Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Physiolibrary_Physiolibrary.Fluid.Examples.Kofranek2014.NonPulsatileCirculation.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo): time 0.1257/0.1257, allocations: 15.56 MB / 35.22 MB, free: 4.484 MB / 26.18 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001407/0.001407, allocations: 107.6 kB / 42.81 MB, free: 6.156 MB / 34.91 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001762/0.001762, allocations: 223.9 kB / 50.51 MB, free: 9.996 MB / 34.91 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.745/1.745, allocations: 230.6 MB / 288.7 MB, free: 6.336 MB / 206.1 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo): time 0.1719/0.1719, allocations: 23.73 MB / 373.3 MB, free: 2.895 MB / 286.1 MB " [Timeout remaining time 180] Using package Physiolibrary with version 3.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Using package Chemical with version 1.4.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo) Running command: translateModel(Physiolibrary.Fluid.Examples.Kofranek2014.NonPulsatileCirculation,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.Kofranek2014.NonPulsatileCirculation") translateModel(Physiolibrary.Fluid.Examples.Kofranek2014.NonPulsatileCirculation,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.Kofranek2014.NonPulsatileCirculation") [Timeout 660] "Notification: Performance of FrontEnd - Absyn->SCode: time 3.732e-05/3.732e-05, allocations: 2.281 kB / 0.506 GB, free: 14.55 MB / 366.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Fluid.Examples.Kofranek2014.NonPulsatileCirculation): time 0.432/0.432, allocations: 66.37 MB / 0.5709 GB, free: 2.789 MB / 382.1 MB Notification: Performance of NFInst.instExpressions: time 0.03747/0.4695, allocations: 23.91 MB / 0.5942 GB, free: 11.27 MB / 414.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.003426/0.4729, allocations: 47.62 kB / 0.5943 GB, free: 11.22 MB / 414.1 MB Notification: Performance of NFTyping.typeComponents: time 0.00206/0.4749, allocations: 397 kB / 0.5946 GB, free: 10.83 MB / 414.1 MB Notification: Performance of NFTyping.typeBindings: time 0.0139/0.4888, allocations: 2.889 MB / 0.5975 GB, free: 7.93 MB / 414.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.01192/0.5008, allocations: 2.941 MB / 0.6003 GB, free: 4.973 MB / 414.1 MB Notification: Performance of NFFlatten.flatten: time 0.005382/0.5061, allocations: 2.801 MB / 0.6031 GB, free: 2.16 MB / 414.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001623/0.5078, allocations: 0.6144 MB / 0.6037 GB, free: 1.535 MB / 414.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.004873/0.5126, allocations: 1.599 MB / 0.6052 GB, free: 15.93 MB / 430.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.002163/0.5148, allocations: 0.8638 MB / 0.6061 GB, free: 15.06 MB / 430.1 MB Notification: Performance of NFPackage.collectConstants: time 0.0002591/0.5151, allocations: 80 kB / 0.6061 GB, free: 14.98 MB / 430.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.008234/0.5233, allocations: 2.031 MB / 0.6081 GB, free: 12.95 MB / 430.1 MB Notification: Performance of combineBinaries: time 0.003606/0.5269, allocations: 2.347 MB / 0.6104 GB, free: 10.58 MB / 430.1 MB Notification: Performance of replaceArrayConstructors: time 0.00151/0.5284, allocations: 1.378 MB / 0.6118 GB, free: 9.188 MB / 430.1 MB Notification: Performance of NFVerifyModel.verify: time 0.0004443/0.5289, allocations: 120 kB / 0.6119 GB, free: 9.07 MB / 430.1 MB Notification: Performance of FrontEnd: time 0.000444/0.5293, allocations: 71.7 kB / 0.612 GB, free: 9 MB / 430.