Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009567/0.0009567, allocations: 76.16 kB / 9.861 MB, free: 0.8281 MB / 10.45 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.001313/0.00227, allocations: 443.8 kB / 10.29 MB, free: 404 kB / 10.45 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001065/0.001065, allocations: 141.2 kB / 11.17 MB, free: 3 MB / 13.93 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.004651/0.005716, allocations: 475.6 kB / 11.64 MB, free: 2.531 MB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9695/0.9695, allocations: 177.2 MB / 189.5 MB, free: 5.305 MB / 186.7 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.0714/1.041, allocations: 53.65 MB / 243.2 MB, free: 15.58 MB / 250.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/package.mo): time 0.08395/0.08395, allocations: 17.45 MB / 261.4 MB, free: 13.38 MB / 266.7 MB
Notification: Performance of NFInstanceAPI.mkTop(<interactive>): time 0.009653/0.0936, allocations: 6.964 MB / 268.3 MB, free: 6.395 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: setCommandLineOptions("--fmiFlags=s:cvode")
Running command: "" <> buildModelFMU(Chemical.Examples.debug.EnzymeKinetics2_,fileNamePrefix="Chemical_master_Chemical_Examples_debug_EnzymeKinetics2_",fmuType="me_cs",version="2.0+3.0",platforms={"static"})
"" <> buildModelFMU(Chemical.Examples.debug.EnzymeKinetics2_,fileNamePrefix="Chemical_master_Chemical_Examples_debug_EnzymeKinetics2_",fmuType="me_cs",version="2.0+3.0",platforms={"static"}) [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.723e-06/1.723e-06, allocations: 0 / 269.6 MB, free: 5.168 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.788e-05/1.961e-05, allocations: 2.312 kB / 269.6 MB, free: 5.164 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.1245/0.1245, allocations: 12.24 MB / 281.8 MB, free: 15.16 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01761/0.1421, allocations: 11.21 MB / 293 MB, free: 8 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001097/0.1432, allocations: 84.56 kB / 293.1 MB, free: 7.957 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003198/0.1464, allocations: 2.032 MB / 295.1 MB, free: 6.863 MB / 282.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.002489/0.1489, allocations: 1.54 MB / 296.7 MB, free: 5.594 MB / 282.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.004754/0.1536, allocations: 4.3 MB / 301 MB, free: 2.266 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.003288/0.1569, allocations: 3.635 MB / 304.6 MB, free: 15.48 MB / 298.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0006418/0.1576, allocations: 0.5779 MB / 305.2 MB, free: 14.84 MB / 298.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.00191/0.1595, allocations: 2.173 MB / 307.4 MB, free: 12.65 MB / 298.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.00153/0.161, allocations: 1.567 MB / 308.9 MB, free: 11.08 MB / 298.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003507/0.1614, allocations: 312 kB / 309.2 MB, free: 10.77 MB / 298.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.003131/0.1645, allocations: 2.066 MB / 311.3 MB, free: 8.703 MB / 298.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0005034/0.165, allocations: 0.9268 MB / 312.2 MB, free: 7.773 MB / 298.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0007561/0.1658, allocations: 0.9703 MB / 313.2 MB, free: 6.801 MB / 298.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.003525/0.1693, allocations: 4.477 MB / 317.7 MB, free: 2.309 MB / 298.7 MB
Notification: Performance of FrontEnd - DAE generated: time 1.156e-05/0.1693, allocations: 0 / 317.7 MB, free: 2.309 MB / 298.7 MB
Notification: Performance of FrontEnd: time 1.603e-06/0.1693, allocations: 4 kB / 317.7 MB, free: 2.305 MB / 298.7 MB
Notification: Performance of Transformations before backend: time 6.034e-05/0.1694, allocations: 0 / 317.7 MB, free: 2.305 MB / 298.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.004673/0.174, allocations: 4.92 MB / 322.6 MB, free: 13.31 MB / 314.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.268e-05/0.1741, allocations: 12.03 kB / 322.6 MB, free: 13.3 MB / 314.7 MB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0003212/0.1744, allocations: 0.4913 MB / 323.1 MB, free: 12.8 MB / 314.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001653/0.176, allocations: 1.57 MB / 324.7 MB, free: 11.23 MB / 314.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001626/0.1777, allocations: 1.342 MB / 326 MB, free: 9.84 MB / 314.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002414/0.1779, allocations: 0.5032 MB / 326.5 MB, free: 9.273 MB / 314.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002417/0.1781, allocations: 296.3 kB / 326.8 MB, free: 8.984 MB / 314.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003045/0.1812, allocations: 3.804 MB / 330.6 MB, free: 5.141 MB / 314.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 4.472e-05/0.1812, allocations: 4.125 kB / 330.6 MB, free: 5.137 MB / 314.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001349/0.1814, allocations: 123.9 kB / 330.7 MB, free: 5.016 MB / 314.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003029/0.1817, allocations: 473.7 kB / 331.2 MB, free: 4.555 MB / 314.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.003756/0.1854, allocations: 4.535 MB / 335.7 MB, free: 12 kB / 314.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01276/0.1982, allocations: 12.54 MB / 348.3 MB, free: 3.371 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.00118/0.1994, allocations: 1.006 MB / 349.3 MB, free: 2.355 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0006852/0.2, allocations: 0.5762 MB / 349.9 MB, free: 1.781 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.00824/0.2083, allocations: 7.696 MB / 357.6 MB, free: 10.06 MB / 346.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.587e-05/0.2083, allocations: 43.88 kB / 357.6 MB, free: 10.01 MB / 346.7 MB
Notification: Performance of pre-optimization done (n=188): time 2.234e-06/0.2083, allocations: 0 / 357.6 MB, free: 10.01 MB / 346.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 1.6980997873470187]