Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001311/0.001311, allocations: 99.75 kB / 18.94 MB, free: 2.832 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001513/0.001513, allocations: 217 kB / 22.25 MB, free: 5.105 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.378/1.378, allocations: 230.6 MB / 256 MB, free: 7.836 MB / 206.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.131/0.131, allocations: 23.88 MB / 336.3 MB, free: 11 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.001995/0.001995, allocations: 71.89 kB / 471.6 MB, free: 7.039 MB / 334.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.2959/0.2979, allocations: 59.87 MB / 0.519 GB, free: 9.758 MB / 382.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.1201/0.418, allocations: 74.26 MB / 0.5915 GB, free: 15.54 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.4757/0.8936, allocations: 191.2 MB / 0.7783 GB, free: 16.13 MB / 0.5606 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01206/0.9057, allocations: 233 kB / 0.7785 GB, free: 16.13 MB / 0.5606 GB
Notification: Performance of NFTyping.typeComponents: time 0.01347/0.9192, allocations: 4.448 MB / 0.7829 GB, free: 16.1 MB / 0.5606 GB
Notification: Performance of NFTyping.typeBindings: time 0.04754/0.9667, allocations: 17.87 MB / 0.8003 GB, free: 15.6 MB / 0.5606 GB
Notification: Performance of NFTyping.typeClassSections: time 0.07128/1.038, allocations: 32.66 MB / 0.8322 GB, free: 68 kB / 0.5606 GB
Notification: Performance of NFFlatten.flatten: time 0.09313/1.131, allocations: 89.12 MB / 0.9192 GB, free: 2.258 MB / 0.6388 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.07621/1.207, allocations: 52.29 MB / 0.9703 GB, free: 15.85 MB / 0.7013 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.6882/1.896, allocations: 56.58 MB / 1.026 GB, free: 44.02 MB / 0.7169 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.08003/1.976, allocations: 52.03 MB / 1.076 GB, free: 41.18 MB / 0.7169 GB
Notification: Performance of NFPackage.collectConstants: time 0.03192/2.008, allocations: 12.21 MB / 1.088 GB, free: 41.18 MB / 0.7169 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.09183/2.099, allocations: 34.5 MB / 1.122 GB, free: 32.83 MB / 0.7169 GB
Notification: Performance of NFScalarize.scalarize: time 0.03904/2.138, allocations: 24.02 MB / 1.145 GB, free: 13.28 MB / 0.7169 GB
Notification: Performance of NFVerifyModel.verify: time 0.1075/2.246, allocations: 39.01 MB / 1.184 GB, free: 12.91 MB / 0.7326 GB
Notification: Performance of NFConvertDAE.convert: time 0.9206/3.167, allocations: 159.6 MB / 1.339 GB, free: 108.5 MB / 0.8421 GB
Notification: Performance of FrontEnd - DAE generated: time 5.771e-06/3.167, allocations: 0 / 1.339 GB, free: 108.5 MB / 0.8421 GB
Notification: Performance of FrontEnd: time 1.463e-06/3.167, allocations: 1.031 kB / 1.339 GB, free: 108.5 MB / 0.8421 GB
Notification: Performance of Transformations before backend: time 0.002977/3.17, allocations: 0.9688 kB / 1.339 GB, free: 108.5 MB / 0.8421 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2586/3.428, allocations: 71.67 MB / 1.409 GB, free: 88.1 MB / 0.8421 GB
Notification: Performance of prepare preOptimizeDAE: time 3.799e-05/3.428, allocations: 13.33 kB / 1.409 GB, free: 88.1 MB / 0.8421 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08179/3.51, allocations: 11.94 MB / 1.421 GB, free: 85.05 MB / 0.8421 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1163/3.626, allocations: 42.63 MB / 1.463 GB, free: 77.94 MB / 0.8421 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.006023/3.632, allocations: 9.236 MB / 1.472 GB, free: 69.43 MB / 0.8421 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03445/3.667, allocations: 4.595 MB / 1.476 GB, free: 67.77 MB / 0.8421 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.285/3.952, allocations: 112.9 MB / 1.586 GB, free: 2.898 MB / 0.8889 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002275/3.954, allocations: 32.48 kB / 1.587 GB, free: 2.887 MB / 0.8889 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03232/3.986, allocations: 