DISC] (1) discrete Real peripheral.Cmin (min = -1e-9) [DISC] (1) discrete Real peripheral.Cmax (min = -1e-9) [DISC] (1) discrete Real central2.Cmin (min = -1e-9) [DISC] (1) discrete Real central2.Cmax (min = -1e-9) [DISC] (1) discrete Real central.Cmin (min = -1e-9) [DISC] (1) discrete Real central.Cmax (min = -1e-9) [DISC] (1) discrete Real git.Cmin (min = -1e-9) [DISC] (1) discrete Real git.Cmax (min = -1e-9) Following equations were created by fixing variables: [SCAL] (1) $PRE.git.rising = $START.git.rising; ($RES_SRT_188) [SCAL] (1) $PRE.central.rising = $START.central.rising; ($RES_SRT_187) [SCAL] (1) $PRE.central2.rising = $START.central2.rising; ($RES_SRT_186) [SCAL] (1) $PRE.peripheral.rising = $START.peripheral.rising; ($RES_SRT_185) [SCAL] (1) periodicDose1.variableDose.TotalCumulativeMass = $START.periodicDose1.variableDose.TotalCumulativeMass; ($RES_SRT_184) [SCAL] (1) periodicDose1.TotalCumulativeMass = $START.periodicDose1.TotalCumulativeMass; ($RES_SRT_183) [SCAL] (1) peripheral.AUC = $START.peripheral.AUC; ($RES_SRT_182) [SCAL] (1) central2.AUC = $START.central2.AUC; ($RES_SRT_181) [SCAL] (1) central.AUC = $START.central.AUC; ($RES_SRT_180) [SCAL] (1) git.AUC = $START.git.AUC; ($RES_SRT_179) [SCAL] (1) periodicDose.variableDose.TotalCumulativeMass = $START.periodicDose.variableDose.TotalCumulativeMass; ($RES_SRT_178) [SCAL] (1) periodicDose.TotalCumulativeMass = $START.periodicDose.TotalCumulativeMass; ($RES_SRT_177) Use -d=bltdump for more verbose debug output. Error: Internal error NBInitialization.main failed to apply modules! " [Timeout remaining time 660] [Calling sys.exit(0), Time elapsed: 5.782906426116824]