Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.centralMetabolism.extra_cellular.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0008554/0.0008554, allocations: 76.16 kB / 9.861 MB, free: 0.8281 MB / 10.45 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.002973/0.003828, allocations: 443.8 kB / 10.29 MB, free: 404 kB / 10.45 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0008967/0.0008967, allocations: 141.2 kB / 11.17 MB, free: 3 MB / 13.93 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.001151/0.002048, allocations: 475.6 kB / 11.64 MB, free: 2.531 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9966/0.9966, allocations: 177.2 MB / 189.5 MB, free: 5.324 MB / 186.7 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.08851/1.085, allocations: 53.66 MB / 243.2 MB, free: 15.59 MB / 250.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo): time 0.07901/0.07901, allocations: 9.542 MB / 253.5 MB, free: 5.762 MB / 250.7 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.01796/0.09697, allocations: 3.221 MB / 256.7 MB, free: 2.527 MB / 250.7 MB
"
[Timeout remaining time 180]
Using package BioChem with version 1.1.3 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: setCommandLineOptions("--fmiFlags=s:cvode")
Running command: "" <> buildModelFMU(BioChem.Examples.centralMetabolism.extra_cellular,fileNamePrefix="BioChem_BioChem_Examples_centralMetabolism_extra_cellular",fmuType="me_cs",version="2.0+3.0",platforms={"static"})
"" <> buildModelFMU(BioChem.Examples.centralMetabolism.extra_cellular,fileNamePrefix="BioChem_BioChem_Examples_centralMetabolism_extra_cellular",fmuType="me_cs",version="2.0+3.0",platforms={"static"}) [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.523e-06/1.523e-06, allocations: 0 / 258.1 MB, free: 1.164 MB / 250.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.78e-05/1.933e-05, allocations: 2.312 kB / 258.1 MB, free: 1.16 MB / 250.7 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.centralMetabolism.extra_cellular): time 0.007742/0.007761, allocations: 5.443 MB / 263.5 MB, free: 11.7 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.003542/0.0113, allocations: 1.375 MB / 264.9 MB, free: 10.32 MB / 266.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0007659/0.01207, allocations: 52 kB / 264.9 MB, free: 10.27 MB / 266.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0005473/0.01262, allocations: 198.3 kB / 265.1 MB, free: 10.07 MB / 266.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.000925/0.01354, allocations: 348.6 kB / 265.5 MB, free: 9.73 MB / 266.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.000703/0.01424, allocations: 355.5 kB / 265.8 MB, free: 9.383 MB / 266.7 MB
Notification: Performance of NFFlatten.flatten: time 0.001563/0.01581, allocations: 1.472 MB / 267.3 MB, free: 7.906 MB / 266.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.000739/0.01655, allocations: 448.8 kB / 267.7 MB, free: 7.438 MB / 266.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001159/0.01771, allocations: 0.9604 MB / 268.7 MB, free: 6.473 MB / 266.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0007652/0.01847, allocations: 0.5064 MB / 269.2 MB, free: 5.965 MB / 266.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002588/0.01873, allocations: 191.9 kB / 269.4 MB, free: 5.777 MB / 266.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002256/0.01895, allocations: 192 kB / 269.6 MB, free: 5.59 MB / 266.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0002621/0.01922, allocations: 279.2 kB / 269.8 MB, free: 5.316 MB / 266.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0004961/0.01971, allocations: 431.2 kB / 270.2 MB, free: 4.895 MB / 266.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001375/0.02109, allocations: 0.9889 MB / 271.2 MB, free: 3.902 MB / 266.7 MB
Notification: Performance of FrontEnd - DAE generated: time 1.409e-05/0.0211, allocations: 0 / 271.2 MB, free: 3.902 MB / 266.7 MB
Notification: Performance of FrontEnd: time 1.182e-06/0.0211, allocations: 0 / 271.2 MB, free: 3.902 MB / 266.7 MB
Notification: Performance of Transformations before backend: time 2.846e-05/0.02113, allocations: 3.938 kB / 271.2 MB, free: 3.898 MB / 266.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 353
 * Number of variables: 353
Notification: Performance of Generate backend data structure: time 0.002058/0.02319, allocations: 1.737 MB / 273 MB, free: 2.129 MB / 266.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.75e-05/0.02324, allocations: 11.89 kB / 273 MB, free: 2.117 MB / 266.7 MB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0001645/0.0234, allocations: 214.8 kB / 273.2 MB, free: 1.898 MB / 266.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0002114/0.02361, allocations: 204.8 kB / 273.4 MB, free: 1.699 MB / 266.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0004426/0.02406, allocations: 308.6 kB / 273.7 MB, free: 1.367 MB / 266.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 5.397e-05/0.02411, allocations: 103.2 kB / 273.8 MB, free: 1.266 MB / 266.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001174/0.02423, allocations: 148.3 kB / 273.9 MB, free: 1.121 MB / 266.