Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001582/0.001582, allocations: 103.6 kB / 18.95 MB, free: 2.66 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002047/0.002047, allocations: 220.7 kB / 22.25 MB, free: 5.258 MB / 14.72 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.367/1.367, allocations: 230.6 MB / 256 MB, free: 7.793 MB / 206.1 MB " [Timeout remaining time 178] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1302/0.1302, allocations: 23.89 MB / 336.3 MB, free: 10.94 MB / 270.1 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation") translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation") [Timeout 660] "Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.002039/0.002039, allocations: 68.17 kB / 471.6 MB, free: 6.969 MB / 334.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.2895/0.2915, allocations: 59.87 MB / 0.5191 GB, free: 9.777 MB / 382.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation): time 0.08496/0.3765, allocations: 39.96 MB / 0.5581 GB, free: 0.832 MB / 398.1 MB Notification: Performance of NFInst.instExpressions: time 0.0839/0.4604, allocations: 64.09 MB / 0.6207 GB, free: 1.594 MB / 462.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.004747/0.4651, allocations: 75.38 kB / 0.6207 GB, free: 1.52 MB / 462.1 MB Notification: Performance of NFTyping.typeComponents: time 0.005378/0.4705, allocations: 1.481 MB / 0.6222 GB, free: 28 kB / 462.1 MB Notification: Performance of NFTyping.typeBindings: time 0.0183/0.4888, allocations: 5.994 MB / 0.628 GB, free: 9.992 MB / 478.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.02708/0.5159, allocations: 10.4 MB / 0.6382 GB, free: 15.54 MB / 494.1 MB Notification: Performance of NFFlatten.flatten: time 0.02972/0.5456, allocations: 26.67 MB / 0.6642 GB, free: 4.777 MB / 0.4981 GB Notification: Performance of NFFlatten.resolveConnections: time 0.02251/0.5681, allocations: 16.27 MB / 0.6801 GB, free: 4.391 MB / 0.5137 GB Notification: Performance of NFEvalConstants.evaluate: time 0.02835/0.5965, allocations: 17.82 MB / 0.6975 GB, free: 2.535 MB / 0.5294 GB Notification: Performance of NFSimplifyModel.simplify: time 0.03174/0.6282, allocations: 16.73 MB / 0.7139 GB, free: 1.758 MB / 0.545 GB Notification: Performance of NFPackage.collectConstants: time 0.01215/0.6404, allocations: 3.129 MB / 0.7169 GB, free: 14.62 MB / 0.5606 GB Notification: Performance of NFFlatten.collectFunctions: time 0.03352/0.6739, allocations: 10.52 MB / 0.7272 GB, free: 4.098 MB / 0.5606 GB Notification: Performance of NFScalarize.scalarize: time 0.4576/1.131, allocations: 7.065 MB / 0.7341 GB, free: 51.29 MB / 0.5607 GB Notification: Performance of NFVerifyModel.verify: time 0.02743/1.159, allocations: 10.51 MB / 0.7444 GB, free: 51.29 MB / 0.5607 GB Notification: Performance of NFConvertDAE.convert: time 0.05995/1.219, allocations: 44.91 MB / 0.7882 GB, free: 47.25 MB / 0.5607 GB Notification: Performance of FrontEnd - DAE generated: time 5.2e-06/1.219, allocations: 0.5 kB / 0.7882 GB, free: 47.25 MB / 0.5607 GB Notification: Performance of FrontEnd: time 1.313e-06/1.219, allocations: 0 / 0.7882 GB, free: 47.25 MB / 0.5607 GB Notification: Performance of Transformations before backend: time 0.0009136/1.22, allocations: 1.031 kB / 0.7882 GB, free: 47.25 MB / 0.5607 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 3808 * Number of variables: 3808 Notification: Performance of Generate backend data structure: time 0.07745/1.297, allocations: 23.66 MB / 0.8113 GB, free: 34.65 MB / 0.5607 GB Notification: Performance of prepare preOptimizeDAE: time 3.471e-05/1.297, allocations: 10.5 kB / 