Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001132/0.001132, allocations: 92.22 kB / 19.65 MB, free: 276 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001225/0.001225, allocations: 173 kB / 23.02 MB, free: 1.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.008/1.008, allocations: 177.1 MB / 203.4 MB, free: 5.633 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.05582/0.05582, allocations: 12.76 MB / 272.7 MB, free: 276 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC")
translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.583e-06/1.583e-06, allocations: 0 / 346.8 MB, free: 1.098 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.82e-05/2.979e-05, allocations: 6.25 kB / 346.8 MB, free: 1.09 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC): time 0.007902/0.007932, allocations: 10.59 MB / 357.4 MB, free: 6.461 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01342/0.02136, allocations: 11.4 MB / 368.8 MB, free: 11.02 MB / 298.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001833/0.02319, allocations: 106.9 kB / 368.9 MB, free: 10.92 MB / 298.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0008683/0.02406, allocations: 408 kB / 369.3 MB, free: 10.52 MB / 298.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.005367/0.02942, allocations: 2.19 MB / 371.5 MB, free: 8.312 MB / 298.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.004131/0.03356, allocations: 2.002 MB / 373.5 MB, free: 6.305 MB / 298.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003472/0.03703, allocations: 2.88 MB / 376.4 MB, free: 3.41 MB / 298.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0007313/0.03776, allocations: 384.1 kB / 376.8 MB, free: 3.008 MB / 298.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002708/0.04047, allocations: 1.379 MB / 378.2 MB, free: 1.621 MB / 298.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002703/0.04317, allocations: 1.235 MB / 379.4 MB, free: 392 kB / 298.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0007938/0.04396, allocations: 148 kB / 379.5 MB, free: 244 kB / 298.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0007121/0.04468, allocations: 160 kB / 379.7 MB, free: 84 kB / 298.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0006389/0.04531, allocations: 0.5371 MB / 380.2 MB, free: 15.54 MB / 314.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001645/0.04696, allocations: 0.7051 MB / 380.9 MB, free: 14.83 MB / 314.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.003605/0.05056, allocations: 1.864 MB / 382.8 MB, free: 12.96 MB / 314.7 MB
Notification: Performance of FrontEnd - DAE generated: time 6.342e-06/0.05057, allocations: 0 / 382.8 MB, free: 12.96 MB / 314.7 MB
Notification: Performance of FrontEnd: time 1.764e-06/0.05057, allocations: 0 / 382.8 MB, free: 12.96 MB / 314.7 MB
Notification: Performance of Transformations before backend: time 0.0001185/0.05069, allocations: 0 / 382.8 MB, free: 12.96 MB / 314.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 287
 * Number of variables: 287
Notification: Performance of Generate backend data structure: time 0.005708/0.0564, allocations: 2.594 MB / 385.4 MB, free: 10.32 MB / 314.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.301e-05/0.05644, allocations: 11.98 kB / 385.4 MB, free: 10.3 MB / 314.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001175/0.05762, allocations: 431.3 kB / 385.8 MB, free: 9.883 MB / 314.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.003207/0.06082, allocations: 1.311 MB / 387.1 MB, free: 8.531 MB / 314.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 9.128e-05/0.06091, allocations: 90.64 kB / 387.2 MB, free: 8.441 MB / 314.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001851/0.0611, allocations: 116.4 kB / 387.3 MB, free: 8.328 MB / 314.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001695/0.06279, allocations: 0.8671 MB / 388.2 MB, free: 7.414 MB / 314.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.647e-05/0.06282, allocations: 3.938 kB / 388.2 MB, free: 7.41 MB / 314.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001075/0.06293, allocations: 48 kB / 388.3 MB, free: 7.363 MB / 314.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.048e-05/0.06296, allocations: 28 kB / 388.3 MB, free: 7.336 MB / 314.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001301/0.06426, allocations: 479.3 kB / 388.8 MB, free: 6.855 MB / 314.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.007198/0.07146, allocations: 3.169 MB / 391.9 MB, free: 3.621 MB / 314.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001047/0.07251, allocations: 486 kB / 392.4 MB, free: 3.121 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0005695/0.07307, allocations: 249.3 kB / 392.6 MB, free: 2.867 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 6.433e-05/0.07314, allocations: 24.94 kB / 392.7 MB, free: 2.844 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.81e-05/0.07318, allocations: 50.38 kB / 392.7 MB, free: 2.785 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=98): time 4.198e-06/0.07318, allocations: 0 / 392.7 MB, free: 2.785 MB / 314.7 MB
Notification: Performance of matching and sorting (n=161): time 0.03014/0.1033, allocations: 7.728 MB / 400.4 MB, free: 11.02 MB / 330.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.015e-05/0.1034, allocations: 94.42 kB / 400.5 MB, free: 10.91 MB / 330.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001295/0.1047, allocations: 1.526 MB / 402.1 MB, free: 9.34 MB / 330.7 MB
