Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001326/0.001326, allocations: 77.86 kB / 20.67 MB, free: 3.832 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001488/0.001488, allocations: 169 kB / 24.06 MB, free: 448 kB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9004/0.9004, allocations: 177.1 MB / 204.5 MB, free: 5.52 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.06771/0.06771, allocations: 12.76 MB / 273.8 MB, free: 140 kB / 250.7 MB " [Timeout remaining time 180] Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation") translateModel(Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.402e-06/1.402e-06, allocations: 0 / 348.1 MB, free: 2.016 MB / 314.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 2.235e-05/2.375e-05, allocations: 4.703 kB / 348.1 MB, free: 2.012 MB / 314.7 MB Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation): time 0.01195/0.01197, allocations: 11.99 MB / 360.1 MB, free: 5.977 MB / 330.7 MB Notification: Performance of NFInst.instExpressions: time 0.01717/0.02914, allocations: 16.18 MB / 376.3 MB, free: 5.734 MB / 346.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.00118/0.03032, allocations: 122.8 kB / 376.4 MB, free: 5.613 MB / 346.7 MB Notification: Performance of NFTyping.typeComponents: time 0.000652/0.03098, allocations: 499.4 kB / 376.9 MB, free: 5.121 MB / 346.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.oxygen_unbound.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.CO2_liquid.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.CO2_liquid.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.CO2_liquid.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.OxyHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.OxyHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.OxyHm.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.DeoxyHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.DeoxyHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.DeoxyHm.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.A.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.A.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.A.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.HA.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.HA.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.HA.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH2.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH3.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NHCOO.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NHCOO.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NHCOO.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.OxyHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.OxyHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.OxyHm.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.DeoxyHm.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.DeoxyHm.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.DeoxyHm.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.A.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.A.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.A.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.HA.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.HA.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.HA.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH2.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH3.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NHCOO.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NHCOO.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NHCOO.Utilities.UnitConversions.findUnit'. Notification: Performance of NFTyping.typeBindings: time 0.004343/0.03532, allocations: 2.934 MB / 379.8 MB, free: 2.18 MB / 346.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.CO2_liquid.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.CO2_liquid.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.OxyHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.OxyHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.DeoxyHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.DeoxyHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.A.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.A.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.HA.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.HA.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NH3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NHCOO.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.R.NHCOO.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.OxyHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.OxyHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.DeoxyHm.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.DeoxyHm.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.A.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.A.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.HA.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.HA.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NH3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NHCOO.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.hemoglobin.T.NHCOO.