Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.SimpleReactionsWithJunction.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.00106/0.00106, allocations: 76.16 kB / 9.861 MB, free: 0.8281 MB / 10.45 MB Notification: Performance of NFInstanceAPI.mkTop(): time 0.001423/0.002483, allocations: 443.8 kB / 10.29 MB, free: 404 kB / 10.45 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.00113/0.00113, allocations: 141.2 kB / 11.17 MB, free: 3 MB / 13.93 MB Notification: Performance of NFInstanceAPI.mkTop(): time 0.00146/0.002591, allocations: 475.6 kB / 11.64 MB, free: 2.531 MB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9951/0.9951, allocations: 177.2 MB / 189.5 MB, free: 5.32 MB / 186.7 MB Notification: Performance of NFInstanceAPI.mkTop(): time 0.07304/1.068, allocations: 53.66 MB / 243.2 MB, free: 15.59 MB / 250.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/package.mo): time 0.07787/0.07787, allocations: 17.44 MB / 261.4 MB, free: 13.39 MB / 266.7 MB Notification: Performance of NFInstanceAPI.mkTop(): time 0.007872/0.08575, allocations: 6.956 MB / 268.3 MB, free: 6.414 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: setCommandLineOptions("--fmiFlags=s:cvode") Running command: "" <> buildModelFMU(Chemical.Examples.SimpleReactionsWithJunction,fileNamePrefix="Chemical_master_Chemical_Examples_SimpleReactionsWithJunction",fmuType="me_cs",version="2.0+3.0",platforms={"static"}) "" <> buildModelFMU(Chemical.Examples.SimpleReactionsWithJunction,fileNamePrefix="Chemical_master_Chemical_Examples_SimpleReactionsWithJunction",fmuType="me_cs",version="2.0+3.0",platforms={"static"}) [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.092e-06/1.092e-06, allocations: 0 / 269.5 MB, free: 5.191 MB / 266.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 9.698e-06/1.079e-05, allocations: 9.547 kB / 269.6 MB, free: 5.184 MB / 266.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Processes.mo:1084:7-1084:40:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Processes.mo:1084:7-1084:40:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"dropOfCommons\" component but an inner \"dropOfCommons\" component is not defined. Use Chemical.DropOfCommons in your model to specify system properties. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1731:7-1731:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1731:7-1731:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Examples.SimpleReactionsWithJunction): time 0.1286/0.1286, allocations: 23.27 MB / 292.8 MB, free: 8.113 MB / 282.7 MB Notification: Performance of NFInst.instExpressions: time 0.02407/0.1527, allocations: 14.29 MB / 307.1 MB, free: 12.95 MB / 298.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.003092/0.1558, allocations: 150.9 kB / 307.3 MB, free: 12.8 MB / 298.7 MB Notification: Performance of NFTyping.typeComponents: time 0.003912/0.1597, allocations: 2.726 MB / 310 MB, free: 10.06 MB / 298.7 MB Notification: Performance of NFTyping.typeBindings: time 0.004495/0.1642, allocations: 2.827 MB / 312.8 MB, free: 7.215 MB / 298.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.005974/0.1702, allocations: 5.085 MB / 317.9 MB, free: 2.109 MB / 298.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r1.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r1.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r1.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r1.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r1.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r1.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r1.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r1.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r1.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r1.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r1.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter r_ref.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter r_ref.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter r_ref.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter r_ref.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter r_ref.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter r_ref.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter r_ref.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter r_ref.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter r_ref.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter r_ref.