Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.EnzymeKinetics.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001809/0.001809, allocations: 107.8 kB / 19.71 MB, free: 2.145 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002137/0.002137, allocations: 216.1 kB / 23 MB, free: 4.969 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.607/1.607, allocations: 230.6 MB / 256.8 MB, free: 7.816 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1339/0.1339, allocations: 23.88 MB / 337.1 MB, free: 11 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.EnzymeKinetics,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.EnzymeKinetics")
translateModel(Chemical.Obsolete.Examples.EnzymeKinetics,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.EnzymeKinetics") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.00201/0.00201, allocations: 67.88 kB / 472.4 MB, free: 7.047 MB / 334.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.2847/0.2867, allocations: 59.87 MB / 0.5198 GB, free: 9.754 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.EnzymeKinetics): time 0.07037/0.3571, allocations: 26.97 MB / 0.5461 GB, free: 12.78 MB / 398.1 MB
Notification: Performance of NFInst.instExpressions: time 0.02329/0.3804, allocations: 17.17 MB / 0.5629 GB, free: 13.16 MB / 414.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0008604/0.3812, allocations: 23.81 kB / 0.5629 GB, free: 13.14 MB / 414.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.001045/0.3823, allocations: 383.2 kB / 0.5632 GB, free: 12.86 MB / 414.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.004119/0.3864, allocations: 1.665 MB / 0.5649 GB, free: 11.45 MB / 414.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.006631/0.393, allocations: 2.544 MB / 0.5674 GB, free: 9.16 MB / 414.1 MB
Notification: Performance of NFFlatten.flatten: time 0.002549/0.3956, allocations: 1.974 MB / 0.5693 GB, free: 7.18 MB / 414.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001104/0.3967, allocations: 0.9315 MB / 0.5702 GB, free: 6.223 MB / 414.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001079/0.3978, allocations: 1.017 MB / 0.5712 GB, free: 5.203 MB / 414.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.00147/0.3992, allocations: 1.141 MB / 0.5723 GB, free: 4.059 MB / 414.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002906/0.3995, allocations: 175.9 kB / 0.5725 GB, free: 3.887 MB / 414.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.00514/0.4047, allocations: 2.098 MB / 0.5745 GB, free: 1.785 MB / 414.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.000426/0.4051, allocations: 438.7 kB / 0.5749 GB, free: 1.355 MB / 414.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.000772/0.4059, allocations: 0.7276 MB / 0.5756 GB, free: 0.625 MB / 414.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.00664/0.4125, allocations: 4.241 MB / 0.5798 GB, free: 12.37 MB / 430.1 MB
Notification: Performance of FrontEnd - DAE generated: time 3.536e-06/0.4125, allocations: 0 / 0.5798 GB, free: 12.37 MB / 430.1 MB
Notification: Performance of FrontEnd: time 1.252e-06/0.4125, allocations: 4 kB / 0.5798 GB, free: 12.36 MB / 430.1 MB
Notification: Performance of Transformations before backend: time 1.517e-05/0.4125, allocations: 0 / 0.5798 GB, free: 12.36 MB / 430.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 337
 * Number of variables: 337
Notification: Performance of Generate backend data structure: time 0.004057/0.4166, allocations: 2.151 MB / 0.5819 GB, free: 10.17 MB / 430.1 MB
Notification: Performance of prepare preOptimizeDAE: time 3.808e-05/0.4166, allocations: 8.031 kB / 0.5819 GB, free: 10.16 MB / 430.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001471/0.4181, allocations: 347.3 kB / 0.5822 GB, free: 9.824 MB / 430.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001487/0.4196, allocations: 0.7575 MB / 0.583 GB, free: 9.039 MB / 430.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001978/0.4198, allocations: 214 kB / 0.5832 GB, free: 8.805 MB / 430.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.00027/0.42, allocations: 140.3 kB / 0.5833 GB, free: 8.668 MB / 430.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003076/0.4231, allocations: 1.724 MB / 0.585 GB, free: 6.902 MB / 430.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.007e-05/0.4231, allocations: 4 kB / 0.585 GB, free: 6.898 MB / 430.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001471/0.4233, allocations: 48 kB / 0.585 GB, free: 6.852 MB / 430.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.192e-05/0.4233, allocations: 36 kB / 0.5851 GB, free: 6.816 MB / 430.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.003672/0.427, allocations: 2.169 MB / 0.5872 GB, free: 4.641 MB / 430.1 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.008885/0.4359, allocations: 4.44 MB / 0.5915 GB, free: 124 kB / 430.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.005634/0.4415, allocations: 2.696 MB / 0.5942 GB, free: 13.41 MB / 446.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001313/0.4428, allocations: 0.7309 MB / 0.5949 GB, free: 12.68 MB / 446.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.008777/0.4516, allocations: 3.786 MB / 0.5986 GB, free: 8.863 MB / 446.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.712e-05/0.4516, allocations: 43.56 kB / 0.5986 GB, free: 8.812 MB / 446.1 MB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.0005447/0.4522, allocations: 143.2 kB / 0.5988 GB, free: 8.672 MB / 446.1 MB
Notification: Performance of pre-optimization done (n=97): time 2.895e-06/0.4522, allocations: 0 / 0.5988 GB, free: 8.672 MB / 446.1 MB
Notification: Performance of matching and sorting (n=116): time 0.01706/0.4692, allocations: 4.28 MB / 0.6029 GB, free: 4.359 MB / 446.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.559e-05/0.4693, allocations: 64.41 kB / 0.603 GB, free: 4.285 MB / 446.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0009568/0.4702, allocations: 0.7153 MB / 0.6037 GB, free: 3.559 MB / 446.1 MB
