Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false) Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel") translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.005557/0.005557, allocations: 101.3 kB / 15.73 MB, free: 6.469 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001066/0.001066, allocations: 193.5 kB / 16.67 MB, free: 6.379 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.347/1.347, allocations: 222.9 MB / 240.4 MB, free: 4.332 MB / 190.1 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.1984/0.1984, allocations: 12.28 MB / 302.8 MB, free: 1.258 MB / 238.1 MB Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl" Notification: Performance of FrontEnd - loaded program: time 0.001249/0.001249, allocations: 55.91 kB / 419.2 MB, free: 4.336 MB / 350.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.2781/0.2794, allocations: 52.08 MB / 471.3 MB, free: 16.61 MB / 350.1 MB Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.01002/0.2894, allocations: 8.732 MB / 480 MB, free: 10.81 MB / 350.1 MB Notification: Performance of NFInst.instExpressions: time 0.004888/0.2944, allocations: 2.373 MB / 482.4 MB, free: 8.734 MB / 350.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.001644/0.296, allocations: 113.5 kB / 482.5 MB, free: 8.734 MB / 350.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0009068/0.2969, allocations: 376.6 kB / 482.9 MB, free: 8.398 MB / 350.1 MB Notification: Performance of NFTyping.typeBindings: time 0.00132/0.2983, allocations: 0.5225 MB / 483.4 MB, free: 7.93 MB / 350.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.001217/0.2995, allocations: 0.5795 MB / 484 MB, free: 7.391 MB / 350.1 MB Notification: Performance of NFFlatten.flatten: time 0.002943/0.3025, allocations: 2.332 MB / 486.3 MB, free: 5.926 MB / 350.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001768/0.3043, allocations: 1.289 MB / 487.6 MB, free: 5.16 MB / 350.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.001402/0.3057, allocations: 0.9467 MB / 488.5 MB, free: 4.555 MB / 350.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.001194/0.3069, allocations: 1.084 MB / 489.6 MB, free: 3.723 MB / 350.1 MB Notification: Performance of NFPackage.collectConstants: time 0.000439/0.3073, allocations: 316.7 kB / 489.9 MB, free: 3.723 MB / 350.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0005265/0.3079, allocations: 317.5 kB / 490.2 MB, free: 3.723 MB / 350.1 MB Notification: Performance of NFScalarize.scalarize: time 0.0003938/0.3083, allocations: 0.5816 MB / 490.8 MB, free: 3.203 MB / 350.1 MB Notification: Performance of NFVerifyModel.verify: time 0.001081/0.3094, allocations: 1.255 MB / 492.1 MB, free: 2.281 MB / 350.1 MB Notification: Performance of NFConvertDAE.convert: time 0.002674/0.312, allocations: 3.428 MB / 495.5 MB, free: 15.55 MB / 366.1 MB Notification: Performance of FrontEnd - DAE generated: time 8.987e-06/0.3121, allocations: 4 kB / 495.5 MB, free: 15.54 MB / 366.1 MB Notification: Performance of FrontEnd: time 3.586e-06/0.3121, allocations: 0 / 495.5 MB, free: 15.54 MB / 366.1 MB Notification: Performance of Transformations before backend: time 3.668e-05/0.3121, allocations: 5.75 kB / 495.5 MB, free: 15.54 MB / 366.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 687 * Number of variables: 687 Notification: Performance of Generate backend data structure: time 0.004046/0.3162, allocations: 2.352 MB / 497.9 MB, free: 13.68 MB / 366.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.157e-05/0.3162, allocations: 8.031 kB / 497.9 MB, free: 13.67 MB / 366.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0003582/0.3166, allocations: 238.1 kB / 498.1 MB, free: 13.44 MB / 366.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0004396/0.317, allocations: 421.1 kB / 498.5 MB, free: 12.99 MB / 366.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000251/0.3173, allocations: 253.4 kB / 498.8 MB, free: 12.73 MB / 366.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003087/0.3176, allocations: 284.1 kB / 499 MB, free: 12.45 MB / 366.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.003876/0.3215, allocations: 2.393 MB / 0.4897 GB, free: 9.973 MB / 366.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 5.905e-05/0.3216, allocations: 7.906 kB / 0.4897 GB, free: 9.965 MB / 366.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001749/0.3218, allocations: 108 kB / 0.4898 GB, free: 9.859 MB / 366.