Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.002282/0.002282, allocations: 85.66 kB / 19.4 MB, free: 380 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002119/0.002119, allocations: 168.9 kB / 22.71 MB, free: 1.711 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.558/1.558, allocations: 177.1 MB / 203.1 MB, free: 5.621 MB / 186.7 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1441/0.1441, allocations: 17.38 MB / 276.9 MB, free: 11.7 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.184e-06/2.184e-06, allocations: 0 / 352.6 MB, free: 10.37 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 3.188e-05/3.406e-05, allocations: 2.312 kB / 352.6 MB, free: 10.36 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.2779/0.2779, allocations: 85.29 MB / 437.9 MB, free: 10.11 MB / 330.7 MB
Notification: Performance of NFInst.instExpressions: time 0.502/0.7799, allocations: 220.3 MB / 0.6427 GB, free: 2.891 MB / 442.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01675/0.7967, allocations: 228.8 kB / 0.643 GB, free: 2.891 MB / 442.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.01595/0.8126, allocations: 4.516 MB / 0.6474 GB, free: 1.371 MB / 442.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.06168/0.8743, allocations: 18.52 MB / 0.6655 GB, free: 8.93 MB / 458.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.0992/0.9735, allocations: 33.51 MB / 0.6982 GB, free: 2.969 MB / 474.7 MB
Notification: Performance of NFFlatten.flatten: time 0.586/1.56, allocations: 91.36 MB / 0.7874 GB, free: 6.547 MB / 0.5105 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.07834/1.638, allocations: 54.61 MB / 0.8407 GB, free: 13.14 MB / 0.5262 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.1748/1.813, allocations: 77.96 MB / 0.9169 GB, free: 7.793 MB / 0.5574 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.1571/1.97, allocations: 51.33 MB / 0.967 GB, free: 8.164 MB / 0.6043 GB
Notification: Performance of NFPackage.collectConstants: time 0.5701/2.54, allocations: 12.2 MB / 0.9789 GB, free: 56.84 MB / 0.6044 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1017/2.642, allocations: 34.09 MB / 1.012 GB, free: 56.84 MB / 0.6044 GB
Notification: Performance of NFScalarize.scalarize: time 0.03615/2.678, allocations: 24.28 MB / 1.036 GB, free: 56.84 MB / 0.6044 GB
Notification: Performance of NFVerifyModel.verify: time 0.06771/2.745, allocations: 31.12 MB / 1.066 GB, free: 56.84 MB / 0.6044 GB
Notification: Performance of NFConvertDAE.convert: time 0.1925/2.938, allocations: 108.6 MB / 1.172 GB, free: 11.78 MB / 0.62 GB
Notification: Performance of FrontEnd - DAE generated: time 6.432e-06/2.938, allocations: 0 / 1.172 GB, free: 11.78 MB / 0.62 GB
Notification: Performance of FrontEnd: time 1.412e-06/2.938, allocations: 0 / 1.172 GB, free: 11.78 MB / 0.62 GB
Notification: Performance of Transformations before backend: time 0.003308/2.941, allocations: 0.8125 kB / 1.172 GB, free: 11.78 MB / 0.62 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.628/3.569, allocations: 73.76 MB / 1.244 GB, free: 238.2 MB / 0.6515 GB
Notification: Performance of prepare preOptimizeDAE: time 4.398e-05/3.569, allocations: 7.875 kB / 1.244 GB, free: 238.2 MB / 0.6515 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.1137/3.683, allocations: 19.72 MB / 1.264 GB, free: 232.5 MB / 0.6515 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0959/3.779, allocations: 38.1 MB / 1.301 GB, free: 216.1 MB / 0.6515 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.007286/3.786, allocations: 9.208 MB / 1.31 GB, free: 207.7 MB / 0.6515 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02899/3.815, allocations: 4.556 MB / 1.314 GB, free: 205.3 MB / 0.6515 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.2229/4.038, allocations: 57.92 MB / 1.371 GB, free: 151.4 MB / 0.6515 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002297/4.04, allocations: 23.94 kB / 1.371 GB, free: 151.4 MB / 0.6515 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.02083/4.061, allocations: 1.764 MB / 1.373 GB, free: 149.6 MB / 0.6515 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0007356/4.062, allocations: 1.059 MB / 1.374 GB, free: 148.5 MB / 0.6515 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1889/4.251, allocations: 61.52 MB / 1.434 GB, free: 86.92 MB / 0.6515 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.9306/5.181, allocations: 281.5 MB / 1.709 GB, free: 86.7 MB / 0.6515 GB
