Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.CheckSubstancesData.StandardElectrochemicalCell.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.00147/0.00147, allocations: 104.3 kB / 19.77 MB, free: 2.051 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001597/0.001597, allocations: 212.6 kB / 23.06 MB, free: 4.848 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.285/1.285, allocations: 230.7 MB / 256.9 MB, free: 7.738 MB / 206.1 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1204/0.1204, allocations: 23.88 MB / 337.2 MB, free: 10.93 MB / 270.1 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Obsolete.Examples.CheckSubstancesData.StandardElectrochemicalCell,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.CheckSubstancesData.StandardElectrochemicalCell") translateModel(Chemical.Obsolete.Examples.CheckSubstancesData.StandardElectrochemicalCell,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.CheckSubstancesData.StandardElectrochemicalCell") [Timeout 660] "Notification: Performance of FrontEnd - Absyn->SCode: time 1.537e-05/1.537e-05, allocations: 2.281 kB / 472.4 MB, free: 7 MB / 334.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.CheckSubstancesData.StandardElectrochemicalCell): time 0.07029/0.07031, allocations: 27.68 MB / 0.4884 GB, free: 11.45 MB / 366.1 MB Notification: Performance of NFInst.instExpressions: time 0.02325/0.09356, allocations: 19.03 MB / 0.507 GB, free: 8.348 MB / 382.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0009332/0.09449, allocations: 27.75 kB / 0.507 GB, free: 8.32 MB / 382.1 MB Notification: Performance of NFTyping.typeComponents: time 0.00126/0.09575, allocations: 496.3 kB / 0.5075 GB, free: 7.832 MB / 382.1 MB Notification: Performance of NFTyping.typeBindings: time 0.002446/0.09819, allocations: 0.9581 MB / 0.5084 GB, free: 6.867 MB / 382.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.008199/0.1064, allocations: 3.343 MB / 0.5117 GB, free: 3.504 MB / 382.1 MB Notification: Performance of NFFlatten.flatten: time 0.002555/0.1089, allocations: 2.04 MB / 0.5137 GB, free: 1.457 MB / 382.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0009271/0.1099, allocations: 0.7359 MB / 0.5144 GB, free: 0.7031 MB / 382.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.1655/0.2754, allocations: 0.8777 MB / 0.5153 GB, free: 31.02 MB / 382.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.001369/0.2768, allocations: 0.8068 MB / 0.516 GB, free: 31.02 MB / 382.1 MB Notification: Performance of NFPackage.collectConstants: time 0.0002975/0.2771, allocations: 144.4 kB / 0.5162 GB, free: 31.02 MB / 382.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.004515/0.2816, allocations: 1.994 MB / 0.5181 GB, free: 31.02 MB / 382.1 MB Notification: Performance of combineBinaries: time 0.001754/0.2834, allocations: 3.007 MB / 0.5211 GB, free: 29.8 MB / 382.1 MB Notification: Performance of replaceArrayConstructors: time 0.0007541/0.2841, allocations: 1.824 MB / 0.5228 GB, free: 28.69 MB / 382.1 MB Notification: Performance of NFVerifyModel.verify: time 0.0002418/0.2844, allocations: 149.8 kB / 0.523 GB, free: 28.69 MB / 382.1 MB Notification: Performance of FrontEnd: time 0.0002045/0.2846, allocations: 76.88 kB / 0.5231 GB, free: 28.68 MB / 382.