1.758 MB / 1.588 GB, free: 1.129 MB / 0.8889 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0009933/3.987, allocations: 1.06 MB / 1.589 GB, free: 72 kB / 0.8889 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.5934/4.581, allocations: 153 MB / 1.739 GB, free: 352.3 MB / 0.9514 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.162/5.742, allocations: 389 MB / 2.119 GB, free: 319.2 MB / 0.9514 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.032/7.775, allocations: 0.6474 GB / 2.766 GB, free: 259.6 MB / 0.9514 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.08574/7.86, allocations: 60.06 MB / 2.825 GB, free: 207.2 MB / 0.9514 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.8034/8.664, allocations: 254.6 MB / 3.073 GB, free: 315.5 MB / 0.9514 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002515/8.664, allocations: 340 kB / 3.074 GB, free: 315.4 MB / 0.9514 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09471/8.759, allocations: 29.13 MB / 3.102 GB, free: 315.4 MB / 0.9514 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001976/8.759, allocations: 0 / 3.102 GB, free: 315.4 MB / 0.9514 GB
Notification: Performance of matching and sorting (n=3387): time 2.294/11.05, allocations: 423.7 MB / 3.516 GB, free: 316 MB / 0.9514 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002269/11.05, allocations: 459.4 kB / 3.516 GB, free: 315.9 MB / 0.9514 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.04778/11.1, allocations: 30.72 MB / 3.546 GB, free: 305.4 MB / 0.9514 GB
Notification: Performance of collectPreVariables (initialization): time 0.01213/11.11, allocations: 0.5719 MB / 3.547 GB, free: 305 MB / 0.9514 GB
Notification: Performance of collectInitialEqns (initialization): time 0.0143/11.13, allocations: 21.64 MB / 3.568 GB, free: 292.6 MB / 0.9514 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02212/11.15, allocations: 12.41 MB / 3.58 GB, free: 282.9 MB / 0.9514 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.04726/11.2, allocations: 9.933 MB / 3.59 GB, free: 279.1 MB / 0.9514 GB
Notification: Performance of setup shared object (initialization): time 4.108e-05/11.2, allocations: 301.1 kB / 3.59 GB, free: 278.8 MB / 0.9514 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.06156/11.26, allocations: 39.04 MB / 3.628 GB, free: 263.1 MB / 0.9514 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.07316/11.33, allocations: 53.24 MB / 3.68 GB, free: 222.7 MB / 0.9514 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1307/11.46, allocations: 96.37 MB / 3.774 GB, free: 120.7 MB / 0.9514 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004077/11.46, allocations: 124 kB / 3.774 GB, free: 120.6 MB / 0.9514 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.627/13.09, allocations: 257.1 MB / 4.026 GB, free: 246.5 MB / 0.9514 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0003555/13.09, allocations: 196.2 kB / 4.026 GB, free: 246.5 MB / 0.9514 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0006438/13.09, allocations: 443.7 kB / 4.026 GB, free: 246.5 MB / 0.9514 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1737/13.26, allocations: 73.71 MB / 4.098 GB, free: 199.4 MB / 0.9514 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.049/13.31, allocations: 11.18 MB / 4.109 GB, free: 188.9 MB / 0.9514 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.8623/14.18, allocations: 309.6 MB / 4.411 GB, free: 232.9 MB / 0.9514 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05214/14.23, allocations: 2.478 MB / 4.414 GB, free: 232.2 MB / 0.9514 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0145/14.24, allocations: 2.803 MB / 4.417 GB, free: 231.9 MB / 0.9514 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.04676/14.29, allocations: 18.34 MB / 4.434 GB, free: 224.1 MB / 0.9514 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01976/14.31, allocations: 3.165 MB / 4.438 GB, free: 224.1 MB / 0.9514 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.8199/15.13, allocations: 152.3 MB / 4.586 GB, free: 113.8 MB / 0.9514 