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. Notification: Performance of NFTyping.typeClassSections: time 0.004838/0.04016, allocations: 3.144 MB / 382.9 MB, free: 15.03 MB / 362.7 MB Notification: Performance of NFFlatten.flatten: time 0.009162/0.04932, allocations: 12.55 MB / 395.5 MB, free: 2.426 MB / 362.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.002202/0.05152, allocations: 1.902 MB / 397.4 MB, free: 460 kB / 362.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.005539/0.05706, allocations: 6.168 MB / 403.6 MB, free: 10.27 MB / 378.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.01162/0.06868, allocations: 5.394 MB / 409 MB, free: 4.863 MB / 378.7 MB Notification: Performance of NFPackage.collectConstants: time 0.001236/0.06992, allocations: 0.9961 MB / 409.9 MB, free: 3.867 MB / 378.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.008411/0.07833, allocations: 1.086 MB / 411 MB, free: 2.781 MB / 378.7 MB Notification: Performance of NFScalarize.scalarize: time 0.001994/0.08032, allocations: 2.648 MB / 413.7 MB, free: 128 kB / 378.7 MB Notification: Performance of NFVerifyModel.verify: time 0.009324/0.08964, allocations: 3.399 MB / 417.1 MB, free: 12.72 MB / 394.7 MB Notification: Performance of NFConvertDAE.convert: time 0.02629/0.1159, allocations: 9.932 MB / 427 MB, free: 2.758 MB / 394.7 MB Notification: Performance of FrontEnd - DAE generated: time 4.679e-06/0.1159, allocations: 0 / 427 MB, free: 2.758 MB / 394.7 MB Notification: Performance of FrontEnd: time 8.61e-07/0.1159, allocations: 0 / 427 MB, free: 2.758 MB / 394.7 MB Notification: Performance of Transformations before backend: time 0.0001266/0.1161, allocations: 4 kB / 427 MB, free: 2.754 MB / 394.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 1218 * Number of variables: 1218 Notification: Performance of Generate backend data structure: time 0.01849/0.1346, allocations: 10.46 MB / 437.5 MB, free: 8.188 MB / 410.7 MB Notification: Performance of prepare preOptimizeDAE: time 3.581e-05/0.1346, allocations: 15.92 kB / 437.5 MB, free: 8.172 MB / 410.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002367/0.137, allocations: 1.542 MB / 439 MB, free: 6.625 MB / 410.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.1887/0.3257, allocations: 7.463 MB / 446.5 MB, free: 119.8 MB / 410.8 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002763/0.3259, allocations: 400.3 kB / 446.9 MB, free: 119.8 MB / 410.8 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0008649/0.3268, allocations: 0.5108 MB / 447.4 MB, free: 119.8 MB / 410.8 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.006233/0.333, allocations: 3.659 MB / 451.1 MB, free: 119.2 MB / 410.8 MB Notification: Performance of preOpt findStateOrder (simulation): time 8.815e-05/0.3331, allocations: 8.75 kB / 451.1 MB, free: 119.2 MB / 410.8 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0004522/0.3336, allocations: 194 kB / 451.3 MB, free: 119.1 MB / 410.8 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 7.802e-05/0.3337, allocations: 115 kB / 451.4 MB, free: 119.1 MB / 410.8 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002427/0.3361, allocations: 1.629 MB / 453 MB, free: 118.9 MB / 410.8 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0215/0.3576, allocations: 20.88 MB / 473.9 MB, free: 108.6 MB / 410.8 MB Notification: Performance of preOpt comSubExp (simulation): time 0.001921/0.3595, allocations: 2.191 MB / 476.1 MB, free: 107.3 MB / 410.8 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.001098/0.3606, allocations: 0.9563 MB / 477 MB, free: 106.9 MB / 410.8 MB Notification: Performance of preOpt evalFunc (simulation): time 0.0001499/0.3608, allocations: 73.91 kB / 477.1 MB, free: 106.9 MB / 410.8 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.504e-05/0.3608, allocations: 114.4 kB / 477.2 MB, free: 106.8 MB / 410.8 MB Notification: Performance of pre-optimization done (n=374): time 5.25e-06/0.3608, allocations: 3.062 kB / 477.2 MB, free: 106.8 MB / 410.8 MB Notification: Performance of matching and sorting (n=562): time 0.05803/0.4188, allocations: 17.07 MB / 494.3 MB, free: 102.2 MB / 410.8 MB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001055/0.4189, allocations: 0.7298 MB / 495 MB, free: 101.3 MB / 410.8 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.006003/0.4249, allocations: 6.941 MB / 0.4902 GB, free: 96.31 MB / 410.8 MB Notification: Performance of collectPreVariables (initialization): time 0.0007333/0.4257, allocations: 137.7 kB / 0.4903 GB, free: 96.17 MB / 410.8 MB Notification: Performance of collectInitialEqns (initialization): time 0.001873/0.4276, allocations: 4.174 MB / 0.4944 GB, free: 92.24 MB / 410.8 MB Notification: Performance of collectInitialBindings (initialization): time 0.001371/0.4289, allocations: 2.133 MB / 0.4965 GB, free: 90.34 MB / 410.8 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.001905/0.4308, allocations: 1.623 MB / 0.4981 GB, free: 88.71 MB / 410.8 MB Notification: Performance of setup shared object (initialization): time 3.544e-05/0.4309, allocations: 480.8 kB / 0.4985 GB, free: 88.24 MB / 410.8 