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 177 (167) * Number of variables: 177 (162) Notification: Performance of [SIM] Bindings: time 0.00709/0.5364, allocations: 5.003 MB / 0.6168 GB, free: 3.797 MB / 430.1 MB Notification: Performance of [SIM] FunctionAlias: time 0.001257/0.5377, allocations: 0.6287 MB / 0.6175 GB, free: 3.148 MB / 430.1 MB Notification: Performance of [SIM] Early Inline: time 0.003886/0.5415, allocations: 2.515 MB / 0.6199 GB, free: 0.5938 MB / 430.1 MB Notification: Performance of [SIM] Simplify 1: time 0.001021/0.5426, allocations: 470.5 kB / 0.6204 GB, free: 72 kB / 430.1 MB Notification: Performance of [SIM] Alias: time 0.00572/0.5483, allocations: 3.306 MB / 0.6236 GB, free: 12.28 MB / 446.1 MB Notification: Performance of [SIM] Simplify 2: time 0.0007437/0.549, allocations: 407.6 kB / 0.624 GB, free: 11.83 MB / 446.1 MB Notification: Performance of [SIM] Remove Stream: time 0.0002776/0.5493, allocations: 208.1 kB / 0.6242 GB, free: 11.6 MB / 446.1 MB Notification: Performance of [SIM] Detect States: time 0.0008059/0.5501, allocations: 0.5294 MB / 0.6247 GB, free: 11.02 MB / 446.1 MB Notification: Performance of [SIM] Events: time 0.0002825/0.5504, allocations: 139.7 kB / 0.6248 GB, free: 10.88 MB / 446.1 MB Notification: Performance of [SIM] Partitioning: time 0.001181/0.5516, allocations: 0.8515 MB / 0.6257 GB, free: 9.961 MB / 446.1 MB Notification: Performance of [SIM] Causalize: time 0.003179/0.5547, allocations: 1.896 MB / 0.6275 GB, free: 7.996 MB / 446.1 MB Notification: Performance of [SIM] After Index Reduction Inline: time 0.001974/0.5567, allocations: 1.561 MB / 0.629 GB, free: 6.434 MB / 446.1 MB Notification: Performance of [INI] Simplify: time 0.003253/0.56, allocations: 1.459 MB / 0.6305 GB, free: 4.863 MB / 446.1 MB Notification: Performance of [INI] Inline: time 0.003616/0.5636, allocations: 2.946 MB / 0.6333 GB, free: 1.906 MB / 446.1 MB Notification: Performance of [INI] Partitioning: time 0.0001751/0.5638, allocations: 60.06 kB / 0.6334 GB, free: 1.832 MB / 446.1 MB Notification: Performance of [INI] Cleanup: time 0.000529/0.5643, allocations: 419.6 kB / 0.6338 GB, free: 1.422 MB / 446.1 MB Warning: NBResolveSingularities.balanceInitialization reports an overdetermined initialization! Checking for consistency is not yet supported, following equations had to be removed: [SCAL] (1) SystemicArteries.tm_start = SystemicArteries.volume_start * 1000.0 ($RES_BND_253); [SCAL] (1) SystemicVeins.tm_start = SystemicVeins.volume_start * 1000.0 ($RES_BND_245); [SCAL] (1) PulmonaryVeins.tm_start = PulmonaryVeins.volume_start * 1000.0 ($RES_BND_238); [SCAL] (1) PulmonaryArteries.tm_start = PulmonaryArteries.volume_start * 1000.0 ($RES_BND_230); Notification: Performance of [INI] Causalize: time 0.008995/0.5733, allocations: 5.054 MB / 0.6387 GB, free: 12.26 MB / 462.1 MB Notification: Performance of [INI] Tearing: time 0.0002557/0.5735, allocations: 164.2 kB / 0.6389 GB, free: 12.1 MB / 462.1 MB Notification: Performance of [SIM] Initialization: time 1.703e-06/0.5735, allocations: 0.5625 kB / 0.6389 GB, free: 12.1 MB / 462.1 MB Notification: Performance of [SIM] DAE-Mode: time 0.001359/0.5749, allocations: 0.7129 MB / 0.6396 GB, free: 11.35 MB / 462.1 MB Notification: Performance of [SIM] Remove Dummies: time 1.961e-05/0.5749, allocations: 4.938 kB / 0.6396 GB, free: 11.34 MB / 462.1 MB Notification: Performance of [SIM] Tearing: time 9.15e-05/0.575, allocations: 108 kB / 0.6397 GB, free: 11.24 MB / 462.1 MB Notification: Performance of [SIM] Categorize: time 4.913e-05/0.5751, allocations: 15.92 kB / 0.6397 GB, free: 11.22 MB / 462.1 MB Notification: Performance of [SIM] Solve: time 0.005824/0.5809, allocations: 3.236 MB / 0.6429 GB, free: 8.035 MB / 462.1 MB Error: Internal error NBJacobian.SparsityColoring.PartialD2ColoringAlgC.getIndices failed because cref SystemicVeins.q_in[1].m_flow is neither a seed nor a partial candidate! " [Timeout remaining time 659] [Calling sys.exit(0), Time elapsed: 3.686143914004788] Failed to read output from testmodel.py, exit status != 0: 0.593066542991437 0.608043216 0.07468354 Calling exit ...