Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.CellDivison.cell.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false) Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(BioChem.Examples.CellDivison.cell,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.CellDivison.cell") translateModel(BioChem.Examples.CellDivison.cell,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.CellDivison.cell") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001208/0.001207, allocations: 105.8 kB / 16.42 MB, free: 6.461 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001084/0.001085, allocations: 189.9 kB / 17.36 MB, free: 5.73 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.493/1.493, allocations: 222.9 MB / 241 MB, free: 15.16 MB / 206.1 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.06439/0.06439, allocations: 12.27 MB / 303.5 MB, free: 3.234 MB / 238.1 MB Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl" Notification: Performance of FrontEnd - Absyn->SCode: time 2.113e-05/2.114e-05, allocations: 2.281 kB / 420.7 MB, free: 17.2 MB / 302.1 MB Notification: Performance of NFInst.instantiate(BioChem.Examples.CellDivison.cell): time 0.005814/0.005844, allocations: 5.787 MB / 426.5 MB, free: 11.41 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.0004417/0.006312, allocations: 464.6 kB / 426.9 MB, free: 10.95 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001523/0.006472, allocations: 24 kB / 426.9 MB, free: 10.93 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0001218/0.0066, allocations: 83.33 kB / 427 MB, free: 10.85 MB / 302.1 MB Notification: Performance of NFTyping.typeBindings: time 0.0002254/0.006833, allocations: 113.9 kB / 427.1 MB, free: 10.74 MB / 302.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.0002283/0.007114, allocations: 105.2 kB / 427.2 MB, free: 10.64 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.0003292/0.007451, allocations: 0.5133 MB / 427.7 MB, free: 10.12 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0003192/0.007778, allocations: 258.1 kB / 428 MB, free: 9.871 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.0001191/0.007904, allocations: 187.4 kB / 428.2 MB, free: 9.688 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.0001505/0.00806, allocations: 231 kB / 428.4 MB, free: 9.461 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 5.085e-05/0.008117, allocations: 48 kB / 428.5 MB, free: 9.414 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 5.882e-05/0.008182, allocations: 52 kB / 428.5 MB, free: 9.363 MB / 302.1 MB Notification: Performance of combineBinaries: time 0.0003329/0.00852, allocations: 0.7377 MB / 429.2 MB, free: 8.617 MB / 302.1 MB Notification: Performance of replaceArrayConstructors: time 0.0001316/0.008659, allocations: 457 kB / 429.7 MB, free: 8.164 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 6.097e-05/0.008725, allocations: 87.69 kB / 429.8 MB, free: 8.078 MB / 302.1 MB Notification: Performance of FrontEnd: time 5.692e-05/0.008788, allocations: 19.88 kB / 429.8 MB, free: 8.059 MB / 302.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 148 (148) * Number of variables: 148 (148) Notification: Performance of Bindings: time 0.001328/0.01012, allocations: 2.332 MB / 432.1 MB, free: 5.586 MB / 302.1 MB Notification: Performance of FunctionAlias: time 6.705e-05/0.0102, allocations: 111.8 kB / 432.2 MB, free: 5.477 MB / 302.1 MB Notification: Performance of Early Inline: time 0.0007826/0.01098, allocations: 1.28 MB / 433.5 MB, free: 4.156 MB / 302.1 MB Notification: Performance of simplify1: time 7.125e-05/0.01106, allocations: 115.9 kB / 433.6 MB, free: 4.043 MB / 302.1 MB Notification: Performance of Alias: time 0.002484/0.01355, allocations: 3.147 MB / 436.8 MB, free: 0.5625 MB / 302.1 MB Notification: Performance of simplify2: time 3.911e-05/0.01361, allocations: 55.94 kB / 436.8 MB, free: 0.5078 MB / 302.1 MB Notification: Performance of Events: time 3.389e-05/0.01365, allocations: 59.88 kB / 436.9 MB, free: 460 kB / 302.1 MB Notification: Performance of Detect States: time 0.0002311/0.01388, allocations: 247.4 