Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001474/0.001474, allocations: 93.17 kB / 19.42 MB, free: 484 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001183/0.001183, allocations: 172.9 kB / 22.72 MB, free: 1.816 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.959/0.959, allocations: 177.1 MB / 203.1 MB, free: 5.301 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.679/1.679, allocations: 273.5 MB / 0.5205 GB, free: 14.77 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=864000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites") translateModel(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=864000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.454e-06/2.454e-06, allocations: 1.156 kB / 0.6464 GB, free: 38.61 MB / 0.5262 GB Notification: Performance of FrontEnd - Absyn->SCode: time 2.429e-05/2.674e-05, allocations: 2.312 kB / 0.6464 GB, free: 38.61 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites): time 0.004623/0.00465, allocations: 5.73 MB / 0.652 GB, free: 34.91 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.002477/0.007127, allocations: 1.311 MB / 0.6533 GB, free: 34 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0003964/0.007523, allocations: 7.344 kB / 0.6533 GB, free: 34 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0002691/0.007792, allocations: 127.4 kB / 0.6534 GB, free: 33.93 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0006553/0.008448, allocations: 373.1 kB / 0.6538 GB, free: 33.66 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.0005098/0.008958, allocations: 259.6 kB / 0.654 GB, free: 33.49 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.001091/0.01005, allocations: 1.281 MB / 0.6553 GB, free: 32.77 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.000396/0.01044, allocations: 208.6 kB / 0.6555 GB, free: 32.65 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0009016/0.01135, allocations: 0.6537 MB / 0.6561 GB, free: 32.37 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0006922/0.01204, allocations: 390.5 kB / 0.6565 GB, free: 32.24 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0001828/0.01222, allocations: 108.9 kB / 0.6566 GB, free: 32.24 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001769/0.0124, allocations: 108.9 kB / 0.6567 GB, free: 32.24 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 0.0001011/0.0125, allocations: 204.8 kB / 0.6569 GB, free: 32.09 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0003643/0.01286, allocations: 387.7 kB / 0.6573 GB, free: 31.92 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.0007616/0.01363, allocations: 0.7429 MB / 0.658 GB, free: 31.53 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 3.868e-06/0.01363, allocations: 1.281 kB / 0.658 GB, free: 31.53 MB / 0.5262 GB Notification: Performance of FrontEnd: time 1.333e-06/0.01363, allocations: 0 / 0.658 GB, free: 31.53 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 2.208e-05/0.01365, allocations: 0 / 0.658 GB, free: 31.53 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 165 * Number of variables: 165 Notification: Performance of Generate backend data structure: time 0.001687/0.01534, allocations: 1.472 MB / 0.6594 GB, free: 30.39 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 4.3e-05/0.01538, allocations: 12.78 kB / 0.6595 GB, free: 30.39 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0002286/0.01561, allocations: 154.9 kB / 0.6596 GB, free: 30.32 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0005896/0.0162, allocations: 449.7 kB / 0.66 GB, free: 29.98 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 5.897e-05/0.01626, allocations: 52.5 kB / 0.6601 GB, free: 29.96 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001161/0.01638, allocations: 80.03 kB / 0.6602 GB, free: 29.94 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0009348/0.01731, allocations: 0.7232 MB / 0.6609 GB, free: 29.52 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 3.593e-05/0.01735, allocations: 12.11 kB / 0.6609 GB, free: 29.52 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 4.991e-05/0.0174, allocations: 30 kB / 0.6609 GB, free: 29.5 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.762e-05/0.01741, allocations: 17.88 kB / 0.6609 GB, free: 29.5 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0006661/0.01808, allocations: 