Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001486/0.001486, allocations: 104.3 kB / 19.76 MB, free: 1.898 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001613/0.001613, allocations: 217.5 kB / 23.07 MB, free: 4.992 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.314/1.314, allocations: 230.7 MB / 256.9 MB, free: 7.754 MB / 206.1 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1219/0.1219, allocations: 23.89 MB / 337.2 MB, free: 10.91 MB / 270.1 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery") translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery") [Timeout 660] "Notification: Performance of FrontEnd - Absyn->SCode: time 1.952e-05/1.952e-05, allocations: 2.281 kB / 472.5 MB, free: 6.973 MB / 334.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery): time 0.08721/0.08723, allocations: 40.06 MB / 0.5005 GB, free: 15 MB / 382.1 MB Notification: Performance of NFInst.instExpressions: time 0.2468/0.3341, allocations: 64.1 MB / 0.5631 GB, free: 8.879 MB / 382.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.003508/0.3376, allocations: 83.09 kB / 0.5632 GB, free: 8.836 MB / 382.1 MB Notification: Performance of NFTyping.typeComponents: time 0.004051/0.3416, allocations: 1.476 MB / 0.5646 GB, free: 7.707 MB / 382.1 MB Notification: Performance of NFTyping.typeBindings: time 0.01589/0.3575, allocations: 5.986 MB / 0.5705 GB, free: 3.145 MB / 382.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.02556/0.3831, allocations: 10.4 MB / 0.5806 GB, free: 11.09 MB / 398.1 MB Notification: Performance of NFFlatten.flatten: time 0.03017/0.4132, allocations: 30.2 MB / 0.6101 GB, free: 13.2 MB / 430.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.01755/0.4308, allocations: 12.58 MB / 0.6224 GB, free: 0.5391 MB / 430.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.01566/0.4464, allocations: 10.55 MB / 0.6327 GB, free: 5.969 MB / 446.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.01784/0.4643, allocations: 10.9 MB / 0.6434 GB, free: 11.08 MB / 462.1 MB Notification: Performance of NFPackage.collectConstants: time 0.006309/0.4706, allocations: 1.949 MB / 0.6453 GB, free: 9.133 MB / 462.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.02768/0.4983, allocations: 9.144 MB / 0.6542 GB, free: 15.97 MB / 478.1 MB Notification: Performance of combineBinaries: time 0.02995/0.5282, allocations: 22.15 MB / 0.6758 GB, free: 9.711 MB / 494.1 MB Notification: Performance of replaceArrayConstructors: time 0.01082/0.5391, allocations: 9.841 MB / 0.6854 GB, free: 15.8 MB / 0.4981 GB Notification: Performance of NFVerifyModel.verify: time 0.00374/0.5428, allocations: 0.6484 MB / 0.6861 GB, free: 15.15 MB / 0.4981 GB Notification: Performance of FrontEnd: time 0.000946/0.5437, allocations: 243.5 kB / 0.6863 GB, free: 14.91 MB / 0.4981 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 3808 (1968) * Number of variables: 3808 (1240) Notification: Performance of [SIM] Bindings: time 0.3105/0.8542, allocations: 68.7 MB / 0.7534 GB, free: 71.99 MB / 0.5137 GB Notification: Performance of [SIM] FunctionAlias: time 0.01687/0.8711, allocations: 11.23 MB / 0.7644 GB, free: 67 MB / 0.5137 GB Notification: Performance of [SIM] Early Inline: time 0.08376/0.9549, allocations: 70.5 MB / 0.8332 GB, free: 26.16 MB / 0.5137 GB Notification: Performance of [SIM] Simplify 1: time 0.02016/0.975, allocations: 8.818 MB / 0.8418 GB, free: 18.92 MB / 0.5137 GB Warning: NBAlias.setStartFixed: Alias set with conflicting unfixed start values detected. Use -d=dumprepl for more information. Notification: Performance of [SIM] Alias: time 0.06408/1.039, allocations: 36.16 MB / 0.8771 GB, free: 15.09 MB / 0.545 GB Notification: Performance of [SIM] Simplify 2: time 0.02024/1.059, allocations: 8.746 MB / 0.8857 GB, free: 6.371 MB / 0.545 GB Notification: Performance of [SIM] Remove Stream: time 0.01674/1.076, allocations: 8.069 MB / 0.8935 GB, free: 15.13 MB / 0.5606 GB Notification: Performance of [SIM] Detect States: time 0.0193/1.095, allocations: 11.66 MB / 0.9049 GB, free: 3.785 MB / 0.5606 GB Notification: Performance of [SIM] Events: time 0.007053/1.102, allocations: 3.282 MB / 0.9081 GB, free: 0.6484 MB / 0.5606 GB Notification: Performance of [SIM] Partitioning: time 0.2778/1.38, allocations: 21.97 MB / 0.9296 GB, free: 118.6 MB / 0.5762 GB Error: Internal error NBResolveSingularities.indexReduction failed because slicing during index reduction is not yet supported. needed sliced dummy: [STAT] (4) flow Real[4] tensed.HmNHCOO.solution.dV slice: {0} " [Timeout remaining time 658] [Calling sys.exit(0), Time elapsed: 4.164845607010648] Failed to read output from testmodel.py, exit status != 0: 1.9350168570526876 1.944334592 1.39774187 Calling exit ...