kB / 437.1 MB, free: 200 kB / 302.1 MB Notification: Performance of Partitioning: time 0.0003035/0.01419, allocations: 301.8 kB / 437.4 MB, free: 15.89 MB / 318.1 MB Notification: Performance of Causalize: time 0.001265/0.01547, allocations: 1.127 MB / 438.6 MB, free: 14.76 MB / 318.1 MB Notification: Performance of After Index Reduction Inline: time 0.0005028/0.01598, allocations: 0.558 MB / 439.1 MB, free: 14.17 MB / 318.1 MB Notification: Performance of Inline: time 0.0007696/0.01676, allocations: 0.858 MB / 440 MB, free: 13.28 MB / 318.1 MB Notification: Performance of Partitioning: time 7.014e-05/0.01684, allocations: 66.38 kB / 440 MB, free: 13.21 MB / 318.1 MB Notification: Performance of Cleanup: time 3.463e-05/0.01688, allocations: 43.89 kB / 440.1 MB, free: 13.16 MB / 318.1 MB Notification: Performance of Causalize: time 0.002984/0.01987, allocations: 2.591 MB / 442.7 MB, free: 10.54 MB / 318.1 MB Notification: Performance of Tearing: time 1.017e-05/0.01989, allocations: 0 / 442.7 MB, free: 10.54 MB / 318.1 MB Notification: Performance of Initialization: time 1.062e-06/0.0199, allocations: 4 kB / 442.7 MB, free: 10.54 MB / 318.1 MB Notification: Performance of Tearing: time 2.474e-06/0.01991, allocations: 0 / 442.7 MB, free: 10.54 MB / 318.1 MB Notification: Performance of Categorize: time 1.193e-05/0.01992, allocations: 0 / 442.7 MB, free: 10.54 MB / 318.1 MB Notification: Performance of Solve: time 0.0007111/0.02064, allocations: 0.7441 MB / 443.4 MB, free: 9.699 MB / 318.1 MB Notification: Performance of Jacobian: time 0.0005336/0.02118, allocations: 0.5741 MB / 444 MB, free: 9.09 MB / 318.1 MB Notification: Partition statistics after passing the back-end: * Number of ODE partitions: ..................... 0 * Number of algebraic partitions: ............... 0 * Number of ODE event partitions: ............... 1 * Number of algebraic event partitions: ......... 0 * Number of clocked partitions: ................. 0 * Number of initial partitions: ................. 1 * Number of initial(lambda=0) partitions: ....... 0 Notification: Variable statistics after passing the back-end: * Number of states: ............................. 8 (8) {EmptySet.n, C2.n, CP.n, M.n, pM.n, Y.n, YP.n, cell_V} * Number of discrete states: .................... 0 (0) {} * Number of clocked states: ..................... 0 (0) {NOT YET AVAILABLE} * Number of discrete variables: ................. 0 (0) {} * Number of top-level inputs: ................... 0 (0) {} Notification: [Simulation] Strong Component statistics after passing the back-end: * Number of single strong components: ........... 53 (scalar:53, array:0, record:0) * Number of multi strong components: ............ 0 (algorithm:0, when:0, if:0, tuple:0) * Number of for-loop strong components: ......... 0 (generic: 0, entwined:0) * Number of algebraic-loop strong components: ... 2 (linear: 0, nonlinear:2) Notification: [Initialization] Strong Component statistics after passing the back-end: * Number of single strong components: ........... 61 (scalar:61, array:0, record:0) * Number of multi strong components: ............ 0 (algorithm:0, when:0, if:0, tuple:0) * Number of for-loop strong components: ......... 0 (generic: 0, entwined:0) * Number of algebraic-loop strong components: ... 2 (linear: 0, nonlinear:2) Notification: Performance of backend: time 5.781e-05/0.02125, allocations: 32.5 kB / 444 MB, free: 9.062 MB / 318.1 MB Notification: Performance of SimCode: time 0.00172/0.02298, allocations: 1.912 MB / 445.9 MB, free: 7.113 MB / 318.1 MB Notification: Performance of Templates: time 0.005642/0.02863, allocations: 2.264 MB / 448.2 MB, free: 4.848 MB / 318.1 MB make -j1 -f BioChem_BioChem.Examples.CellDivison.cell.makefile (rm -f BioChem_BioChem.Examples.CellDivison.cell.pipe ; mkfifo BioChem_BioChem.Examples.CellDivison.cell.pipe ; head -c 1048576 < BioChem_BioChem.Examples.CellDivison.cell.pipe >> ../files/BioChem_BioChem.Examples.CellDivison.cell.sim & ./BioChem_BioChem.Examples.CellDivison.cell -abortSlowSimulation -alarm=480 -lv LOG_STATS > BioChem_BioChem.Examples.CellDivison.cell.pipe 2>&1)