Notification: Performance of preOpt comSubExp (simulation): time 3.127/8.308, allocations: 0.9234 GB / 2.632 GB, free: 201.8 MB / 0.6515 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.06699/8.375, allocations: 23.26 MB / 2.655 GB, free: 201.3 MB / 0.6515 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.4013/8.777, allocations: 166.2 MB / 2.817 GB, free: 89.52 MB / 0.6515 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002447/8.777, allocations: 344.7 kB / 2.817 GB, free: 89.17 MB / 0.6515 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.08698/8.864, allocations: 27.7 MB / 2.844 GB, free: 62.78 MB / 0.6515 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001313/8.864, allocations: 0 / 2.844 GB, free: 62.78 MB / 0.6515 GB
Notification: Performance of matching and sorting (n=3387): time 2.045/10.91, allocations: 235.2 MB / 3.074 GB, free: 96.62 MB / 0.6515 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.00025/10.91, allocations: 453.3 kB / 3.075 GB, free: 96.14 MB / 0.6515 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.05027/10.96, allocations: 26.15 MB / 3.1 GB, free: 70.73 MB / 0.6515 GB
Notification: Performance of collectPreVariables (initialization): time 0.01079/10.97, allocations: 0.5681 MB / 3.101 GB, free: 70.16 MB / 0.6515 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01696/10.99, allocations: 23.3 MB / 3.123 GB, free: 49.53 MB / 0.6515 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02616/11.01, allocations: 15.03 MB / 3.138 GB, free: 35.49 MB / 0.6515 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.3245/11.34, allocations: 10.54 MB / 3.148 GB, free: 159.3 MB / 0.6515 GB
Notification: Performance of setup shared object (initialization): time 8.092e-05/11.34, allocations: 479.9 kB / 3.149 GB, free: 158.8 MB / 0.6515 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.04669/11.39, allocations: 11.79 MB / 3.16 GB, free: 158.7 MB / 0.6515 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.05678/11.44, allocations: 32.74 MB / 3.192 GB, free: 134.3 MB / 0.6515 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.09774/11.54, allocations: 48.85 MB / 3.24 GB, free: 108 MB / 0.6515 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0006646/11.54, allocations: 125.5 kB / 3.24 GB, free: 108 MB / 0.6515 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.25/12.79, allocations: 135.8 MB / 3.373 GB, free: 33.4 MB / 0.6515 GB
Notification: Performance of prepare postOptimizeDAE: time 0.001192/12.79, allocations: 196.2 kB / 3.373 GB, free: 33.21 MB / 0.6515 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.001314/12.79, allocations: 449.2 kB / 3.373 GB, free: 32.77 MB / 0.6515 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.8056/13.6, allocations: 158.9 MB / 3.529 GB, free: 86.42 MB / 0.6515 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.05527/13.65, allocations: 11.25 MB / 3.54 GB, free: 84.25 MB / 0.6515 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.6902/14.34, allocations: 88.27 MB / 3.626 GB, free: 94.83 MB / 0.6515 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05681/14.4, allocations: 2.508 MB / 3.628 GB, free: 94.83 MB / 0.6515 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01578/14.42, allocations: 2.8 MB / 3.631 GB, free: 94.83 MB / 0.6515 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.03677/14.45, allocations: 2.939 MB / 3.634 GB, free: 94.39 MB / 0.6515 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02866/14.48, allocations: 4.203 MB / 3.638 GB, free: 94.39 MB / 0.6515 