0.4906 MB / 0.6614 GB, free: 29.25 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.002371/0.02045, allocations: 1.959 MB / 0.6633 GB, free: 27.95 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0006113/0.02106, allocations: 498.8 kB / 0.6638 GB, free: 27.66 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0003229/0.02139, allocations: 337.1 kB / 0.6641 GB, free: 27.43 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 3.092e-05/0.02142, allocations: 15.44 kB / 0.6641 GB, free: 27.43 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0006729/0.02209, allocations: 0.904 MB / 0.665 GB, free: 26.71 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=99): time 2.485e-06/0.02209, allocations: 0 / 0.665 GB, free: 26.71 MB / 0.5262 GB Notification: Performance of matching and sorting (n=105): time 0.003035/0.02513, allocations: 2.634 MB / 0.6676 GB, free: 25.05 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001168/0.02524, allocations: 0.5474 MB / 0.6681 GB, free: 24.4 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0004832/0.02573, allocations: 0.5123 MB / 0.6686 GB, free: 24.14 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 5.941e-05/0.02579, allocations: 57.81 kB / 0.6687 GB, free: 24.09 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0001775/0.02596, allocations: 376.5 kB / 0.669 GB, free: 23.78 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0001972/0.02616, allocations: 347.6 kB / 0.6694 GB, free: 23.5 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0002248/0.02639, allocations: 189.2 kB / 0.6695 GB, free: 23.41 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 0.0001117/0.0265, allocations: 0.5714 MB / 0.6701 GB, free: 22.88 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0004363/0.02693, allocations: 461.2 kB / 0.6705 GB, free: 22.53 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0005405/0.02747, allocations: 0.8271 MB / 0.6713 GB, free: 21.69 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.001289/0.02876, allocations: 1.525 MB / 0.6728 GB, free: 20.31 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.035e-05/0.02877, allocations: 2.781 kB / 0.6728 GB, free: 20.31 MB / 0.5262 GB Notification: Performance of matching and sorting (n=157) (initialization): time 0.001392/0.03017, allocations: 1.361 MB / 0.6742 GB, free: 19.44 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 7.696e-05/0.03024, allocations: 265.2 kB / 0.6744 GB, free: 19.15 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.507e-05/0.03026, allocations: 7.125 kB / 0.6744 GB, free: 19.15 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 2.911e-05/0.03029, allocations: 12.66 kB / 0.6744 GB, free: 19.15 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0007149/0.031, allocations: 251.6 kB / 0.6747 GB, free: 19.12 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 2.359e-05/0.03103, allocations: 15.83 kB / 0.6747 GB, free: 19.12 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0004845/0.03151, allocations: 60.09 kB / 0.6748 GB, free: 19.1 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 6.897e-05/0.03158, allocations: 47.58 kB / 0.6748 GB, free: 19.09 MB / 0.5262 GB Warning: Assuming fixed start value for the following 30 variables: remdesivir.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real remdesivir.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real remdesivir.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real remdesivir.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_704277.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_704277.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_704277.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_704277.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_441524.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_441524.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_441524.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_441524.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_441524.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean GS_441524.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean GS_704277.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean GS_704277.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean remdesivir.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean remdesivir.