Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.000991/0.000991, allocations: 91.55 kB / 20.19 MB, free: 4.352 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001029/0.001029, allocations: 169 kB / 23.5 MB, free: 1.047 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9377/0.9377, allocations: 177.1 MB / 203.8 MB, free: 5.629 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.595/1.595, allocations: 273.5 MB / 0.5213 GB, free: 14.86 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.PK_Lithium.PGx_experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment") translateModel(Pharmacolibrary.Examples.PK_Lithium.PGx_experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.675e-06/2.675e-06, allocations: 1.25 kB / 0.647 GB, free: 38.66 MB / 0.5262 GB Notification: Performance of FrontEnd - Absyn->SCode: time 2.206e-05/2.474e-05, allocations: 2.312 kB / 0.647 GB, free: 38.66 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.PK_Lithium.PGx_experiment): time 0.007173/0.007198, allocations: 11.13 MB / 0.6578 GB, free: 31.35 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.003857/0.01105, allocations: 2.257 MB / 0.66 GB, free: 29.74 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.001002/0.01206, allocations: 16.69 kB / 0.6601 GB, free: 29.73 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0004305/0.01249, allocations: 233.8 kB / 0.6603 GB, free: 29.59 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.001001/0.01349, allocations: 0.6841 MB / 0.661 GB, free: 29.08 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.001012/0.0145, allocations: 0.6238 MB / 0.6616 GB, free: 28.63 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.001919/0.01642, allocations: 2.675 MB / 0.6642 GB, free: 27.07 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0005095/0.01693, allocations: 368.2 kB / 0.6645 GB, free: 26.82 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.001249/0.01818, allocations: 1.357 MB / 0.6659 GB, free: 26.13 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0007229/0.0189, allocations: 0.747 MB / 0.6666 GB, free: 25.84 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0002199/0.01912, allocations: 279.1 kB / 0.6668 GB, free: 25.84 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0002531/0.01937, allocations: 280.8 kB / 0.6671 GB, free: 25.84 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 0.0001834/0.01956, allocations: 451.9 kB / 0.6675 GB, free: 25.5 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0005468/0.0201, allocations: 0.7627 MB / 0.6683 GB, free: 25.11 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.001237/0.02134, allocations: 1.596 MB / 0.6698 GB, free: 24.16 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 7.584e-06/0.02135, allocations: 0 / 0.6698 GB, free: 24.16 MB / 0.5262 GB Notification: Performance of FrontEnd: time 1.954e-06/0.02135, allocations: 0 / 0.6698 GB, free: 24.16 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 1.923e-05/0.02137, allocations: 1.438 kB / 0.6699 GB, free: 24.16 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 288 * Number of variables: 288 Notification: Performance of Generate backend data structure: time 0.002508/0.02388, allocations: 2.551 MB / 0.6723 GB, free: 22.24 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 5.592e-05/0.02393, allocations: 9.875 kB / 0.6724 GB, free: 22.24 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0004592/0.02439, allocations: 283.8 kB / 0.6726 GB, free: 22.11 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.001103/0.0255, allocations: 0.8321 MB / 0.6734 GB, free: 21.5 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 5.984e-05/0.02556, allocations: 92.83 kB / 0.6735 GB, free: 21.46 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001688/0.02572, allocations: 146.3 kB / 0.6737 GB, free: 21.41 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.001519/0.02724, allocations: 1.342 MB / 0.675 GB, free: 20.57 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 4.876e-05/0.02729, allocations: 21.11 kB / 0.675 GB, free: 20.56 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 7.615e-05/0.02737, allocations: 52.84 kB / 0.675 GB, free: 20.53 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.198e-05/0.02739, allocations: 30.44 kB / 0.6751 GB, free: 20.52 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001079/0.02847, allocations: 0.9284 MB / 0.676 GB, free: 20.05 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.003453/0.03192, allocations: 4.181 MB / 0.6801 GB, free: 16.99 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.001335/0.03326, allocations: 1.151 MB / 0.6812 GB, free: 16.25 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0005475/0.03381, allocations: 0.6726 MB / 0.6818 GB, free: 15.73 