Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001384/0.001384, allocations: 89.27 kB / 19.43 MB, free: 1.98 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001608/0.001608, allocations: 168.3 kB / 22.74 MB, free: 4.77 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.47/1.47, allocations: 177.1 MB / 203.1 MB, free: 9.055 MB / 190.1 MB
"
[Timeout remaining time 178]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.138/0.138, allocations: 17.37 MB / 276.9 MB, free: 15.12 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization")
translateModel(Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.693e-06/1.693e-06, allocations: 0 / 352.7 MB, free: 16.05 MB / 286.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.62e-05/2.789e-05, allocations: 2.312 kB / 352.7 MB, free: 16.05 MB / 286.1 MB
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization): time 0.006972/0.007, allocations: 7.425 MB / 360.1 MB, free: 8.59 MB / 286.1 MB
Notification: Performance of NFInst.instExpressions: time 0.02717/0.03417, allocations: 21.31 MB / 381.4 MB, free: 3.199 MB / 302.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001519/0.03569, allocations: 27.75 kB / 381.4 MB, free: 3.168 MB / 302.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.002049/0.03774, allocations: 476.1 kB / 381.9 MB, free: 2.699 MB / 302.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.008057/0.0458, allocations: 2.226 MB / 384.1 MB, free: 468 kB / 302.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.008819/0.05461, allocations: 3.16 MB / 387.3 MB, free: 13.28 MB / 318.1 MB
Notification: Performance of NFFlatten.flatten: time 0.00381/0.05842, allocations: 2.511 MB / 389.8 MB, free: 10.75 MB / 318.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001791/0.06022, allocations: 1.173 MB / 391 MB, free: 9.535 MB / 318.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002199/0.06241, allocations: 1.693 MB / 392.7 MB, free: 7.84 MB / 318.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001869/0.06428, allocations: 1.099 MB / 393.8 MB, free: 6.738 MB / 318.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003621/0.06465, allocations: 212 kB / 394 MB, free: 6.531 MB / 318.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.007508/0.07215, allocations: 2.55 MB / 396.5 MB, free: 3.977 MB / 318.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.0008136/0.07297, allocations: 0.5179 MB / 397.1 MB, free: 3.457 MB / 318.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.001442/0.07441, allocations: 0.7952 MB / 397.8 MB, free: 2.66 MB / 318.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.01184/0.08625, allocations: 5.558 MB / 403.4 MB, free: 13.08 MB / 334.1 MB
Notification: Performance of FrontEnd - DAE generated: time 7.895e-06/0.08626, allocations: 3.984 kB / 403.4 MB, free: 13.07 MB / 334.1 MB
Notification: Performance of FrontEnd: time 1.432e-06/0.08626, allocations: 0 / 403.4 MB, free: 13.07 MB / 334.1 MB
Notification: Performance of Transformations before backend: time 5.692e-05/0.08631, allocations: 3.938 kB / 403.4 MB, free: 13.07 MB / 334.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 446
 * Number of variables: 446
Notification: Performance of Generate backend data structure: time 0.005868/0.09218, allocations: 2.616 MB / 406 MB, free: 10.41 MB / 334.1 MB
Notification: Performance of prepare preOptimizeDAE: time 4.003e-05/0.09222, allocations: 8.031 kB / 406 MB, free: 10.4 MB / 334.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002455/0.09468, allocations: 0.6808 MB / 406.7 MB, free: 9.719 MB / 334.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002311/0.09699, allocations: 0.9286 MB / 407.6 MB, free: 8.758 MB / 334.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002747/0.09726, allocations: 242.9 kB / 407.9 MB, free: 8.496 MB / 334.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0004573/0.09772, allocations: 184.3 kB / 408.1 MB, free: 8.316 MB / 334.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.004203/0.1019, allocations: 2.093 MB / 410.2 MB, free: 6.191 MB / 334.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.826e-05/0.102, allocations: 192 / 410.2 MB, free: 6.191 MB / 334.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0002108/0.1022, allocations: 76.12 kB / 410.2 MB, free: 6.117 MB / 334.