0.8113 GB, free: 34.65 MB / 0.5607 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02439/1.322, allocations: 3.98 MB / 0.8152 GB, free: 32.87 MB / 0.5607 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.03254/1.354, allocations: 12.63 MB / 0.8275 GB, free: 26.28 MB / 0.5607 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.001616/1.356, allocations: 3.069 MB / 0.8305 GB, free: 23.45 MB / 0.5607 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.009597/1.365, allocations: 1.535 MB / 0.832 GB, free: 22.89 MB / 0.5607 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.07443/1.44, allocations: 35.25 MB / 0.8665 GB, free: 12.06 MB / 0.5763 GB Notification: Performance of preOpt findStateOrder (simulation): time 0.0004115/1.44, allocations: 10.66 kB / 0.8665 GB, free: 12.05 MB / 0.5763 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.007855/1.448, allocations: 0.5898 MB / 0.867 GB, free: 11.46 MB / 0.5763 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003385/1.448, allocations: 360 kB / 0.8674 GB, free: 11.11 MB / 0.5763 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.09751/1.546, allocations: 47.47 MB / 0.9137 GB, free: 11.66 MB / 0.6232 GB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.5076/2.054, allocations: 116.5 MB / 1.028 GB, free: 190.3 MB / 0.67 GB Notification: Performance of preOpt comSubExp (simulation): time 0.5313/2.585, allocations: 218.4 MB / 1.241 GB, free: 17.5 MB / 0.67 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.245/2.83, allocations: 18.49 MB / 1.259 GB, free: 231.7 MB / 0.67 GB Notification: Performance of preOpt evalFunc (simulation): time 0.1472/2.977, allocations: 76.47 MB / 1.334 GB, free: 203.3 MB / 0.67 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001062/2.977, allocations: 135.5 kB / 1.334 GB, free: 203.2 MB / 0.67 GB Notification: Performance of preOpt simplifyInStream (simulation): time 0.02551/3.003, allocations: 6.282 MB / 1.34 GB, free: 200.1 MB / 0.67 GB Notification: Performance of pre-optimization done (n=995): time 3.469e-05/3.003, allocations: 0 / 1.34 GB, free: 200.1 MB / 0.67 GB Notification: Performance of matching and sorting (n=1129): time 0.6677/3.67, allocations: 135.7 MB / 1.472 GB, free: 65.87 MB / 0.67 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001033/3.67, allocations: 168.2 kB / 1.472 GB, free: 65.69 MB / 0.67 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.01583/3.686, allocations: 9.742 MB / 1.482 GB, free: 55.98 MB / 0.67 GB Notification: Performance of collectPreVariables (initialization): time 0.004692/3.691, allocations: 213.7 kB / 1.482 GB, free: 55.76 MB / 0.67 GB Notification: Performance of collectInitialEqns (initialization): time 0.004244/3.695, allocations: 7.121 MB / 1.489 GB, free: 48.64 MB / 0.67 GB Notification: Performance of collectInitialBindings (initialization): time 0.006824/3.702, allocations: 4.106 MB / 1.493 GB, free: 44.59 MB / 0.67 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.01362/3.716, allocations: 3.272 MB / 1.496 GB, free: 41.3 MB / 0.67 GB Notification: Performance of setup shared object (initialization): time 3.743e-05/3.716, allocations: 301.1 kB / 1.497 GB, free: 41.01 MB / 0.67 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.019/3.735, allocations: 11.85 MB / 1.508 GB, free: 29.15 MB / 0.67 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.2678/4.003, allocations: 16.56 MB / 1.524 GB, free: 207.9 MB / 0.67 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.05218/4.055, allocations: 29.75 MB / 1.553 GB, free: 198 MB / 0.67 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0001859/4.055, allocations: 44.34 