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 323 (317) * Number of variables: 323 (314) Notification: Performance of [SIM] Bindings: time 0.005275/0.2898, allocations: 7.655 MB / 0.5305 GB, free: 25.41 MB / 382.1 MB Notification: Performance of [SIM] FunctionAlias: time 0.001058/0.2909, allocations: 1.11 MB / 0.5316 GB, free: 25.29 MB / 382.1 MB Notification: Performance of [SIM] Early Inline: time 0.007568/0.2985, allocations: 8.164 MB / 0.5396 GB, free: 22.43 MB / 382.1 MB Notification: Performance of [SIM] Simplify 1: time 0.001315/0.2998, allocations: 1.122 MB / 0.5407 GB, free: 22.08 MB / 382.1 MB Notification: Performance of [SIM] Alias: time 0.006464/0.3062, allocations: 7.019 MB / 0.5475 GB, free: 18.68 MB / 382.1 MB Notification: Performance of [SIM] Simplify 2: time 0.0007908/0.307, allocations: 0.8243 MB / 0.5484 GB, free: 18.41 MB / 382.1 MB Notification: Performance of [SIM] Remove Stream: time 0.0001816/0.3072, allocations: 256.1 kB / 0.5486 GB, free: 18.27 MB / 382.1 MB Notification: Performance of [SIM] Detect States: time 0.0004228/0.3076, allocations: 0.6127 MB / 0.5492 GB, free: 17.91 MB / 382.1 MB Notification: Performance of [SIM] Events: time 0.0001907/0.3078, allocations: 188.5 kB / 0.5494 GB, free: 17.83 MB / 382.1 MB Notification: Performance of [SIM] Partitioning: time 0.0008595/0.3087, allocations: 1.397 MB / 0.5507 GB, free: 16.98 MB / 382.1 MB Notification: Performance of [SIM] Causalize: time 0.001542/0.3102, allocations: 1.817 MB / 0.5525 GB, free: 16.14 MB / 382.1 MB Notification: Performance of [SIM] After Index Reduction Inline: time 0.001055/0.3113, allocations: 1.932 MB / 0.5544 GB, free: 14.94 MB / 382.1 MB Notification: Performance of [INI] Simplify: time 0.001707/0.313, allocations: 1.708 MB / 0.5561 GB, free: 13.57 MB / 382.1 MB Notification: Performance of [INI] Inline: time 0.00198/0.315, allocations: 3.651 MB / 0.5596 GB, free: 9.969 MB / 382.1 MB Notification: Performance of [INI] Partitioning: time 8.682e-05/0.3151, allocations: 60.05 kB / 0.5597 GB, free: 9.895 MB / 382.1 MB Notification: Performance of [INI] Cleanup: time 0.0002933/0.3153, allocations: 0.5632 MB / 0.5602 GB, free: 9.355 MB / 382.1 MB Notification: Performance of [INI] Causalize: time 0.002291/0.3176, allocations: 2.543 MB / 0.5627 GB, free: 6.773 MB / 382.1 MB Notification: Performance of [INI] Tearing: time 6.922e-05/0.3177, allocations: 110.7 kB / 0.5628 GB, free: 6.668 MB / 382.1 MB Notification: Performance of [SIM] Initialization: time 9.62e-07/0.3177, allocations: 0 / 0.5628 GB, free: 6.668 MB / 382.1 MB Notification: Performance of [SIM] DAE-Mode: time 0.001231/0.3189, allocations: 1.636 MB / 0.5644 GB, free: 5.098 MB / 382.1 MB Notification: Performance of [SIM] Remove Dummies: time 9.588e-06/0.3189, allocations: 8.031 kB / 0.5644 GB, free: 5.094 MB / 382.1 MB Notification: Performance of [SIM] Tearing: time 5.62e-05/0.319, allocations: 138.3 kB / 0.5646 GB, free: 4.969 MB / 382.1 MB Notification: Performance of [SIM] Categorize: time 2.768e-05/0.319, allocations: 16.22 kB / 0.5646 GB, free: 4.965 MB / 382.1 MB Notification: Performance of [SIM] Solve: time 0.00462/0.3237, allocations: 5.534 MB / 0.57 GB, free: 15.94 MB / 398.1 MB Error: Internal error NBJacobian.SparsityColoring.PartialD2ColoringAlgC.getIndices failed because cref electrodeReaction.rr is neither a seed nor a partial candidate! " [Timeout remaining time 660] [Calling sys.exit(0), Time elapsed: 2.516997517028358] Failed to read output from testmodel.py, exit status != 0: 0.3317837330396287 0.34407549400000004 0.056790886000000006 Calling exit ...