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0008945/0.02512, allocations: 0.9207 MB / 274.9 MB, free: 172 kB / 266.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.829e-05/0.02515, allocations: 4.141 kB / 274.9 MB, free: 168 kB / 266.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 5.776e-05/0.02521, allocations: 56.38 kB / 274.9 MB, free: 112 kB / 266.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.971e-05/0.02523, allocations: 40.12 kB / 275 MB, free: 72 kB / 266.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1139/0.1391, allocations: 360.7 kB / 275.3 MB, free: 14.96 MB / 266.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.004009/0.1431, allocations: 3.131 MB / 278.4 MB, free: 14.1 MB / 266.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0007261/0.1439, allocations: 0.6535 MB / 279.1 MB, free: 14.05 MB / 266.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0002315/0.1441, allocations: 216.6 kB / 279.3 MB, free: 14.04 MB / 266.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 4.356e-05/0.1441, allocations: 17.91 kB / 279.3 MB, free: 14.03 MB / 266.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.197e-05/0.1442, allocations: 41.42 kB / 279.4 MB, free: 13.99 MB / 266.7 MB
Notification: Performance of pre-optimization done (n=96): time 3.577e-06/0.1442, allocations: 0 / 279.4 MB, free: 13.99 MB / 266.7 MB
Notification: Performance of matching and sorting (n=114): time 0.004358/0.1485, allocations: 2.824 MB / 282.2 MB, free: 13.5 MB / 266.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 2.193e-05/0.1486, allocations: 65.83 kB / 282.3 MB, free: 13.44 MB / 266.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002128/0.1488, allocations: 362.9 kB / 282.6 MB, free: 13.29 MB / 266.7 MB
Notification: Performance of collectPreVariables (initialization): time 3.569e-05/0.1488, allocations: 45.17 kB / 282.7 MB, free: 13.25 MB / 266.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0001563/0.149, allocations: 0.5028 MB / 283.2 MB, free: 12.87 MB / 266.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0001719/0.1491, allocations: 433.6 kB / 283.6 MB, free: 12.55 MB / 266.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001939/0.1493, allocations: 206.1 kB / 283.8 MB, free: 12.47 MB / 266.7 MB
Notification: Performance of setup shared object (initialization): time 8.609e-05/0.1494, allocations: 388.6 kB / 284.2 MB, free: 12.16 MB / 266.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0001874/0.1496, allocations: 146 kB / 284.3 MB, free: 12.16 MB / 266.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.000271/0.1499, allocations: 432.5 kB / 284.7 MB, free: 11.86 MB / 266.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0008198/0.1507, allocations: 0.9349 MB / 285.7 MB, free: 11.51 MB / 266.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 5.23e-06/0.1507, allocations: 4.094 kB / 285.7 MB, free: 11.51 MB / 266.7 MB
Notification: Performance of matching and sorting (n=165) (initialization): time 0.0008704/0.1516, allocations: 0.7637 MB / 286.4 MB, free: 11.35 MB / 266.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.105e-05/0.1516, allocations: 9.812 kB / 286.4 MB, free: 11.35 MB / 266.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.16e-05/0.1516, allocations: 7.5 kB / 286.5 MB, free: 11.35 MB / 266.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.0002819/0.1519, allocations: 132 kB / 286.6 MB, free: 11.33 MB / 266.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0007333/0.1526, allocations: 353.4 kB / 286.9 MB, free: 11.3 MB / 266.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.001101/0.1537, allocations: 2.883 MB / 289.8 MB, free: 8.582 MB / 266.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0002889/0.154, allocations: 38.8 kB / 289.8 MB, free: 8.562 MB / 266.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.052e-05/0.154, allocations: 37.62 kB / 289.9 MB, free: 8.551 MB / 266.7 MB
Warning: Assuming fixed start value for the following 15 variables:
         V:VARIABLE(start = 2.0 unit = \"l\" fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         cytosol.V:VARIABLE(start = 2.0 unit = \"l\" fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         cytosol.GLY.c:VARIABLE(min = 0.0 start = 1.0 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         cytosol.mitochondria.V:VARIABLE(start = 2.0 unit = \"l\" fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         LACext.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.mitochondria.NADm.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.mitochondria.NADHm.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.CP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.LAC.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.AMP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.IMP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.ADP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.PYR.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.FDP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.NADH.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 35
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (157):