kB / 1.554 GB, free: 198 MB / 0.67 GB Notification: Performance of matching and sorting (n=1889) (initialization): time 0.4344/4.489, allocations: 81.38 MB / 1.633 GB, free: 159.3 MB / 0.67 GB Notification: Performance of prepare postOptimizeDAE: time 0.0001626/4.489, allocations: 68 kB / 1.633 GB, free: 159.2 MB / 0.67 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0002633/4.49, allocations: 152 kB / 1.633 GB, free: 159.1 MB / 0.67 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.05598/4.546, allocations: 22.37 MB / 1.655 GB, free: 136.9 MB / 0.67 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01581/4.562, allocations: 3.725 MB / 1.659 GB, free: 133.2 MB / 0.67 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.1607/4.722, allocations: 92.36 MB / 1.749 GB, free: 40.56 MB / 0.67 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.01665/4.739, allocations: 0.8235 MB / 1.75 GB, free: 39.74 MB / 0.67 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.003459/4.742, allocations: 0.9367 MB / 1.751 GB, free: 38.8 MB / 0.67 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 677 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (1841): * Single equations (assignments): 1838 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of prepare postOptimizeDAE: time 0.0106/4.753, allocations: 5.376 MB / 1.756 GB, free: 33.5 MB / 0.67 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.003185/4.756, allocations: 1.063 MB / 1.757 GB, free: 33.03 MB / 0.67 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.4827/5.239, allocations: 48.41 MB / 1.804 GB, free: 196.7 MB / 0.67 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0001352/5.239, allocations: 121 kB / 1.804 GB, free: 196.7 MB / 0.67 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0001626/5.239, allocations: 18.38 kB / 1.804 GB, free: 196.7 MB / 0.67 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0003376/5.24, allocations: 66.05 kB / 1.804 GB, free: 196.7 MB / 0.67 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.2947/5.534, allocations: 68.81 MB / 1.872 GB, free: 172.6 MB / 0.67 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001061/5.534, allocations: 8.781 kB / 1.872 GB, free: 172.6 MB / 0.67 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.01356/5.548, allocations: 2.414 MB / 1.874 GB, free: 171.9 MB / 0.67 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.03032/5.578, allocations: 11.88 MB / 1.886 GB, free: 165 MB / 0.67 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.003531/5.582, allocations: 479.5 kB / 1.886 GB, free: 164.5 MB / 0.67 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.09665/5.678, allocations: 45.72 MB / 1.931 GB, free: 118.6 MB / 0.67 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.398e-06/5.678, allocations: 6.125 kB / 1.931 GB, free: 118.6 MB / 0.67 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.2626/5.941, allocations: 62.61 MB / 1.992 GB, free: 56.43 MB / 0.67 GB Notification: Performance of postOpt removeConstants (simulation): time 0.01099/5.952, allocations: 3.388 MB / 1.995 GB, free: 53.68 MB / 0.67 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.004383/5.956, allocations: 295.9 kB / 1.995 GB, free: 53.39 MB / 0.67 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01124/5.968, allocations: 0.5111 MB / 1.996 GB, free: 52.88 MB / 0.67 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.004074/5.972, allocations: 1.561 MB / 1.997 GB, free: 51.31 MB / 0.67 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.001147/5.973, allocations: 475.6 kB / 1.998 GB, free: 50.84 MB / 0.67 GB Notification: Performance of sorting