Notification: Performance of collectPreVariables (initialization): time 9.574e-05/0.1048, allocations: 53.7 kB / 402.1 MB, free: 9.281 MB / 330.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0004856/0.1052, allocations: 0.9391 MB / 403 MB, free: 8.328 MB / 330.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0003481/0.1056, allocations: 0.5733 MB / 403.6 MB, free: 7.75 MB / 330.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003806/0.106, allocations: 349 kB / 404 MB, free: 7.402 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001101/0.1061, allocations: 480.7 kB / 404.4 MB, free: 6.93 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0005925/0.1067, allocations: 311.8 kB / 404.7 MB, free: 6.625 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0008176/0.1075, allocations: 0.8938 MB / 405.6 MB, free: 5.508 MB / 330.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001552/0.109, allocations: 1.356 MB / 407 MB, free: 3.934 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.375e-06/0.1091, allocations: 4 kB / 407 MB, free: 3.93 MB / 330.7 MB
Notification: Performance of matching and sorting (n=236) (initialization): time 0.008311/0.1174, allocations: 3.146 MB / 410.1 MB, free: 0.7617 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.914e-05/0.1174, allocations: 12 kB / 410.1 MB, free: 0.75 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.006e-05/0.1174, allocations: 12 kB / 410.2 MB, free: 0.7383 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.147/0.2644, allocations: 2.918 MB / 413.1 MB, free: 64.35 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0006716/0.2651, allocations: 236.5 kB / 413.3 MB, free: 64.35 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.01732/0.2824, allocations: 10.96 MB / 424.3 MB, free: 60.09 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001052/0.2835, allocations: 75.86 kB / 424.3 MB, free: 60.06 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 8.786e-05/0.2836, allocations: 76.72 kB / 424.4 MB, free: 60.04 MB / 330.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 52
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (120):
 * Single equations (assignments): 118
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(3,56,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of prepare postOptimizeDAE: time 0.000369/0.2839, allocations: 252.6 kB / 424.7 MB, free: 59.83 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002512/0.2842, allocations: 277.8 kB / 424.9 MB, free: 59.71 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0002686/0.2845, allocations: 328 kB / 425.3 MB, free: 59.46 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 7.103e-06/0.2845, allocations: 17.69 kB / 425.3 MB, free: 59.46 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 2.868e-05/0.2845, allocations: 7.75 kB / 425.3 MB, free: 59.46 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 9.358e-06/0.2845, allocations: 11.95 kB / 425.3 MB, free: 59.46 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001252/0.2858, allocations: 1.172 MB / 426.5 MB, free: 58.94 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 7.995e-06/0.2858, allocations: 1.594 kB / 426.5 MB, free: 58.94 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0002297/0.286, allocations: 96.44 kB / 426.6 MB, free: 58.93 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.009693/0.2957, allocations: 2.767 MB / 429.3 MB, free: 58.62 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001858/0.2959, allocations: 31.38 kB / 429.4 MB, free: 58.61 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.01466/0.3105, allocations: 10.87 MB / 440.2 MB, free: 48.36 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.703e-06/0.3105, allocations: 0 / 440.2 MB, free: 48.36 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.009788/0.3203, allocations: 3.383 MB / 443.6 MB, free: 45.02 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.001012/0.3213, allocations: 424.3 kB / 444 MB, free: 44.61 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002227/0.3216, allocations: 32.03 kB / 444.1 MB, free: 44.58 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0008246/0.3224, allocations: 43.94 kB / 444.1 MB, free: 44.54 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0005953/0.323, allocations: 152.9 kB / 444.2 MB, free: 44.39 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 8.932e-05/0.3231, allocations: 36 kB / 444.3 MB, free: 44.35 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0009232/0.324, allocations: 0.9007 MB / 445.2 MB, free: 43.43 MB / 330.7 MB
Notification: Performance of sort global known variables: time 4.01e-07/0.324, allocations: 0 / 445.2 MB, free: 43.43 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.002145/0.3261, allocations: 0.9141 MB / 446.1 MB, free: 42.52 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 1 (hemoglobinConservationLaw.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (45):
 * Single equations (assignments): 43
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(6,53,86.1%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0002322/0.3264, allocations: 129.1 kB / 446.2 MB, free: 42.38 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.005271/0.3316, allocations: 2.403 MB / 448.6 MB, free: 39.98 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 3.397e-06/0.3316, allocations: 0 / 448.6 MB, free: 39.98 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.004295/0.3359, allocations: 1.918 MB / 450.5 MB, free: 38.04 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001757/0.3377, allocations: 341.2 kB / 450.9 MB, free: 37.73 MB / 330.7 MB
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Error: Error parsing unit %: Parse error
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.006118/0.3438, allocations: 3.378 MB / 454.3 MB, free: 34.34 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0004755/0.3443, allocations: 0.4998 MB / 454.8 MB, free: 33.81 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0004979/0.3448, allocations: 144.5 kB / 454.9 MB, free: 33.67 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.000179/0.345, allocations: 92.48 kB / 455 MB, free: 33.58 MB / 330.7 MB
Notification: Performance of SimCode: time 2.084e-06/0.345, allocations: 0 / 455 MB, free: 33.58 MB / 330.7 MB
Notification: Performance of Templates: time 0.07763/0.4226, allocations: 72.06 MB / 0.5147 GB, free: 9.727 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.sim & ./Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 5.372137839905918]