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 32 * Number of states: 0 () * Number of discrete variables: 63 ($PRE.GS_441524.peripheral.Cmin,GS_441524.peripheral.Cmin,$PRE.GS_441524.peripheral.Cmax,GS_441524.peripheral.Cmax,$PRE.GS_441524.central.Cmin,GS_441524.central.Cmin,$PRE.GS_441524.central.Cmax,GS_441524.central.Cmax,$PRE.GS_704277.peripheral.Cmin,GS_704277.peripheral.Cmin,$PRE.GS_704277.peripheral.Cmax,GS_704277.peripheral.Cmax,$PRE.GS_704277.central.Cmin,GS_704277.central.Cmin,$PRE.GS_704277.central.Cmax,GS_704277.central.Cmax,$PRE.remdesivir.peripheral.Cmin,remdesivir.peripheral.Cmin,$PRE.remdesivir.peripheral.Cmax,remdesivir.peripheral.Cmax,$PRE.remdesivir.central.Cmin,remdesivir.central.Cmin,$PRE.remdesivir.central.Cmax,remdesivir.central.Cmax,$PRE.GS_441524.peripheral.rising,$PRE.GS_441524.periodicDose.pulse.count,$PRE.GS_441524.periodicDose.pulse.T_start,$PRE.GS_441524.central.rising,$PRE.GS_704277.peripheral.rising,$PRE.GS_704277.periodicDose.pulse.count,$PRE.GS_704277.periodicDose.pulse.T_start,$PRE.GS_704277.central.rising,$PRE.remdesivir.peripheral.rising,$PRE.remdesivir.periodicDose.pulse.count,$PRE.remdesivir.periodicDose.pulse.T_start,$PRE.remdesivir.central.rising,GS_441524.peripheral.rising,GS_441524.periodicDose.pulse.count,GS_441524.periodicDose.pulse.T_start,GS_441524.central.rising,GS_704277.peripheral.rising,GS_704277.periodicDose.pulse.count,GS_704277.periodicDose.pulse.T_start,GS_704277.central.rising,remdesivir.peripheral.rising,remdesivir.periodicDose.pulse.count,remdesivir.periodicDose.pulse.T_start,remdesivir.central.rising,$whenCondition12,$whenCondition11,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1,$whenCondition13,$whenCondition14,$whenCondition15) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (148): * Single equations (assignments): 139 * Array equations: 0 * Algorithm blocks: 9 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0005009/0.03208, allocations: 0.5513 MB / 0.6753 GB, free: 18.62 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.000137/0.03222, allocations: 120.6 kB / 0.6755 GB, free: 18.57 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001068/0.03232, allocations: 86.16 kB / 0.6755 GB, free: 18.51 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 7.865e-06/0.03233, allocations: 8.5 kB / 0.6755 GB, free: 18.51 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.231e-05/0.03234, allocations: 0 / 0.6755 GB, free: 18.51 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.012e-05/0.03235, allocations: 6.062 kB / 0.6755 GB, free: 18.51 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002032/0.03439, allocations: 1.89 MB / 0.6774 GB, free: 17.39 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.047e-06/0.03439, allocations: 0 / 0.6774 GB, free: 17.39 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0005943/0.03498, allocations: 158.7 kB / 0.6775 GB, free: 17.38 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 7.624e-06/0.03499, allocations: 9.078 kB / 0.6776 GB, free: 17.37 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 6.226e-05/0.03505, allocations: 30.56 kB / 0.6776 GB, free: 17.36 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 5.571e-06/0.03506, allocations: 7.828 kB / 0.6776 GB, free: 17.36 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.473e-06/0.03506, allocations: 0 / 0.6776 GB, free: 17.36 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.001595/0.03666, allocations: 1.716 MB / 0.6793 GB, free: 16.3 MB / 0.5262 GB Notification: Performance of postOpt removeConstants (simulation): time 8.987e-05/0.03675, allocations: 75.7 kB / 0.6793 GB, free: 16.25 MB / 0.5262 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.000118/0.03686, allocations: 39.09 kB / 0.6794 GB, free: 16.23 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002995/0.03716, allocations: 43.05 kB / 0.6794 GB, free: 16.22 MB / 0.5262 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001717/0.03733, allocations: 84.89 kB / 0.6795 GB, free: 16.2 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 5.275e-05/0.03739, allocations: 36.19 kB / 0.6795 GB, free: 16.19 MB / 0.5262 GB Notification: Performance of sorting global known variables: time 0.0002938/0.03768, allocations: 341.7 kB / 0.6799 GB, free: 16.02 MB / 0.5262 GB Notification: Performance of sort global known variables: time 