Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0006386/0.0006386, allocations: 72.27 kB / 9.851 MB, free: 0.8477 MB / 10.45 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.0008354/0.001474, allocations: 447.7 kB / 10.29 MB, free: 420 kB / 10.45 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0006728/0.0006728, allocations: 149.9 kB / 11.17 MB, free: 3.008 MB / 13.93 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.0008481/0.001521, allocations: 480.2 kB / 11.64 MB, free: 2.535 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9123/0.9123, allocations: 177.1 MB / 189.5 MB, free: 3.793 MB / 186.7 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.1484/1.061, allocations: 53.66 MB / 243.2 MB, free: 2.375 MB / 234.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/package.mo): time 0.1002/0.1002, allocations: 17.44 MB / 261.4 MB, free: 244 kB / 250.7 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.01058/0.1108, allocations: 6.963 MB / 268.3 MB, free: 9.262 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: setCommandLineOptions("--fmiFlags=s:cvode")
Running command: "" <> buildModelFMU(Chemical.Examples.debug.EnzymeKinetics2_,fileNamePrefix="Chemical_master_Chemical_Examples_debug_EnzymeKinetics2_",fmuType="me_cs",version="2.0+3.0",platforms={"static"})
"" <> buildModelFMU(Chemical.Examples.debug.EnzymeKinetics2_,fileNamePrefix="Chemical_master_Chemical_Examples_debug_EnzymeKinetics2_",fmuType="me_cs",version="2.0+3.0",platforms={"static"}) [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.152e-06/1.152e-06, allocations: 0 / 269.6 MB, free: 8.027 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 6.642e-06/7.794e-06, allocations: 2.312 kB / 269.6 MB, free: 8.023 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.01858/0.01859, allocations: 12.25 MB / 281.8 MB, free: 11.71 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01659/0.03518, allocations: 11.2 MB / 293 MB, free: 472 kB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.002263/0.03744, allocations: 83.31 kB / 293.1 MB, free: 388 kB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.004412/0.04185, allocations: 2.032 MB / 295.1 MB, free: 14.33 MB / 298.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.004019/0.04587, allocations: 1.532 MB / 296.7 MB, free: 12.79 MB / 298.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.006762/0.05263, allocations: 4.309 MB / 301 MB, free: 8.461 MB / 298.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.004984/0.05762, allocations: 3.644 MB / 304.6 MB, free: 4.809 MB / 298.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0008875/0.05851, allocations: 0.5701 MB / 305.2 MB, free: 4.176 MB / 298.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.003189/0.0617, allocations: 2.168 MB / 307.3 MB, free: 1.992 MB / 298.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002121/0.06382, allocations: 1.574 MB / 308.9 MB, free: 424 kB / 298.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0004998/0.06432, allocations: 312 kB / 309.2 MB, free: 112 kB / 298.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.004429/0.06875, allocations: 2.063 MB / 311.3 MB, free: 14.04 MB / 314.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0008657/0.06961, allocations: 0.9346 MB / 312.2 MB, free: 13.11 MB / 314.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.001321/0.07093, allocations: 0.9742 MB / 313.2 MB, free: 12.13 MB / 314.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.006769/0.0777, allocations: 4.473 MB / 317.7 MB, free: 7.641 MB / 314.7 MB
Notification: Performance of FrontEnd - DAE generated: time 1.264e-05/0.07771, allocations: 4 kB / 317.7 MB, free: 7.637 MB / 314.7 MB
Notification: Performance of FrontEnd: time 1.022e-06/0.07771, allocations: 0 / 317.7 MB, free: 7.637 MB / 314.7 MB
Notification: Performance of Transformations before backend: time 8.824e-05/0.0778, allocations: 0 / 317.7 MB, free: 7.637 MB / 314.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.005834/0.08364, allocations: 4.186 MB / 321.9 MB, free: 3.383 MB / 314.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.293e-05/0.08368, allocations: 12.03 kB / 321.9 MB, free: 3.371 MB / 314.7 MB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0004336/0.08411, allocations: 498.2 kB / 322.4 MB, free: 2.875 MB / 314.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002411/0.08652, allocations: 1.574 MB / 323.9 MB, free: 1.301 MB / 314.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1234/0.21, allocations: 1.337 MB / 325.3 MB, free: 25.16 MB / 314.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002977/0.2103, allocations: 0.4999 MB / 325.8 MB, free: 24.84 MB / 314.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003927/0.2107, allocations: 295.5 kB / 326.1 MB, free: 24.84 MB / 314.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003789/0.2144, allocations: 3.811 MB / 329.9 MB, free: 24.56 MB / 314.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.778e-05/0.2145, allocations: 2.578 kB / 329.9 MB, free: 24.56 MB / 314.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001202/0.2146, allocations: 116.5 kB / 330 MB, free: 24.56 MB / 314.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003122/0.2149, allocations: 469.6 kB / 330.4 MB, free: 24.55 MB / 314.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.003162/0.2181, allocations: 4.538 MB / 335 MB, free: 24.46 MB / 314.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0109/0.229, allocations: 12.53 MB / 347.5 MB, free: 19.34 MB / 314.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001002/0.23, allocations: 1.005 MB / 348.5 MB, free: 18.42 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0005845/0.2306, allocations: 0.5729 MB / 349.1 MB, free: 17.88 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.006609/0.2372, allocations: 7.709 MB / 356.8 MB, free: 11.32 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.258e-05/0.2372, allocations: 45.84 kB / 356.8 MB, free: 11.26 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=188): time 2.365e-06/0.2372, allocations: 0 / 356.8 MB, free: 11.26 MB / 314.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 1.7502371072769165]