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 4.159e-05/0.1022, allocations: 44 kB / 410.3 MB, free: 6.074 MB / 334.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.00489/0.1071, allocations: 2.577 MB / 412.8 MB, free: 3.496 MB / 334.1 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01178/0.1189, allocations: 5.279 MB / 418.1 MB, free: 14.11 MB / 350.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.005242/0.1241, allocations: 2.543 MB / 420.7 MB, free: 11.57 MB / 350.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001763/0.1259, allocations: 0.8353 MB / 421.5 MB, free: 10.73 MB / 350.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.01055/0.1364, allocations: 4.396 MB / 425.9 MB, free: 6.301 MB / 350.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 5.203e-05/0.1365, allocations: 47.88 kB / 425.9 MB, free: 6.246 MB / 350.1 MB
Notification: Performance of pre-optimization done (n=144): time 3.546e-06/0.1365, allocations: 0 / 425.9 MB, free: 6.246 MB / 350.1 MB
Notification: Performance of matching and sorting (n=180): time 0.03392/0.1704, allocations: 6.778 MB / 432.7 MB, free: 15.39 MB / 366.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 8.297e-05/0.1705, allocations: 99.11 kB / 432.8 MB, free: 15.28 MB / 366.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001112/0.1716, allocations: 0.747 MB / 433.6 MB, free: 14.53 MB / 366.1 MB
Notification: Performance of collectPreVariables (initialization): time 0.0002712/0.1719, allocations: 53.7 kB / 433.6 MB, free: 14.47 MB / 366.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0006045/0.1725, allocations: 0.7662 MB / 434.4 MB, free: 13.69 MB / 366.1 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0006895/0.1732, allocations: 0.6313 MB / 435 MB, free: 13.05 MB / 366.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0006362/0.1738, allocations: 355.5 kB / 435.4 MB, free: 12.7 MB / 366.1 MB
Notification: Performance of setup shared object (initialization): time 0.0001928/0.174, allocations: 357.9 kB / 435.7 MB, free: 12.34 MB / 366.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001235/0.1752, allocations: 0.6209 MB / 436.3 MB, free: 11.72 MB / 366.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001679/0.1769, allocations: 1.129 MB / 437.5 MB, free: 10.36 MB / 366.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.00313/0.18, allocations: 1.921 MB / 439.4 MB, free: 8.223 MB / 366.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.111e-05/0.18, allocations: 4 kB / 439.4 MB, free: 8.219 MB / 366.1 MB
Notification: Performance of matching and sorting (n=258) (initialization): time 0.00859/0.1886, allocations: 2.549 MB / 441.9 MB, free: 5.652 MB / 366.1 MB
Notification: Performance of prepare postOptimizeDAE: time 3.291e-05/0.1887, allocations: 13 kB / 442 MB, free: 5.641 MB / 366.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.966e-05/0.1887, allocations: 19.94 kB / 442 MB, free: 5.621 MB / 366.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.004274/0.193, allocations: 482.8 kB / 442.4 MB, free: 5.137 MB / 366.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002731/0.1957, allocations: 0.5266 MB / 443 MB, free: 4.609 MB / 366.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.1537/0.3494, allocations: 7.124 MB / 450.1 MB, free: 93.79 MB / 366.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001488/0.3509, allocations: 62.55 kB / 450.2 MB, free: 93.79 MB / 366.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001824/0.351, allocations: 104.7 kB / 450.3 MB, free: 93.79 MB / 366.1 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 70
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (246):
 * Single equations (assignments): 242
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,3,100.0%), (1,3,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 2 systems