global known variables: time 0.007281/5.98, allocations: 6.481 MB / 2.004 GB, free: 44.4 MB / 0.67 GB Notification: Performance of sort global known variables: time 1e-07/5.98, allocations: 0 / 2.004 GB, free: 44.4 MB / 0.67 GB Notification: Performance of remove unused functions: time 0.0213/6.001, allocations: 6.708 MB / 2.011 GB, free: 38.15 MB / 0.67 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 15 * Number of states: 60 (solution.temperature,O2_free.logn,H2O.logn,relaxed.OxyHm[1].logn,relaxed.OxyHm[2].logn,relaxed.OxyHm[3].logn,relaxed.OxyHm[4].logn,relaxed.DeoxyHm[1].logn,relaxed.DeoxyHm[2].logn,relaxed.DeoxyHm[3].logn,relaxed.DeoxyHm[4].logn,relaxed.HmAH[1].logn,relaxed.HmAH[2].logn,relaxed.HmAH[3].logn,relaxed.HmAH[4].logn,relaxed.HmA[1].logn,relaxed.HmA[2].logn,relaxed.HmA[3].logn,relaxed.HmA[4].logn,relaxed.HmNH3[1].logn,relaxed.HmNH3[2].logn,relaxed.HmNH3[3].logn,relaxed.HmNH3[4].logn,relaxed.HmNH2[1].logn,relaxed.HmNH2[2].logn,relaxed.HmNH2[3].logn,relaxed.HmNH2[4].logn,relaxed.HmNHCOO[1].logn,relaxed.HmNHCOO[2].logn,relaxed.HmNHCOO[3].logn,relaxed.HmNHCOO[4].logn,tensed.OxyHm[1].logn,tensed.OxyHm[2].logn,tensed.OxyHm[3].logn,tensed.OxyHm[4].logn,tensed.DeoxyHm[1].logn,tensed.DeoxyHm[2].logn,tensed.DeoxyHm[3].logn,tensed.DeoxyHm[4].logn,tensed.HmAH[1].logn,tensed.HmAH[2].logn,tensed.HmAH[3].logn,tensed.HmAH[4].logn,tensed.HmA[1].logn,tensed.HmA[2].logn,tensed.HmA[3].logn,tensed.HmA[4].logn,tensed.HmNH3[1].logn,tensed.HmNH3[2].logn,tensed.HmNH3[3].logn,tensed.HmNH3[4].logn,tensed.HmNH2[1].logn,tensed.HmNH2[2].logn,tensed.HmNH2[3].logn,tensed.HmNH2[4].logn,tensed.HmNHCOO[1].logn,tensed.HmNHCOO[2].logn,tensed.HmNHCOO[3].logn,tensed.HmNHCOO[4].logn,CO2_free.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (1234): * Single equations (assignments): 1231 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of Backend phase and start with SimCode phase: time 0.007106/6.009, allocations: 3.637 MB / 2.014 GB, free: 34.91 MB / 0.67 GB Notification: Performance of simCode: created initialization part: time 0.05352/6.062, allocations: 26.39 MB / 2.04 GB, free: 8.504 MB / 0.67 GB Notification: Performance of simCode: created event and clocks part: time 8.596e-06/6.062, allocations: 0 / 2.04 GB, free: 8.504 MB / 0.67 GB Notification: Performance of simCode: created simulation system equations: time 0.2753/6.337, allocations: 13.61 MB / 2.053 GB, free: 202.8 MB / 0.67 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.01734/6.355, allocations: 2.455 MB / 2.056 GB, free: 202.7 MB / 0.67 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.08979/6.445, allocations: 38.34 MB / 2.093 GB, free: 192.4 MB / 0.67 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.01555/6.46, allocations: 9.62 MB / 2.103 GB, free: 190.2 MB / 0.67 GB Notification: Performance of simCode: alias equations: time 0.0167/6.477, allocations: 5.163 MB / 2.108 GB, free: 190.1 MB / 0.67 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.007097/6.484, allocations: 1.423 MB / 2.109 GB, free: 190 MB / 0.67 GB Notification: Performance of SimCode: time 9.92e-07/6.484, allocations: 0 / 2.109 GB, free: 190 MB / 0.67 GB Notification: Performance of Templates: time 0.5934/7.077, allocations: 345.8 MB / 2.447 GB, free: 101.7 MB / 0.67 GB " [Timeout remaining time 653] make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.makefile [Timeout 660] (rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinCarboxylation.pipe 2>&1) [Timeout 480] [Calling sys.exit(0), Time elapsed: 21.836486213840544] Failed to read output from testmodel.py, exit status != 0: 7.086667284369469 7.095429251 5.874067052 Calling exit ...