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 6.603e-05/0.03387, allocations: 37.02 kB / 0.6819 GB, free: 15.72 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001317/0.03519, allocations: 1.92 MB / 0.6838 GB, free: 14.26 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=198): time 3.887e-06/0.03519, allocations: 0 / 0.6838 GB, free: 14.26 MB / 0.5262 GB Notification: Performance of matching and sorting (n=210): time 0.005825/0.04102, allocations: 6.454 MB / 0.6901 GB, free: 9.727 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.000174/0.04119, allocations: 1.169 MB / 0.6912 GB, free: 8.352 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0009356/0.04213, allocations: 0.8978 MB / 0.6921 GB, free: 7.961 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 0.0001053/0.04223, allocations: 101.3 kB / 0.6922 GB, free: 7.887 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0002859/0.04252, allocations: 0.5753 MB / 0.6927 GB, free: 7.414 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0003517/0.04287, allocations: 0.6849 MB / 0.6934 GB, free: 6.863 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004215/0.04329, allocations: 375.8 kB / 0.6938 GB, free: 6.691 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 3.388e-05/0.04332, allocations: 480.7 kB / 0.6942 GB, free: 6.219 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.000781/0.04411, allocations: 0.8902 MB / 0.6951 GB, free: 5.535 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0009585/0.04506, allocations: 1.726 MB / 0.6968 GB, free: 3.672 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.002083/0.04715, allocations: 3.097 MB / 0.6998 GB, free: 0.7266 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.541e-05/0.04716, allocations: 8.094 kB / 0.6998 GB, free: 0.7227 MB / 0.5262 GB Notification: Performance of matching and sorting (n=318) (initialization): time 0.002691/0.04985, allocations: 2.727 MB / 0.7025 GB, free: 13.84 MB / 0.5418 GB Notification: Performance of prepare postOptimizeDAE: time 0.0002126/0.05007, allocations: 0.5143 MB / 0.703 GB, free: 13.21 MB / 0.5418 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.937e-05/0.05009, allocations: 16 kB / 0.703 GB, free: 13.2 MB / 0.5418 GB Notification: Performance of postOpt tearingSystem (initialization): time 3.9e-05/0.05012, allocations: 28 kB / 0.703 GB, free: 13.17 MB / 0.5418 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.00104/0.05116, allocations: 0.4953 MB / 0.7035 GB, free: 12.67 MB / 0.5418 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 3.412e-05/0.0512, allocations: 40.05 kB / 0.7035 GB, free: 12.63 MB / 0.5418 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0008998/0.0521, allocations: 112 kB / 0.7036 GB, free: 12.52 MB / 0.5418 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001129/0.05221, allocations: 104 kB / 0.7037 GB, free: 12.42 MB / 0.5418 GB Warning: Assuming fixed start value for the following 60 variables: low_clearance.pK_lower.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real low_clearance.pK_lower.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real low_clearance.pK_lower.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real low_clearance.pK_lower.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real low_clearance.pK_1C_Lithium_upper.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real low_clearance.pK_1C_Lithium_upper.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real low_clearance.pK_1C_Lithium_upper.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real low_clearance.pK_1C_Lithium.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real low_clearance.pK_1C_Lithium.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real low_clearance.pK_1C_Lithium.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.pK_lower.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.pK_lower.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.pK_lower.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.pK_lower.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.pK_1C_Lithium_upper.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.pK_1C_Lithium_upper.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.pK_1C_Lithium_upper.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.pK_1C_Lithium.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.pK_1C_Lithium.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.pK_1C_Lithium.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.pK_1C_Lithium.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.pK_1C_Lithium.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_1C_Lithium.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_1C_Lithium.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_1C_Lithium.