 * Single equations (assignments): 155
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,4,100.0%), (1,4,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 0 systems
Notification: Performance of prepare postOptimizeDAE: time 0.0003077/0.1544, allocations: 245.9 kB / 290.1 MB, free: 8.359 MB / 266.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 9.449e-05/0.1544, allocations: 77.11 kB / 290.2 MB, free: 8.348 MB / 266.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 8.543e-05/0.1545, allocations: 125 kB / 290.3 MB, free: 8.242 MB / 266.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.222e-06/0.1545, allocations: 11.09 kB / 290.3 MB, free: 8.242 MB / 266.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.419e-05/0.1546, allocations: 5.5 kB / 290.3 MB, free: 8.238 MB / 266.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 7.755e-06/0.1546, allocations: 8.094 kB / 290.3 MB, free: 8.238 MB / 266.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.00161/0.1562, allocations: 1.45 MB / 291.8 MB, free: 7.844 MB / 266.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.256e-06/0.1562, allocations: 0 / 291.8 MB, free: 7.844 MB / 266.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0006354/0.1568, allocations: 276.1 kB / 292.1 MB, free: 7.82 MB / 266.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 3.594e-05/0.1568, allocations: 50.89 kB / 292.1 MB, free: 7.785 MB / 266.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.0002248/0.1571, allocations: 125 kB / 292.2 MB, free: 7.758 MB / 266.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 4.588e-05/0.1571, allocations: 27.86 kB / 292.3 MB, free: 7.742 MB / 266.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.00094/0.1581, allocations: 2.886 MB / 295.1 MB, free: 4.906 MB / 266.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.164e-06/0.1581, allocations: 3.906 kB / 295.2 MB, free: 4.906 MB / 266.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0007927/0.1588, allocations: 0.9758 MB / 296.1 MB, free: 4.043 MB / 266.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 4.926e-05/0.1589, allocations: 24 kB / 296.2 MB, free: 4.02 MB / 266.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002098/0.1591, allocations: 20 kB / 296.2 MB, free: 4 MB / 266.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 7.166e-05/0.1592, allocations: 72.84 kB / 296.2 MB, free: 3.926 MB / 266.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.329e-05/0.1592, allocations: 27.95 kB / 296.3 MB, free: 3.902 MB / 266.7 MB
Notification: Performance of sorting global known variables: time 6.958e-05/0.1593, allocations: 132.7 kB / 296.4 MB, free: 3.773 MB / 266.7 MB
Notification: Performance of sort global known variables: time 3e-08/0.1593, allocations: 0 / 296.4 MB, free: 3.773 MB / 266.7 MB
Notification: Performance of remove unused functions: time 0.0005466/0.1598, allocations: 287.9 kB / 296.7 MB, free: 3.492 MB / 266.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 17 (V,cytosol.V,cytosol.NADH.n,cytosol.FDP.n,cytosol.PYR.n,cytosol.ADP.n,cytosol.IMP.n,cytosol.AMP.n,cytosol.LAC.n,cytosol.CP.n,cytosol.GLY.c,cytosol.G6P.c,cytosol.mitochondria.V,cytosol.mitochondria.NADHm.n,cytosol.mitochondria.NADm.n,cytosol.DHAP.c,LACext.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (106):
 * Single equations (assignments): 104
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,4,100.0%), (1,4,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 0 systems
Notification: Performance of Backend phase and start with SimCode phase: time 0.000875/0.1607, allocations: 1.457 MB / 298.1 MB, free: 2.012 MB / 266.7 MB
Notification: Performance of simCode: created initialization part: time 0.0006804/0.1614, allocations: 0.8691 MB / 299 MB, free: 1.125 MB / 266.7 MB
Notification: Performance of simCode: created event and clocks part: time 1.046e-05/0.1614, allocations: 8.438 kB / 299 MB, free: 1.117 MB / 266.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0003976/0.1618, allocations: 0.5835 MB / 299.6 MB, free: 0.5 MB / 266.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0003776/0.1622, allocations: 186.7 kB / 299.8 MB, free: 344 kB / 266.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.005292/0.1675, allocations: 4.907 MB / 304.7 MB, free: 11.26 MB / 282.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.00015/0.1676, allocations: 228.4 kB / 304.9 MB, free: 11.02 MB / 282.7 MB
Notification: Performance of simCode: alias equations: time 0.0003152/0.1679, allocations: 91.25 kB / 305 MB, free: 10.93 MB / 282.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0006094/0.1685, allocations: 0.6111 MB / 305.6 MB, free: 10.31 MB / 282.7 MB
Notification: Performance of SimCode: time 1.924e-06/0.1685, allocations: 4 kB / 305.6 MB, free: 10.31 MB / 282.7 MB
Notification: Performance of FMU documentation: time 0.0522/0.2207, allocations: 26.38 MB / 332 MB, free: 356 kB / 298.7 MB
Notification: FMU-only work: backend 0.0007681, simCode 0.002169, templates 0
Notification: Performance of buildModelFMU: Generate the FMI files: time 0.09534/0.3161, allocations: 1.326 MB / 333.3 MB, free: 14.99 MB / 314.7 MB
Notification: Building FMU for platform 'static' (1/1).