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003116/15.13, allocations: 360 kB / 4.587 GB, free: 113.5 MB / 0.9514 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0004185/15.13, allocations: 56 kB / 4.587 GB, free: 113.4 MB / 0.9514 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001106/15.13, allocations: 183.2 kB / 4.587 GB, free: 113.2 MB / 0.9514 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.261/16.39, allocations: 223.2 MB / 4.805 GB, free: 239.1 MB / 0.9514 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0003988/16.39, allocations: 11.59 kB / 4.805 GB, free: 239.1 MB / 0.9514 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04087/16.43, allocations: 7.253 MB / 4.812 GB, free: 238.5 MB / 0.9514 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.0936/16.53, allocations: 39.74 MB / 4.851 GB, free: 229.8 MB / 0.9514 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01114/16.54, allocations: 1.449 MB / 4.852 GB, free: 229.2 MB / 0.9514 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3179/16.86, allocations: 155.6 MB / 5.004 GB, free: 100.5 MB / 0.9514 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 7.334e-06/16.86, allocations: 15.94 kB / 5.004 GB, free: 100.4 MB / 0.9514 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.224/18.08, allocations: 200.2 MB / 5.2 GB, free: 227.3 MB / 0.9514 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03721/18.12, allocations: 11.32 MB / 5.211 GB, free: 223.6 MB / 0.9514 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01826/18.13, allocations: 0.9178 MB / 5.212 GB, free: 223 MB / 0.9514 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03992/18.17, allocations: 1.545 MB / 5.213 GB, free: 222.5 MB / 0.9514 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02206/18.2, allocations: 4.686 MB / 5.218 GB, free: 221.9 MB / 0.9514 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01/18.21, allocations: 1.384 MB / 5.219 GB, free: 221.6 MB / 0.9514 GB
Notification: Performance of sorting global known variables: time 0.03283/18.24, allocations: 20.8 MB / 5.239 GB, free: 214 MB / 0.9514 GB
Notification: Performance of sort global known variables: time 1.61e-07/18.24, allocations: 0 / 5.239 GB, free: 214 MB / 0.9514 GB
Notification: Performance of remove unused functions: time 0.08266/18.32, allocations: 20.22 MB / 5.259 GB, free: 210.9 MB / 0.9514 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.02836/18.35, allocations: 10.8 MB / 5.27 GB, free: 208 MB / 0.9514 GB
Notification: Performance of simCode: created initialization part: time 0.1886/18.54, allocations: 85.29 MB / 5.353 GB, free: 156.1 MB / 0.9514 GB
Notification: Performance of simCode: created event and clocks part: time 1.366e-05/18.54, allocations: 4.938 kB / 5.353 GB, free: 156.1 MB / 0.9514 GB
Notification: Performance of simCode: created simulation system equations: time 0.1222/18.66, allocations: 54.53 MB / 5.406 GB, free: 108.3 MB / 0.9514 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05402/18.72, allocations: 7.695 MB / 5.414 GB, free: 100.9 MB / 0.9514 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.6342/19.35, allocations: 122.9 MB / 5.534 GB, free: 237.7 MB / 0.9514 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05607/19.41, allocations: 30.56 MB / 5.564 GB, free: 235.5 MB / 0.9514 GB
Notification: Performance of simCode: alias equations: time 0.05136/19.46, allocations: 15.45 MB / 5.579 GB, free: 235 MB / 0.9514 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02185/19.48, allocations: 4.246 MB / 5.583 GB, free: 235 MB / 0.9514 GB
Notification: Performance of SimCode: time 1.243e-06/19.48, allocations: 1.75 kB / 5.583 GB, free: 235 MB / 0.9514 GB
Notification: Performance of Templates: time 2.34/21.82, allocations: 1.075 GB / 6.657 GB, free: 235.1 MB / 0.9514 GB
"
[Timeout remaining time 638]
make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 60.796016657259315]
Failed to read output from testmodel.py, exit status != 0:
21.82768472470343 21.844441803 18.674219277
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7f8d0251ef50>