Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001411/0.001411, allocations: 104.3 kB / 19.72 MB, free: 2.145 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001533/0.001533, allocations: 209.3 kB / 23.01 MB, free: 4.961 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.335/1.335, allocations: 230.6 MB / 256.8 MB, free: 7.824 MB / 206.1 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1269/0.1269, allocations: 23.89 MB / 337.1 MB, free: 10.99 MB / 270.1 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery") translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery") [Timeout 660] "Notification: Performance of FrontEnd - Absyn->SCode: time 1.912e-05/1.912e-05, allocations: 6.219 kB / 472.4 MB, free: 7.059 MB / 334.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery): time 0.08378/0.0838, allocations: 40 MB / 0.5003 GB, free: 15.13 MB / 382.1 MB Notification: Performance of NFInst.instExpressions: time 0.2265/0.3103, allocations: 64.09 MB / 0.5629 GB, free: 8.934 MB / 382.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.003343/0.3136, allocations: 79.91 kB / 0.563 GB, free: 8.895 MB / 382.1 MB Notification: Performance of NFTyping.typeComponents: time 0.003233/0.3169, allocations: 1.478 MB / 0.5644 GB, free: 7.762 MB / 382.1 MB Notification: Performance of NFTyping.typeBindings: time 0.01466/0.3315, allocations: 5.991 MB / 0.5703 GB, free: 3.191 MB / 382.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.02594/0.3575, allocations: 10.4 MB / 0.5805 GB, free: 11.26 MB / 398.1 MB Notification: Performance of NFFlatten.flatten: time 0.02994/0.3874, allocations: 30.19 MB / 0.6099 GB, free: 13.4 MB / 430.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.01757/0.405, allocations: 12.66 MB / 0.6223 GB, free: 0.6523 MB / 430.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.01584/0.4208, allocations: 10.55 MB / 0.6326 GB, free: 6.09 MB / 446.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.01662/0.4374, allocations: 10.62 MB / 0.643 GB, free: 11.48 MB / 462.1 MB Notification: Performance of NFPackage.collectConstants: time 0.005623/0.4431, allocations: 1.949 MB / 0.6449 GB, free: 9.535 MB / 462.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.02745/0.4705, allocations: 9.347 MB / 0.654 GB, free: 180 kB / 462.1 MB Notification: Performance of combineBinaries: time 0.03158/0.5021, allocations: 22.14 MB / 0.6756 GB, free: 9.906 MB / 494.1 MB Notification: Performance of replaceArrayConstructors: time 0.01121/0.5133, allocations: 9.847 MB / 0.6853 GB, free: 15.99 MB / 0.4981 GB Notification: Performance of NFVerifyModel.verify: time 0.003381/0.5167, allocations: 0.6445 MB / 0.6859 GB, free: 15.35 MB / 0.4981 GB Notification: Performance of FrontEnd: time 0.0009093/0.5176, allocations: 247.5 kB / 0.6861 GB, free: 15.11 MB / 0.4981 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 3808 (1968) * Number of variables: 3808 (1240) Notification: Performance of [SIM] Bindings: time 0.2874/0.805, allocations: 68.13 MB / 0.7527 GB, free: 72.52 MB / 0.5137 GB Notification: Performance of [SIM] FunctionAlias: time 0.01766/0.8227, allocations: 11.22 MB / 0.7636 GB, free: 67.54 MB / 0.5137 GB Notification: Performance of [SIM] Early Inline: time 0.08256/0.9052, allocations: 70.43 MB / 0.8324 GB, free: 26.76 MB / 0.5137 GB Notification: Performance of [SIM] Simplify 1: time 0.02178/0.927, allocations: 9.484 MB / 0.8416 GB, free: 19.18 MB / 0.5137 GB Warning: NBAlias.setStartFixed: Alias set with conflicting unfixed start values detected. Use -d=dumprepl for more information. Notification: Performance of [SIM] Alias: time 0.05805/0.9851, allocations: 36.69 MB / 0.8775 GB, free: 14.83 MB / 0.545 GB Notification: Performance of [SIM] Simplify 2: time 0.01911/1.004, allocations: 9.402 MB / 0.8867 GB, free: 5.504 MB / 0.545 GB Notification: Performance of [SIM] Remove Stream: time 0.0145/1.019, allocations: 8.395 MB / 0.8949 GB, free: 13.97 MB / 0.5606 GB Notification: Performance of [SIM] Detect States: time 0.01798/1.037, allocations: 12.3 MB / 0.9069 GB, free: 2.016 MB / 0.5606 GB Notification: Performance of [SIM] Events: time 0.006152/1.043, allocations: 3.486 MB / 0.9103 GB, free: 14.68 MB / 0.5762 GB Notification: Performance of [SIM] Partitioning: time 0.2755/1.318, allocations: 23.24 MB / 0.933 GB, free: 118.7 MB / 0.5762 GB Error: Internal error NBResolveSingularities.indexReduction failed because slicing during index reduction is not yet supported. needed sliced dummy: [STAT] (4) flow Real[4] tensed.HmNHCOO.solution.dV slice: {0} " [Timeout remaining time 658] [Calling sys.exit(0), Time elapsed: 4.112332367803901] Failed to read output from testmodel.py, exit status != 0: 1.8612156100571156 1.870505029 1.350476522 Calling exit ...