Notification: Finished FMU for platform 'static' (1/1).
Notification: Performance of buildModelFMU: Generate platform static: time 3.262/3.579, allocations: 31 kB / 333.4 MB, free: 14.96 MB / 314.7 MB
"
[Timeout remaining time 656]
(rm -f BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe ; mkfifo BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe ; head -c 1048576 < BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe >> ../files/BioChem_BioChem.Examples.centralMetabolism.extra_cellular.sim & (cd run_OMSimulator && /home/hudson/saved_omc/OMSimulator/install/bin/OMSimulator  --stripRoot --tempDir=temp_BioChem_BioChem_Examples_centralMetabolism_extra_cellular_fmu --startTime=0 --stopTime=0.5 --stepSize=0.0002 --mode=me --timeout=240 --tolerance=1e-05 ../BioChem_BioChem_Examples_centralMetabolism_extra_cellular.fmu) > BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe 2>&1) [Timeout 252.0]
(rm -f BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-cvode.pipe ; mkfifo BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-cvode.pipe ; head -c 1048576 < BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-cvode.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-cvode.sim & (cd run_OMSimulator-cs-cvode && /home/hudson/saved_omc/OMSimulator/install/bin/OMSimulator  --stripRoot --tempDir=temp_BioChem_BioChem_Examples_centralMetabolism_extra_cellular_OMSimulator-cs-cvode_fmu --startTime=0 --stopTime=0.5 --stepSize=0.0002 --mode=cs --timeout=240 --tolerance=1e-05 ../BioChem_BioChem_Examples_centralMetabolism_extra_cellular_OMSimulator-cs-cvode.fmu) > BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-cvode.pipe 2>&1) [Timeout 252.0]
(rm -f BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-euler.pipe ; mkfifo BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-euler.pipe ; head -c 1048576 < BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-euler.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-euler.sim & (cd run_OMSimulator-cs-euler && /home/hudson/saved_omc/OMSimulator/install/bin/OMSimulator  --stripRoot --tempDir=temp_BioChem_BioChem_Examples_centralMetabolism_extra_cellular_OMSimulator-cs-euler_fmu --startTime=0 --stopTime=0.5 --stepSize=0.0002 --mode=cs --timeout=240 --tolerance=1e-05 ../BioChem_BioChem_Examples_centralMetabolism_extra_cellular_OMSimulator-cs-euler.fmu) > BioChem_BioChem.Examples.centralMetabolism.extra_cellular_OMSimulator-cs-euler.pipe 2>&1) [Timeout 252.0]
OMSimulator-cs-euler timed out simulating the FMU
(rm -f BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy.pipe ; mkfifo BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy.pipe ; head -c 1048576 < BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy.sim & (cd run_fmpy && python3 -m fmpy simulate --output-file ../BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy_res.csv --start-time 0 --stop-time 0.5 --timeout 240 --relative-tolerance 1e-05 --interface-type ModelExchange --solver CVode --output-interval 0.0002 ../BioChem_BioChem_Examples_centralMetabolism_extra_cellular.fmu) > BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy.pipe 2>&1) [Timeout 252.0]
(rm -f BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy-fmi3-cs-cvode.pipe ; mkfifo BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy-fmi3-cs-cvode.pipe ; head -c 1048576 < BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy-fmi3-cs-cvode.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy-fmi3-cs-cvode.sim & (cd run_fmpy-fmi3-cs-cvode && python3 -m fmpy simulate --output-file ../BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy-fmi3-cs-cvode_res.csv --start-time 0 --stop-time 0.5 --timeout 240 --relative-tolerance 1e-05 --interface-type CoSimulation --output-interval 0.0002 ../BioChem_BioChem_Examples_centralMetabolism_extra_cellular_fmpy-fmi3-cs-cvode.fmu) > BioChem_BioChem.Examples.centralMetabolism.extra_cellular_fmpy-fmi3-cs-cvode.pipe 2>&1) [Timeout 252.0]
[Calling sys.exit(0), Time elapsed: 6.2462256802245975]