   {(1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.0006575/0.3517, allocations: 371.5 kB / 450.6 MB, free: 93.68 MB / 366.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0004284/0.3521, allocations: 194.9 kB / 450.8 MB, free: 93.68 MB / 366.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.007706/0.3598, allocations: 2.43 MB / 453.2 MB, free: 93.02 MB / 366.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 2.016e-05/0.3599, allocations: 19.53 kB / 453.3 MB, free: 93.02 MB / 366.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.09e-05/0.3599, allocations: 2.75 kB / 453.3 MB, free: 93.02 MB / 366.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 2.178e-05/0.3599, allocations: 9.219 kB / 453.3 MB, free: 93.02 MB / 366.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.009173/0.3691, allocations: 3.613 MB / 456.9 MB, free: 91.46 MB / 366.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 8.125e-06/0.3691, allocations: 1.719 kB / 456.9 MB, free: 91.46 MB / 366.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002027/0.3711, allocations: 389.9 kB / 457.3 MB, free: 91.44 MB / 366.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.003823/0.3749, allocations: 456.8 kB / 457.7 MB, free: 91.35 MB / 366.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001828/0.3751, allocations: 54.17 kB / 457.8 MB, free: 91.33 MB / 366.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.008432/0.3835, allocations: 6.964 MB / 464.7 MB, free: 85.23 MB / 366.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.244e-06/0.3835, allocations: 4 kB / 464.7 MB, free: 85.22 MB / 366.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.007829/0.3914, allocations: 3.191 MB / 467.9 MB, free: 83.89 MB / 366.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0002851/0.3916, allocations: 123.3 kB / 468 MB, free: 83.88 MB / 366.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001917/0.3918, allocations: 34.34 kB / 468.1 MB, free: 83.86 MB / 366.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0008914/0.3927, allocations: 36.81 kB / 468.1 MB, free: 83.84 MB / 366.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003172/0.393, allocations: 149.1 kB / 468.3 MB, free: 83.81 MB / 366.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001174/0.3932, allocations: 67.05 kB / 468.3 MB, free: 83.76 MB / 366.1 MB
Notification: Performance of sorting global known variables: time 0.0004575/0.3936, allocations: 465.5 kB / 468.8 MB, free: 83.37 MB / 366.1 MB
Notification: Performance of sort global known variables: time 8e-08/0.3936, allocations: 0 / 468.8 MB, free: 83.37 MB / 366.1 MB
Notification: Performance of remove unused functions: time 0.002715/0.3963, allocations: 1.077 MB / 469.9 MB, free: 82.48 MB / 366.1 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 8 (solution.temperature,H3O.logn,OH.logn,H2O.logn,solution1.temperature,H_.logn,OH_.logn,H2O_.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (178):
 * Single equations (assignments): 174
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,3,100.0%), (1,3,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 2 systems
   {(1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.001768/0.3981, allocations: 1.215 MB / 471.1 MB, free: 81.74 MB / 366.1 MB
Notification: Performance of simCode: created initialization part: time 0.002982/0.4011, allocations: 2.139 MB / 473.2 MB, free: 79.76 MB / 366.1 MB
Notification: Performance of simCode: created event and clocks part: time 2.675e-06/0.4011, allocations: 0 / 473.2 MB, free: 79.76 MB / 366.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.001583/0.4027, allocations: 1.319 MB / 474.5 MB, free: 78.47 MB / 366.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001353/0.404, allocations: 347.7 kB / 474.9 MB, free: 78.16 MB / 366.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004273/0.4083, allocations: 3.093 MB / 478 MB, free: 75.09 MB / 366.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0004857/0.4088, allocations: 0.6969 MB / 478.7 MB, free: 74.36 MB / 366.1 MB
Notification: Performance of simCode: alias equations: time 0.001125/0.4099, allocations: 345.4 kB / 479 MB, free: 74.04 MB / 366.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004818/0.4104, allocations: 245.2 kB / 479.2 MB, free: 73.8 MB / 366.1 MB
Notification: Performance of SimCode: time 9.72e-07/0.4104, allocations: 0 / 479.2 MB, free: 73.8 MB / 366.1 MB
Notification: Performance of Templates: time 0.04528/0.4557, allocations: 38.33 MB / 0.5054 GB, free: 35.79 MB / 366.1 MB
"
[Timeout remaining time 660]
make -j1 -f Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization.sim & ./Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.AcidBase.WaterSelfIonization.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 6.44748555496335]