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 4.813e-05/0.3218, allocations: 68 kB / 0.4899 GB, free: 9.793 MB / 366.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002919/0.3247, allocations: 1.683 MB / 0.4915 GB, free: 8.098 MB / 366.1 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0116/0.3363, allocations: 8.345 MB / 0.4997 GB, free: 15.44 MB / 382.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.00215/0.3385, allocations: 1.583 MB / 0.5012 GB, free: 13.74 MB / 382.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.0008703/0.3394, allocations: 0.5493 MB / 0.5017 GB, free: 13.18 MB / 382.1 MB Notification: Performance of preOpt evalFunc (simulation): time 6.32e-05/0.3395, allocations: 17.31 kB / 0.5018 GB, free: 13.16 MB / 382.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.662e-05/0.3395, allocations: 55.81 kB / 0.5018 GB, free: 13.1 MB / 382.1 MB Notification: Performance of pre-optimization done (n=139): time 3.416e-06/0.3395, allocations: 0 / 0.5018 GB, free: 13.1 MB / 382.1 MB Notification: Performance of matching and sorting (n=171): time 0.02451/0.364, allocations: 9.132 MB / 0.5107 GB, free: 3.898 MB / 382.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 9.382e-05/0.3642, allocations: 175.6 kB / 0.5109 GB, free: 3.691 MB / 382.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0005586/0.3647, allocations: 485.7 kB / 0.5114 GB, free: 3.211 MB / 382.1 MB Notification: Performance of collectPreVariables (initialization): time 7.635e-05/0.3648, allocations: 53.7 kB / 0.5114 GB, free: 3.152 MB / 382.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0005221/0.3653, allocations: 0.9448 MB / 0.5123 GB, free: 2.191 MB / 382.1 MB Notification: Performance of collectInitialBindings (initialization): time 0.000453/0.3658, allocations: 0.6277 MB / 0.5129 GB, free: 1.555 MB / 382.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004433/0.3663, allocations: 348 kB / 0.5133 GB, free: 1.211 MB / 382.1 MB Notification: Performance of setup shared object (initialization): time 0.0001234/0.3664, allocations: 329.9 kB / 0.5136 GB, free: 0.8828 MB / 382.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.001127/0.3675, allocations: 0.6693 MB / 0.5142 GB, free: 212 kB / 382.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.001419/0.3689, allocations: 1.184 MB / 0.5154 GB, free: 14.75 MB / 398.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.01485/0.3838, allocations: 4.724 MB / 0.52 GB, free: 9.762 MB / 398.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.512e-05/0.3839, allocations: 8 kB / 0.52 GB, free: 9.754 MB / 398.1 MB Notification: Performance of matching and sorting (n=291) (initialization): time 0.003497/0.3874, allocations: 2.106 MB / 0.5221 GB, free: 7.641 MB / 398.1 MB Notification: Performance of prepare postOptimizeDAE: time 3.784e-05/0.3874, allocations: 19.94 kB / 0.5221 GB, free: 7.621 MB / 398.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.002e-05/0.3875, allocations: 16 kB / 0.5221 GB, free: 7.605 MB / 398.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 4.283e-05/0.3875, allocations: 32 kB / 0.5221 GB, free: 7.574 MB / 398.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002383/0.3899, allocations: 0.6399 MB / 0.5228 GB, free: 6.934 MB / 398.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 4.203e-05/0.39, allocations: 43.86 kB / 0.5228 GB, free: 6.891 MB / 398.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0009287/0.3909, allocations: 83.81 kB / 0.5229 GB, free: 6.809 MB / 398.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001411/0.391, allocations: 100 kB / 0.523 GB, free: 6.711 MB / 398.1 MB Warning: Assuming fixed start value for the following 41 variables: V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = 0.0 start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.I_po.c:VARIABLE(min = 0.0 start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real BetaCell.Y.c:VARIABLE(min = 0.0 start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = 0.0 start = 2.34e12 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = 0.0 start = 1.61e10 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = 0.0 start = 1.68e7 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = 0.0 start = 5.8e8 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true ) type: Real PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 86 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (291): * Single equations (assignments): 291 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.001347/0.3924, allocations: 0.6114 MB / 0.5236 GB, free: 6.121 MB / 398.