Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009859/0.0009859, allocations: 77.14 kB / 20.67 MB, free: 3.836 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009118/0.0009118, allocations: 165 kB / 24.06 MB, free: 456 kB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9092/0.9092, allocations: 177.1 MB / 204.5 MB, free: 5.516 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.06873/0.06873, allocations: 12.76 MB / 273.8 MB, free: 132 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium")
translateModel(Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.323e-06/1.323e-06, allocations: 0 / 348.1 MB, free: 1.895 MB / 314.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.143e-05/1.275e-05, allocations: 2.312 kB / 348.1 MB, free: 1.891 MB / 314.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium): time 0.002613/0.002626, allocations: 3.203 MB / 351.3 MB, free: 14.67 MB / 330.7 MB
Notification: Performance of NFInst.instExpressions: time 0.004098/0.006724, allocations: 3.579 MB / 354.8 MB, free: 11.07 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0002001/0.006924, allocations: 19.81 kB / 354.9 MB, free: 11.05 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0001979/0.007122, allocations: 59.38 kB / 354.9 MB, free: 11 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.A.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.A.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.A.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.B.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.B.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.B.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.C.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.C.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.C.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.001406/0.008528, allocations: 0.5553 MB / 355.5 MB, free: 10.44 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.A.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.A.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.B.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.B.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.C.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.C.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.001209/0.009737, allocations: 0.588 MB / 356.1 MB, free: 9.852 MB / 330.7 MB
Notification: Performance of NFFlatten.flatten: time 0.0005163/0.01025, allocations: 469.7 kB / 356.5 MB, free: 9.391 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001364/0.01039, allocations: 41.25 kB / 356.6 MB, free: 9.352 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0002502/0.01064, allocations: 219.4 kB / 356.8 MB, free: 9.137 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0003147/0.01095, allocations: 171.5 kB / 356.9 MB, free: 8.969 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 3.865e-05/0.01099, allocations: 20 kB / 357 MB, free: 8.949 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 7.457e-05/0.01107, allocations: 23.94 kB / 357 MB, free: 8.926 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 8.974e-05/0.01116, allocations: 91.7 kB / 357.1 MB, free: 8.836 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0001149/0.01127, allocations: 107.6 kB / 357.2 MB, free: 8.73 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.0003489/0.01162, allocations: 290.8 kB / 357.5 MB, free: 8.445 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 1.844e-06/0.01162, allocations: 4 kB / 357.5 MB, free: 8.441 MB / 330.7 MB
Notification: Performance of FrontEnd: time 5.51e-07/0.01162, allocations: 0 / 357.5 MB, free: 8.441 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 4.979e-06/0.01163, allocations: 0 / 357.5 MB, free: 8.441 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 46
 * Number of variables: 46
Notification: Performance of Generate backend data structure: time 0.000787/0.01242, allocations: 0.6707 MB / 358.1 MB, free: 7.73 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.5e-05/0.01245, allocations: 19.92 kB / 358.2 MB, free: 7.711 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001666/0.01262, allocations: 60.7 kB / 358.2 MB, free: 7.652 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0004167/0.01303, allocations: 318.9 kB / 358.5 MB, free: 7.316 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 2.004e-05/0.01305, allocations: 16.75 kB / 358.5 MB, free: 7.301 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 3.656e-05/0.01309, allocations: 20.38 kB / 358.6 MB, free: 7.281 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0002085/0.0133, allocations: 167.5 kB / 358.7 MB, free: 7.102 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.395e-05/0.01331, allocations: 3.938 kB / 358.7 MB, free: 7.098 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.987e-05/0.01333, allocations: 12 kB / 358.7 MB, free: 7.086 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 9.037e-06/0.01334, allocations: 7.938 kB / 358.8 MB, free: 7.078 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0001156/0.01346, allocations: 55.94 kB / 358.8 MB, free: 7.023 MB / 330.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001183/0.01464, allocations: 0.8367 MB / 359.6 MB, free: 6.125 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0001295/0.01477, allocations: 109.2 kB / 359.8 MB, free: 5.98 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 5.662e-05/0.01483, allocations: 55.23 kB / 359.8 MB, free: 5.914 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 1.512e-05/0.01484, allocations: 4 kB / 359.8 MB, free: 5.91 MB / 330.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.62e-05/0.01487, allocations: 41.39 kB / 359.9 MB, free: 5.859 MB / 330.7 MB