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.1-master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter r_ref.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value. Notification: Performance of NFFlatten.flatten: time 0.006662/0.1768, allocations: 7.551 MB / 325.5 MB, free: 10.54 MB / 314.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001651/0.1785, allocations: 1.748 MB / 327.2 MB, free: 8.68 MB / 314.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.004185/0.1827, allocations: 4.789 MB / 332 MB, free: 3.828 MB / 314.7 MB Notification: Performance of NFSimplifyModel.simplify: time 0.003524/0.1862, allocations: 3.418 MB / 335.4 MB, free: 412 kB / 314.7 MB Notification: Performance of NFPackage.collectConstants: time 0.0008426/0.187, allocations: 0.7344 MB / 336.1 MB, free: 15.66 MB / 330.7 MB Notification: Performance of NFFlatten.collectFunctions: time 0.003611/0.1906, allocations: 2.586 MB / 338.7 MB, free: 13.08 MB / 330.7 MB Notification: Performance of NFScalarize.scalarize: time 0.001107/0.1917, allocations: 2.076 MB / 340.8 MB, free: 11 MB / 330.7 MB Notification: Performance of NFVerifyModel.verify: time 0.001758/0.1935, allocations: 2.179 MB / 343 MB, free: 8.812 MB / 330.7 MB Notification: Performance of NFConvertDAE.convert: time 0.006399/0.1999, allocations: 8.267 MB / 351.3 MB, free: 0.5156 MB / 330.7 MB Notification: Performance of FrontEnd - DAE generated: time 1.108e-05/0.1999, allocations: 0 / 351.3 MB, free: 0.5156 MB / 330.7 MB Notification: Performance of FrontEnd: time 1.412e-06/0.1999, allocations: 0 / 351.3 MB, free: 0.5156 MB / 330.7 MB Notification: Performance of Transformations before backend: time 5.834e-05/0.2, allocations: 0 / 351.3 MB, free: 0.5156 MB / 330.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 2093 * Number of variables: 2093 Notification: Performance of Generate backend data structure: time 0.008457/0.2084, allocations: 10.21 MB / 361.5 MB, free: 6.211 MB / 346.7 MB Notification: Performance of prepare preOptimizeDAE: time 3.649e-05/0.2085, allocations: 12.03 kB / 361.5 MB, free: 6.199 MB / 346.7 MB Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0007003/0.2092, allocations: 1.053 MB / 362.5 MB, free: 5.133 MB / 346.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.003981/0.2131, allocations: 3.225 MB / 365.8 MB, free: 1.906 MB / 346.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.002925/0.2161, allocations: 2.587 MB / 368.3 MB, free: 15.23 MB / 362.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0004629/0.2165, allocations: 1.108 MB / 369.4 MB, free: 13.99 MB / 362.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0005296/0.2171, allocations: 0.6525 MB / 370.1 MB, free: 13.34 MB / 362.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.006421/0.2235, allocations: 7.63 MB / 377.7 MB, free: 5.629 MB / 362.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 7.254e-05/0.2236, allocations: 192 / 377.7 MB, free: 5.629 MB / 362.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.000348/0.2239, allocations: 267.9 kB / 378 MB, free: 5.367 MB / 362.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0005496/0.2244, allocations: 0.8384 MB / 378.8 MB, free: 4.523 MB / 362.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.006594/0.231, allocations: 8.172 MB / 387 MB, free: 12.3 MB / 378.7 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.02664/0.2577, allocations: 26.69 MB / 413.7 MB, free: 1.441 MB / 394.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.002793/0.2605, allocations: 2.426 MB / 416.1 MB, free: 14.98 MB / 410.7 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.001578/0.2621, allocations: 1.426 MB / 417.5 MB, free: 13.55 MB / 410.7 MB Notification: Performance of preOpt evalFunc (simulation): time 0.1345/0.3966, allocations: 15.65 MB / 433.2 MB, free: 97.29 MB / 410.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.999e-05/0.3966, allocations: 66.95 kB / 433.3 MB, free: 97.25 MB / 410.7 MB Notification: Performance of pre-optimization done (n=440): time 4.108e-06/0.3966, allocations: 0 / 433.3 MB, free: 97.25 MB / 410.7 MB Error: Internal error IndexReduction.pantelidesIndexReduction failed! System is structurally singular and cannot be handled because the number of unassigned equations is larger than the number of states. Use -d=bltdump to get more information. Error: Internal error Transformation Module PFPlusExt index Reduction Method Pantelides failed! " [Timeout remaining time 660] [Calling sys.exit(0), Time elapsed: 1.9136913623660803]