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_1C_Lithium_upper.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_1C_Lithium_upper.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_lower.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_lower.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_lower.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_lower.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_1C_Lithium.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_1C_Lithium.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_1C_Lithium_upper.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_1C_Lithium_upper.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_lower.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_lower.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_lower.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real low_clearance.pK_lower.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.pK_1C_Lithium.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.pK_1C_Lithium.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.pK_1C_Lithium_upper.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.pK_lower.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.pK_lower.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean low_clearance.pK_1C_Lithium.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean low_clearance.pK_1C_Lithium_upper.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean low_clearance.pK_lower.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean low_clearance.pK_lower.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 72 * Number of states: 0 () * Number of discrete variables: 126 ($PRE.normal.pK_1C_Lithium.central.Cmin,normal.pK_1C_Lithium.central.Cmin,$PRE.normal.pK_1C_Lithium.central.Cmax,normal.pK_1C_Lithium.central.Cmax,$PRE.normal.pK_1C_Lithium.periodicDose.absorptionLumen.Cmin,normal.pK_1C_Lithium.periodicDose.absorptionLumen.Cmin,$PRE.normal.pK_1C_Lithium.periodicDose.absorptionLumen.Cmax,normal.pK_1C_Lithium.periodicDose.absorptionLumen.Cmax,$PRE.normal.pK_1C_Lithium_upper.central.Cmin,normal.pK_1C_Lithium_upper.central.Cmin,$PRE.normal.pK_1C_Lithium_upper.central.Cmax,normal.pK_1C_Lithium_upper.central.Cmax,$PRE.normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmin,normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmin,$PRE.normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmax,normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmax,$PRE.normal.pK_lower.central.Cmin,normal.pK_lower.central.Cmin,$PRE.normal.pK_lower.central.Cmax,normal.pK_lower.central.Cmax,$PRE.normal.pK_lower.periodicDose.absorptionLumen.Cmin,normal.pK_lower.periodicDose.absorptionLumen.Cmin,$PRE.normal.pK_lower.periodicDose.absorptionLumen.Cmax,normal.pK_lower.periodicDose.absorptionLumen.Cmax,$PRE.low_clearance.pK_1C_Lithium.central.Cmin,low_clearance.pK_1C_Lithium.central.Cmin,$PRE.low_clearance.pK_1C_Lithium.central.Cmax,low_clearance.pK_1C_Lithium.central.Cmax,$PRE.low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.Cmin,low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.Cmin,$PRE.low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.Cmax,low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.Cmax,$PRE.low_clearance.pK_1C_Lithium_upper.central.Cmin,low_clearance.pK_1C_Lithium_upper.central.Cmin,$PRE.low_clearance.pK_1C_Lithium_upper.central.Cmax,low_clearance.pK_1C_Lithium_upper.central.Cmax,$PRE.low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmin,low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmin,$PRE.low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmax,low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.Cmax,$PRE.low_clearance.pK_lower.central.Cmin,low_clearance.pK_lower.central.Cmin,$PRE.low_clearance.pK_lower.central.Cmax,low_clearance.pK_lower.central.Cmax,$PRE.low_clearance.pK_lower.periodicDose.absorptionLumen.Cmin,low_clearance.pK_lower.periodicDose.absorptionLumen.Cmin,$PRE.low_clearance.pK_lower.periodicDose.absorptionLumen.Cmax,low_clearance.pK_lower.periodicDose.absorptionLumen.Cmax,$PRE.normal.pK_1C_Lithium.periodicDose.pulse.count,$PRE.normal.pK_1C_Lithium.periodicDose.pulse.T_start,$PRE.normal.pK_1C_Lithium.periodicDose.absorptionLumen.rising,$PRE.normal.pK_1C_Lithium.central.rising,normal.pK_1C_Lithium.periodicDose.pulse.count,normal.pK_1C_Lithium.periodicDose.pulse.T_start,normal.pK_1C_Lithium.periodicDose.absorptionLumen.rising,normal.pK_1C_Lithium.central.rising,$whenCondition30,$whenCondition29,$whenCondition28,$whenCondition27,$whenCondition26,$PRE.normal.pK_1C_Lithium_upper.periodicDose.pulse.count,$PRE.normal.pK_1C_Lithium_upper.periodicDose.pulse.T_start,$PRE.normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.rising,$PRE.normal.pK_1C_Lithium_upper.central.rising,normal.pK_1C_Lithium_upper.periodicDose.pulse.count,normal.pK_1C_Lithium_upper.periodicDose.pulse.T_start,normal.pK_1C_Lithium_upper.periodicDose.absorptionLumen.rising,normal.pK_1C_Lithium_upper.central.rising,$whenCondition25,$whenCondition24,$whenCondition23,$whenCondition22,$whenCondition21,$PRE.normal.pK_lower.periodicDose.pulse.count,$PRE.normal.pK_lower.periodicDose.pulse.T_start,$PRE.normal.pK_lower.periodicDose.absorptionLumen.rising,$PRE.normal.pK_lower.central.rising,normal.pK_lower.periodicDose.pulse.count,normal.pK_lower.periodicDose.pulse.T_start,normal.pK_lower.periodicDose.absorptionLumen.rising,normal.pK_lower.central.rising,$whenCondition20,$whenCondition19,$whenCondition18,$whenCondition17,$whenCondition16,$PRE.low_clearance.pK_1C_Lithium.periodicDose.pulse.count,$PRE.low_clearance.pK_1C_Lithium.periodicDose.pulse.T_start,$PRE.low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.rising,$PRE.low_clearance.pK_1C_Lithium.central.rising,low_clearance.pK_1C_Lithium.periodicDose.pulse.count,low_clearance.pK_1C_Lithium.periodicDose.pulse.T_start,low_clearance.pK_1C_Lithium.periodicDose.absorptionLumen.rising,low_clearance.pK_1C_Lithium.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.low_clearance.pK_1C_Lithium_upper.periodicDose.pulse.count,$PRE.low_clearance.pK_1C_Lithium_upper.periodicDose.pulse.T_start,$PRE.low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.rising,$PRE.low_clearance.pK_1C_Lithium_upper.central.rising,low_clearance.pK_1C_Lithium_upper.periodicDose.pulse.count,low_clearance.pK_1C_Lithium_upper.periodicDose.pulse.T_start,low_clearance.pK_1C_Lithium_upper.periodicDose.absorptionLumen.rising,low_clearance.pK_1C_Lithium_upper.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.low_clearance.pK_lower.periodicDose.pulse.count,$PRE.low_clearance.pK_lower.periodicDose.pulse.T_start,$PRE.low_clearance.pK_lower.periodicDose.absorptionLumen.rising,$PRE.low_clearance.pK_lower.central.rising,low_clearance.pK_lower.periodicDose.pulse.count,low_clearance.pK_lower.periodicDose.pulse.T_start,low_clearance.pK_lower.periodicDose.absorptionLumen.rising,low_clearance.pK_lower.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (300): * Single equations (assignments): 282 * Array equations: 0 * Algorithm blocks: 18 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.001195/0.05341, allocations: 1.001 MB / 0.7047 GB, free: 11.39 MB / 0.5418 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.000297/0.0537, allocations: 255 kB / 0.705 GB, free: 11.14 MB / 0.5418 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001678/0.05387, allocations: 157.6 kB / 0.7051 GB, free: 10.98 MB / 0.5418 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.407e-05/0.05388, allocations: 11.95 kB / 0.7051 GB, free: 10.97 MB / 0.5418 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.41e-06/0.05389, allocations: 8 kB / 0.7051 GB, free: 10.96 MB / 0.5418 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0005931/0.05448, allocations: 382.8 kB / 0.7055 GB, free: 10.59 MB / 0.5418 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002451/0.05473, allocations: 104 kB / 0.7056 GB, free: 10.49 MB / 0.5418 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0004461/0.05517, allocations: 83.88 kB / 0.7057 GB, free: 10.41 MB / 0.5418 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003461/0.05552, allocations: 203.6 kB / 0.7059 GB, free: 10.21 MB / 0.5418 GB Notification: Performance of postOpt createDAEmodeBDAE (simulation): time 0.002936/0.05846, allocations: 2.999 MB / 0.7088 GB, free: 7.047 MB / 0.5418 GB Notification: Performance of postOpt symbolicJacobianDAE (simulation): time 0.003709/0.06217, allocations: 3.904 MB / 0.7126 GB, free: 2.898 MB / 0.5418 GB Notification: Performance of postOpt setEvaluationStage (simulation): time 0.0008558/0.06302, allocations: 0.8683 MB / 0.7135 GB, free: 1.961 MB / 0.5418 GB Notification: Performance of sorting global known variables: time 0.0006847/0.06371, allocations: 0.5568 MB / 0.714 GB, free: 1.395 MB / 0.5418 GB Notification: Performance of Backend: time 8.32e-07/0.06371, allocations: 0 / 0.714 GB, free: 1.395 MB / 0.5418 GB Notification: Performance of simCode: created initialization part: time 0.002941/0.06665, allocations: 2.45 MB / 0.7164 GB, free: 14.6 MB / 0.5574 GB Notification: Performance of SimCode: time 0.00616/0.07281, allocations: 5.311 MB / 0.7216 GB, free: 9.246 MB / 0.5574 GB Notification: Performance of Templates: time 0.04024/0.113, allocations: 32.43 MB / 0.7533 GB, free: 10.11 MB / 0.5887 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment -abortSlowSimulation -alarm=240 -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Examples.PK_Lithium.PGx_experiment.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 5.183761416003108]