Notification: Performance of pre-optimization done (n=11): time 1.533e-06/0.01487, allocations: 0 / 359.9 MB, free: 5.859 MB / 330.7 MB
Notification: Performance of matching and sorting (n=17): time 0.002026/0.01689, allocations: 0.4998 MB / 360.4 MB, free: 5.344 MB / 330.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.000294/0.01719, allocations: 106.8 kB / 360.5 MB, free: 5.215 MB / 330.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002749/0.01746, allocations: 394.3 kB / 360.8 MB, free: 4.812 MB / 330.7 MB
Notification: Performance of collectPreVariables (initialization): time 1.782e-05/0.01748, allocations: 29.7 kB / 360.9 MB, free: 4.777 MB / 330.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0001144/0.0176, allocations: 267.1 kB / 361.1 MB, free: 4.512 MB / 330.7 MB
Notification: Performance of collectInitialBindings (initialization): time 4.111e-05/0.01764, allocations: 75.41 kB / 361.2 MB, free: 4.438 MB / 330.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 8.62e-05/0.01772, allocations: 75.61 kB / 361.3 MB, free: 4.355 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001409/0.01786, allocations: 0.5235 MB / 361.8 MB, free: 3.82 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 4.61e-05/0.01791, allocations: 32.56 kB / 361.8 MB, free: 3.789 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0001211/0.01803, allocations: 242.3 kB / 362.1 MB, free: 3.461 MB / 330.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0001989/0.01823, allocations: 311.9 kB / 362.4 MB, free: 3.066 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.884e-06/0.01823, allocations: 0 / 362.4 MB, free: 3.066 MB / 330.7 MB
Notification: Performance of matching and sorting (n=40) (initialization): time 0.000986/0.01922, allocations: 444.4 kB / 362.8 MB, free: 2.617 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 1.256e-05/0.01923, allocations: 8 kB / 362.8 MB, free: 2.609 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 5.6e-06/0.01924, allocations: 7.938 kB / 362.8 MB, free: 2.602 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.001131/0.02037, allocations: 311 kB / 363.1 MB, free: 2.289 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 7.962e-05/0.02045, allocations: 55.86 kB / 363.2 MB, free: 2.234 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.002628/0.02307, allocations: 3.995 MB / 367.2 MB, free: 14.02 MB / 346.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0001165/0.02319, allocations: 16 kB / 367.2 MB, free: 14 MB / 346.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 1.311e-05/0.0232, allocations: 12 kB / 367.2 MB, free: 13.99 MB / 346.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 22
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (30):
 * Single equations (assignments): 28
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(3,3,77.8%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(3,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.0001017/0.02331, allocations: 184.4 kB / 367.4 MB, free: 13.8 MB / 346.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 5.33e-05/0.02336, allocations: 43.84 kB / 367.4 MB, free: 13.76 MB / 346.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 4.228e-05/0.0234, allocations: 51.05 kB / 367.5 MB, free: 13.71 MB / 346.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 2.605e-06/0.0234, allocations: 0 / 367.5 MB, free: 13.71 MB / 346.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.542e-06/0.02341, allocations: 0 / 367.5 MB, free: 13.71 MB / 346.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 6.135e-05/0.02347, allocations: 51.73 kB / 367.5 MB, free: 13.66 MB / 346.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 2.366e-05/0.02349, allocations: 8 kB / 367.5 MB, free: 13.65 MB / 346.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 9.716e-05/0.02359, allocations: 0 / 367.5 MB, free: 13.65 MB / 346.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 4.094e-05/0.02363, allocations: 27.89 kB / 367.6 MB, free: 13.62 MB / 346.7 MB
Notification: Performance of postOpt createDAEmodeBDAE (simulation): time 0.0006531/0.02428, allocations: 0.5724 MB / 368.1 MB, free: 13.04 MB / 346.7 MB
Notification: Performance of postOpt symbolicJacobianDAE (simulation): time 0.0002843/0.02457, allocations: 0.6755 MB / 368.8 MB, free: 12.34 MB / 346.7 MB
Notification: Performance of postOpt setEvaluationStage (simulation): time 4.618e-05/0.02461, allocations: 39.66 kB / 368.8 MB, free: 12.3 MB / 346.7 MB
Notification: Performance of sorting global known variables: time 0.0001053/0.02472, allocations: 251 kB / 369.1 MB, free: 12.05 MB / 346.7 MB
Notification: Performance of Backend: time 3.5e-07/0.02472, allocations: 0 / 369.1 MB, free: 12.05 MB / 346.7 MB
Notification: Performance of simCode: created initialization part: time 0.0008862/0.0256, allocations: 0.6016 MB / 369.7 MB, free: 11.41 MB / 346.7 MB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Error: Error parsing unit %: Parse error
Notification: Performance of SimCode: time 0.001363/0.02697, allocations: 1.522 MB / 371.2 MB, free: 9.82 MB / 346.7 MB
Notification: Performance of Templates: time 0.00741/0.03438, allocations: 7.15 MB / 378.4 MB, free: 2.754 MB / 346.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.pipe ; mkfifo Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.pipe ; head -c 1048576 < Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.pipe >> ../files/Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.sim & ./Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.SteadyStates.Examples.SimpleReaction2_in_Equilibrium.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 2.669762559235096]