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002554/0.3927, allocations: 98.81 kB / 0.5237 GB, free: 6.023 MB / 398.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002498/0.3952, allocations: 1.428 MB / 0.5251 GB, free: 4.59 MB / 398.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.641e-05/0.3952, allocations: 20 kB / 0.5251 GB, free: 4.57 MB / 398.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 8.617e-06/0.3952, allocations: 4 kB / 0.5251 GB, free: 4.566 MB / 398.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.85e-05/0.3952, allocations: 7.969 kB / 0.5251 GB, free: 4.559 MB / 398.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.006316/0.4016, allocations: 3.573 MB / 0.5286 GB, free: 0.9141 MB / 398.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.115e-05/0.4016, allocations: 7.984 kB / 0.5286 GB, free: 0.9062 MB / 398.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.00236/0.404, allocations: 475.4 kB / 0.529 GB, free: 452 kB / 398.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 2.252e-05/0.404, allocations: 11.98 kB / 0.5291 GB, free: 440 kB / 398.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.000144/0.4042, allocations: 63.91 kB / 0.5291 GB, free: 376 kB / 398.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 8.476e-06/0.4042, allocations: 8 kB / 0.5291 GB, free: 368 kB / 398.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 5.57e-06/0.4042, allocations: 7.938 kB / 0.5291 GB, free: 360 kB / 398.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003509/0.4077, allocations: 2.502 MB / 0.5316 GB, free: 13.82 MB / 414.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0003086/0.408, allocations: 155.9 kB / 0.5317 GB, free: 13.65 MB / 414.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001528/0.4082, allocations: 47.94 kB / 0.5318 GB, free: 13.61 MB / 414.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0007134/0.4089, allocations: 47.97 kB / 0.5318 GB, free: 13.56 MB / 414.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001819/0.4091, allocations: 109.1 kB / 0.5319 GB, free: 13.45 MB / 414.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 8.323e-05/0.4092, allocations: 51.97 kB / 0.532 GB, free: 13.4 MB / 414.1 MB Notification: Performance of sorting global known variables: time 0.0003296/0.4095, allocations: 298.9 kB / 0.5323 GB, free: 13.11 MB / 414.1 MB Notification: Performance of sort global known variables: time 1.4e-07/0.4095, allocations: 0 / 0.5323 GB, free: 13.11 MB / 414.1 MB Notification: Performance of remove unused functions: time 0.001417/0.4109, allocations: 428 kB / 0.5327 GB, free: 12.69 MB / 414.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 7 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (173): * Single equations (assignments): 173 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0002142/0.4112, allocations: 164.8 kB / 0.5328 GB, free: 12.52 MB / 414.1 MB Notification: Performance of simCode: created initialization part: time 0.002812/0.414, allocations: 1.656 MB / 0.5344 GB, free: 10.87 MB / 414.1 MB Notification: Performance of simCode: created event and clocks part: time 3.447e-06/0.414, allocations: 0 / 0.5344 GB, free: 10.87 MB / 414.1 MB Notification: Performance of simCode: created simulation system equations: time 0.001132/0.4151, allocations: 0.7491 MB / 0.5352 GB, free: 10.12 MB / 414.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001215/0.4164, allocations: 228.3 kB / 0.5354 GB, free: 9.895 MB / 414.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.007284/0.4237, allocations: 4.846 MB / 0.5401 GB, free: 5 MB / 414.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.000928/0.4246, allocations: 1.366 MB / 0.5415 GB, free: 3.598 MB / 414.1 MB Notification: Performance of simCode: alias equations: time 0.0008582/0.4255, allocations: 161.5 kB / 0.5416 GB, free: 3.438 MB / 414.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003593/0.4259, allocations: 111.4 kB / 0.5417 GB, free: 3.328 MB / 414.1 MB Notification: Performance of SimCode: time 1.092e-06/0.4259, allocations: 0 / 0.5417 GB, free: 3.328 MB / 414.1 MB Notification: Performance of Templates: time 0.02714/0.453, allocations: 16.06 MB / 0.5574 GB, free: 3.406 MB / 430.1 MB make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile (rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel -abortSlowSimulation -alarm=480 -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)