Notification: Performance of collectPreVariables (initialization): time 8.152e-05/0.4703, allocations: 45.7 kB / 0.6037 GB, free: 3.508 MB / 446.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0005983/0.4709, allocations: 0.6599 MB / 0.6044 GB, free: 2.84 MB / 446.1 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0004459/0.4714, allocations: 432.4 kB / 0.6048 GB, free: 2.414 MB / 446.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004386/0.4718, allocations: 299.4 kB / 0.6051 GB, free: 2.113 MB / 446.1 MB
Notification: Performance of setup shared object (initialization): time 0.0001792/0.472, allocations: 349.9 kB / 0.6054 GB, free: 1.766 MB / 446.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0008857/0.4729, allocations: 479.8 kB / 0.6059 GB, free: 1.297 MB / 446.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001426/0.4743, allocations: 0.9879 MB / 0.6068 GB, free: 84 kB / 446.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.002671/0.477, allocations: 1.573 MB / 0.6084 GB, free: 14.27 MB / 462.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.187e-05/0.477, allocations: 8 kB / 0.6084 GB, free: 14.26 MB / 462.1 MB
Notification: Performance of matching and sorting (n=197) (initialization): time 0.005785/0.4828, allocations: 1.987 MB / 0.6103 GB, free: 12.26 MB / 462.1 MB
Notification: Performance of prepare postOptimizeDAE: time 2.546e-05/0.4828, allocations: 15.94 kB / 0.6103 GB, free: 12.25 MB / 462.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.42e-05/0.4828, allocations: 19.94 kB / 0.6104 GB, free: 12.23 MB / 462.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.002566/0.4854, allocations: 442.4 kB / 0.6108 GB, free: 11.79 MB / 462.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001267/0.4867, allocations: 367.4 kB / 0.6111 GB, free: 11.43 MB / 462.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.005668/0.4923, allocations: 3.606 MB / 0.6146 GB, free: 7.621 MB / 462.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0008587/0.4932, allocations: 55.92 kB / 0.6147 GB, free: 7.566 MB / 462.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001565/0.4933, allocations: 95.97 kB / 0.6148 GB, free: 7.473 MB / 462.1 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 75
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (190):
 * Single equations (assignments): 187
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 1
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Equation system details (not torn):
 * Constant Jacobian (size): 0 systems
 * Linear Jacobian (size,density): 1 system
   {(2,100.0%)}
 * Non-linear Jacobian (size): 0 systems
 * Without analytic Jacobian (size): 0 systems
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(1,3,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.0005257/0.4939, allocations: 309.3 kB / 0.6151 GB, free: 7.16 MB / 462.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002177/0.4941, allocations: 103.3 kB / 0.6152 GB, free: 7.059 MB / 462.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.005701/0.4998, allocations: 1.799 MB / 0.6169 GB, free: 5.242 MB / 462.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.341e-05/0.4998, allocations: 3.984 kB / 0.6169 GB, free: 5.238 MB / 462.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.67e-06/0.4998, allocations: 3.938 kB / 0.617 GB, free: 5.234 MB / 462.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0005138/0.5003, allocations: 215.1 kB / 0.6172 GB, free: 5.023 MB / 462.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001464/0.5005, allocations: 20 kB / 0.6172 GB, free: 5.004 MB / 462.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.000578/0.501, allocations: 24 kB / 0.6172 GB, free: 4.98 MB / 462.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002394/0.5013, allocations: 112.8 kB / 0.6173 GB, free: 4.871 MB / 462.1 MB
Notification: Performance of postOpt createDAEmodeBDAE (simulation): time 0.003957/0.5052, allocations: 1.441 MB / 0.6187 GB, free: 3.41 MB / 462.1 MB
Notification: Performance of postOpt symbolicJacobianDAE (simulation): time 0.003299/0.5085, allocations: 1.978 MB / 0.6206 GB, free: 1.418 MB / 462.1 MB
Notification: Performance of postOpt setEvaluationStage (simulation): time 0.00087/0.5094, allocations: 491.7 kB / 0.6211 GB, free: 0.9414 MB / 462.1 MB
Notification: Performance of sorting global known variables: time 0.0005765/0.51, allocations: 455 kB / 0.6215 GB, free: 0.4961 MB / 462.1 MB
Notification: Performance of Backend: time 1.6e-07/0.51, allocations: 0 / 0.6215 GB, free: 0.4961 MB / 462.1 MB
Notification: Performance of simCode: created initialization part: time 0.004713/0.5147, allocations: 2.248 MB / 0.6237 GB, free: 14.21 MB / 478.1 MB
Notification: Performance of SimCode: time 0.003798/0.5185, allocations: 2.698 MB / 0.6264 GB, free: 11.46 MB / 478.1 MB
Notification: Performance of Templates: time 0.05391/0.5724, allocations: 35.34 MB / 0.6609 GB, free: 8.227 MB / 0.4981 GB
"
[Timeout remaining time 659]
make -j1 -f Chemical_Chemical.Obsolete.Examples.EnzymeKinetics.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.EnzymeKinetics.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.EnzymeKinetics.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.EnzymeKinetics.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.EnzymeKinetics.sim & ./Chemical_Chemical.Obsolete.Examples.EnzymeKinetics  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.EnzymeKinetics.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 6.153218937048223]
Failed to read output from testmodel.py, exit status != 0:
0.5808981959708035 0.595400027 0.17985847800000002
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7f539fd72f50>