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.7611/15.24, allocations: 91.85 MB / 3.728 GB, free: 92.27 MB / 0.6515 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0005169/15.24, allocations: 360.4 kB / 3.728 GB, free: 92.27 MB / 0.6515 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0006964/15.24, allocations: 62.22 kB / 3.728 GB, free: 92.26 MB / 0.6515 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001355/15.25, allocations: 176.6 kB / 3.728 GB, free: 92.26 MB / 0.6515 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.156/16.4, allocations: 147.7 MB / 3.873 GB, free: 104.3 MB / 0.6515 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0004271/16.4, allocations: 9.469 kB / 3.873 GB, free: 104.3 MB / 0.6515 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04323/16.44, allocations: 7.319 MB / 3.88 GB, free: 104 MB / 0.6515 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.2571/16.7, allocations: 53.09 MB / 3.932 GB, free: 102.1 MB / 0.6515 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01048/16.71, allocations: 1.425 MB / 3.933 GB, free: 102.1 MB / 0.6515 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.2571/16.97, allocations: 49.5 MB / 3.981 GB, free: 82.96 MB / 0.6515 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 8.366e-06/16.97, allocations: 15.34 kB / 3.981 GB, free: 82.96 MB / 0.6515 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.17/18.14, allocations: 104.8 MB / 4.084 GB, free: 91.05 MB / 0.6515 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03433/18.17, allocations: 9.858 MB / 4.093 GB, free: 91.05 MB / 0.6515 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01816/18.19, allocations: 0.8933 MB / 4.094 GB, free: 91.05 MB / 0.6515 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03887/18.23, allocations: 1.574 MB / 4.096 GB, free: 91.05 MB / 0.6515 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02133/18.25, allocations: 5.148 MB / 4.101 GB, free: 91.01 MB / 0.6515 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01136/18.26, allocations: 1.382 MB / 4.102 GB, free: 91.01 MB / 0.6515 GB
Notification: Performance of sorting global known variables: time 0.03572/18.3, allocations: 14.84 MB / 4.117 GB, free: 90.05 MB / 0.6515 GB
Notification: Performance of sort global known variables: time 5.21e-07/18.3, allocations: 0 / 4.117 GB, free: 90.05 MB / 0.6515 GB
Notification: Performance of remove unused functions: time 0.09095/18.39, allocations: 19.75 MB / 4.136 GB, free: 90.05 MB / 0.6515 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.05174/18.44, allocations: 11.23 MB / 4.147 GB, free: 89.73 MB / 0.6515 GB
Notification: Performance of simCode: created initialization part: time 0.2074/18.65, allocations: 42.52 MB / 4.188 GB, free: 85.29 MB / 0.6515 GB
Notification: Performance of simCode: created event and clocks part: time 2.923e-05/18.65, allocations: 4.844 kB / 4.188 GB, free: 85.29 MB / 0.6515 GB
Notification: Performance of simCode: created simulation system equations: time 0.1089/18.76, allocations: 23.03 MB / 4.211 GB, free: 71.91 MB / 0.6515 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.06821/18.83, allocations: 8.223 MB / 4.219 GB, free: 65.72 MB / 0.6515 GB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.6126/19.44, allocations: 92.68 MB / 4.309 GB, free: 113.8 MB / 0.6671 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.03479/19.47, allocations: 13.93 MB / 4.323 GB, free: 112.5 MB / 0.6671 GB
Notification: Performance of simCode: alias equations: time 0.05338/19.53, allocations: 12.44 MB / 4.335 GB, free: 112 MB / 0.6671 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02529/19.55, allocations: 3.866 MB / 4.339 GB, free: 112 MB / 0.6671 GB
Notification: Performance of SimCode: time 2.013e-06/19.55, allocations: 0 / 4.339 GB, free: 112 MB / 0.6671 GB
Notification: Performance of Templates: time 2.66/22.21, allocations: 1.028 GB / 5.367 GB, free: 139 MB / 0.6984 GB
"
[Timeout remaining time 638]
make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 63.99777090107091]