7e-08/0.03768, allocations: 0 / 0.6799 GB, free: 16.02 MB / 0.5262 GB Notification: Performance of remove unused functions: time 0.0006577/0.03834, allocations: 257.5 kB / 0.6801 GB, free: 16 MB / 0.5262 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 21 (remdesivir.central.C,remdesivir.central.AUC,remdesivir.elim.MExc,remdesivir.periodicDose.TotalCumulativeMass,remdesivir.periodicDose.variableDose.TotalCumulativeMass,remdesivir.peripheral.C,remdesivir.peripheral.AUC,GS_704277.central.C,GS_704277.central.AUC,GS_704277.elim.MExc,GS_704277.periodicDose.TotalCumulativeMass,GS_704277.periodicDose.variableDose.TotalCumulativeMass,GS_704277.peripheral.C,GS_704277.peripheral.AUC,GS_441524.central.C,GS_441524.central.AUC,GS_441524.elim.MExc,GS_441524.periodicDose.TotalCumulativeMass,GS_441524.periodicDose.variableDose.TotalCumulativeMass,GS_441524.peripheral.C,GS_441524.peripheral.AUC) * Number of discrete variables: 39 ($whenCondition15,$whenCondition14,$whenCondition13,$whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,$whenCondition11,$whenCondition12,remdesivir.central.Cmax,remdesivir.central.Cmin,remdesivir.central.rising,remdesivir.periodicDose.pulse.T_start,remdesivir.periodicDose.pulse.count,remdesivir.peripheral.Cmax,remdesivir.peripheral.Cmin,remdesivir.peripheral.rising,GS_704277.central.Cmax,GS_704277.central.Cmin,GS_704277.central.rising,GS_704277.periodicDose.pulse.T_start,GS_704277.periodicDose.pulse.count,GS_704277.peripheral.Cmax,GS_704277.peripheral.Cmin,GS_704277.peripheral.rising,GS_441524.central.Cmax,GS_441524.central.Cmin,GS_441524.central.rising,GS_441524.periodicDose.pulse.T_start,GS_441524.periodicDose.pulse.count,GS_441524.peripheral.Cmax,GS_441524.peripheral.Cmin,GS_441524.peripheral.rising) * Number of discrete states: 33 (remdesivir.periodicDose.pulse.count,GS_704277.periodicDose.pulse.count,GS_441524.periodicDose.pulse.count,GS_441524.peripheral.Cmin,$whenCondition12,GS_441524.peripheral.Cmax,$whenCondition11,GS_441524.peripheral.rising,GS_441524.central.Cmin,$whenCondition10,GS_441524.central.Cmax,$whenCondition9,GS_441524.central.rising,GS_704277.peripheral.Cmin,$whenCondition8,GS_704277.peripheral.Cmax,$whenCondition7,GS_704277.peripheral.rising,GS_704277.central.Cmin,$whenCondition6,GS_704277.central.Cmax,$whenCondition5,GS_704277.central.rising,remdesivir.peripheral.Cmin,$whenCondition4,remdesivir.peripheral.Cmax,$whenCondition3,remdesivir.peripheral.rising,remdesivir.central.Cmin,$whenCondition2,remdesivir.central.Cmax,$whenCondition1,remdesivir.central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (87): * Single equations (assignments): 75 * Array equations: 0 * Algorithm blocks: 6 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.000184/0.03852, allocations: 187.4 kB / 0.6803 GB, free: 15.87 MB / 0.5262 GB Notification: Performance of simCode: created initialization part: time 0.001131/0.03965, allocations: 1.506 MB / 0.6818 GB, free: 14.68 MB / 0.5262 GB Notification: Performance of simCode: created event and clocks part: time 1.813e-06/0.03966, allocations: 0 / 0.6818 GB, free: 14.68 MB / 0.5262 GB Notification: Performance of simCode: created simulation system equations: time 0.0005382/0.04019, allocations: 0.8193 MB / 0.6826 GB, free: 14.03 MB / 0.5262 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0009246/0.04112, allocations: 266.4 kB / 0.6828 GB, free: 13.95 MB / 0.5262 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003908/0.04503, allocations: 2.351 MB / 0.6851 GB, free: 12.48 MB / 0.5262 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001418/0.04517, allocations: 174.1 kB / 0.6853 GB, free: 12.4 MB / 0.5262 GB Notification: Performance of simCode: alias equations: time 0.0003366/0.04551, allocations: 90.81 kB / 0.6854 GB, free: 12.38 MB / 0.5262 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001582/0.04566, allocations: 65.88 kB / 0.6854 GB, free: 12.37 MB / 0.5262 GB Notification: Performance of SimCode: time 6.41e-07/0.04566, allocations: 0 / 0.6854 GB, free: 12.37 MB / 0.5262 GB Notification: Performance of Templates: time 0.01781/0.06347, allocations: 13.4 MB / 0.6985 GB, free: 3.184 MB / 0.5262 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.sim & ./Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites -abortSlowSimulation -alarm=240 -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 6.504143706988543]