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.001638/0.4325, allocations: 0.9183 MB / 0.4994 GB, free: 87.32 MB / 410.8 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.002429/0.4349, allocations: 4.379 MB / 0.5037 GB, free: 81.57 MB / 410.8 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.004545/0.4395, allocations: 6.062 MB / 0.5096 GB, free: 74.09 MB / 410.8 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.485e-05/0.4395, allocations: 23.94 kB / 0.5096 GB, free: 74.07 MB / 410.8 MB Notification: Performance of matching and sorting (n=958) (initialization): time 0.03587/0.4754, allocations: 11.95 MB / 0.5213 GB, free: 62.02 MB / 410.8 MB Notification: Performance of prepare postOptimizeDAE: time 4.912e-05/0.4754, allocations: 37.25 kB / 0.5213 GB, free: 61.99 MB / 410.8 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 7.354e-05/0.4755, allocations: 72 kB / 0.5214 GB, free: 61.92 MB / 410.8 MB Notification: Tearing is skipped for linear strong component 2: solving it torn to 24 iteration variables is estimated at 34904 flops against 15120 for the untorn system of size 140. Notification: Performance of postOpt tearingSystem (initialization): time 0.0478/0.5233, allocations: 20.43 MB / 0.5414 GB, free: 41.47 MB / 410.8 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002888/0.5262, allocations: 1.303 MB / 0.5426 GB, free: 40.17 MB / 410.8 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.0207/0.5469, allocations: 13.29 MB / 0.5556 GB, free: 26.83 MB / 410.8 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.004637/0.5515, allocations: 354 kB / 0.5559 GB, free: 26.5 MB / 410.8 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0004567/0.552, allocations: 256 kB / 0.5562 GB, free: 26.25 MB / 410.8 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 328 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (680): * Single equations (assignments): 678 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 1 * Torn equation systems: 1 * Mixed (continuous/discrete) equation systems: 0 Notification: Equation system details (not torn): * Constant Jacobian (size): 0 systems * Linear Jacobian (size,density): 1 system {(140,1.8%)} * Non-linear Jacobian (size): 0 systems * Without analytic Jacobian (size): 0 systems Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(34,106)} Notification: Performance of prepare postOptimizeDAE: time 0.001827/0.5538, allocations: 0.6019 MB / 0.5568 GB, free: 25.65 MB / 410.8 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.001341/0.5552, allocations: 0.977 MB / 0.5577 GB, free: 24.67 MB / 410.8 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.001137/0.5563, allocations: 1.194 MB / 0.5589 GB, free: 23.46 MB / 410.8 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 2.572e-05/0.5563, allocations: 39.83 kB / 0.5589 GB, free: 23.43 MB / 410.8 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 8.636e-06/0.5563, allocations: 4 kB / 0.5589 GB, free: 23.42 MB / 410.8 MB Notification: Performance of postOpt removeConstants (simulation): time 0.002129/0.5585, allocations: 1.957 MB / 0.5609 GB, free: 21.45 MB / 410.8 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0007029/0.5592, allocations: 116 kB / 0.561 GB, free: 21.34 MB / 410.8 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.002719/0.5619, allocations: 183.7 kB / 0.5611 GB, free: 21.16 MB / 410.8 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.001313/0.5632, allocations: 0.6315 MB / 0.5618 GB, free: 20.52 MB / 410.8 MB Notification: Performance of postOpt createDAEmodeBDAE (simulation): time 0.01474/0.5779, allocations: 8.621 MB / 0.5702 GB, free: 11.77 MB / 410.8 MB Notification: Performance of postOpt symbolicJacobianDAE (simulation): time 0.007298/0.5852, allocations: 7.962 MB / 0.578 GB, free: 3.641 MB / 410.8 MB Notification: Performance of postOpt setEvaluationStage (simulation): time 0.001432/0.5867, allocations: 1.018 MB / 0.5789 GB, free: 2.578 MB / 410.8 MB Notification: Performance of sorting global known variables: time 0.003022/0.5897, allocations: 3.283 MB / 0.5821 GB, free: 15.31 MB / 426.8 MB Notification: Performance of Backend: time 6.61e-07/0.5897, allocations: 0 / 0.5821 GB, free: 15.31 MB / 426.8 MB Notification: Performance of simCode: created initialization part: time 0.01282/0.6025, allocations: 5.963 MB / 0.588 GB, free: 9.297 MB / 426.8 MB Error: Error parsing unit kcal/min: Unit not found Error: Error parsing unit kcal: Unit not found Error: Error parsing unit %: Parse error Error: Error parsing unit kcal/mol: Unit not found Notification: Performance of SimCode: time 0.1224/0.7249, allocations: 18.53 MB / 0.6061 GB, free: 109.7 MB / 426.8 MB Notification: Performance of Templates: time 0.2903/1.015, allocations: 207 MB / 0.8082 GB, free: 111.8 MB / 442.8 MB " [Timeout remaining time 659] make -j1 -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.makefile [Timeout 660] (rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.sim & ./Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation -abortSlowSimulation -alarm=240 -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_oxygenation.pipe 2>&1) [Timeout 240] [Calling os._exit(0), Time elapsed: 6.223824680782855]