Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001319/0.001319, allocations: 85.38 kB / 19.76 MB, free: 2.023 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001368/0.001368, allocations: 158.2 kB / 23.01 MB, free: 4.961 MB / 14.72 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.357/1.357, allocations: 177.2 MB / 203.4 MB, free: 8.938 MB / 190.1 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1227/0.1227, allocations: 17.45 MB / 277.2 MB, free: 15.18 MB / 270.1 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Chemical requested package Modelica of version 4.0.0. Modelica 4.1.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.002915/0.002915, allocations: 67.89 kB / 412.6 MB, free: 5.555 MB / 382.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1045/0.1074, allocations: 59.87 MB / 472.4 MB, free: 9.57 MB / 446.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.3058/0.4132, allocations: 74.36 MB / 0.534 GB, free: 12.01 MB / 446.1 MB
Notification: Performance of NFInst.instExpressions: time 0.4878/0.9011, allocations: 191.3 MB / 0.7208 GB, free: 4.562 MB / 0.5762 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.009307/0.9104, allocations: 228.5 kB / 0.721 GB, free: 4.562 MB / 0.5762 GB
Notification: Performance of NFTyping.typeComponents: time 0.01159/0.922, allocations: 4.449 MB / 0.7253 GB, free: 4.539 MB / 0.5762 GB
Notification: Performance of NFTyping.typeBindings: time 0.04387/0.9658, allocations: 17.88 MB / 0.7428 GB, free: 4.406 MB / 0.5762 GB
Notification: Performance of NFTyping.typeClassSections: time 0.06975/1.036, allocations: 32.67 MB / 0.7747 GB, free: 11.88 MB / 0.5919 GB
Notification: Performance of NFFlatten.flatten: time 0.08545/1.121, allocations: 89.12 MB / 0.8617 GB, free: 3.246 MB / 0.6387 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.06986/1.191, allocations: 51.84 MB / 0.9124 GB, free: 1.336 MB / 0.6856 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.7176/1.908, allocations: 56.59 MB / 0.9676 GB, free: 41.4 MB / 0.7325 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.09025/1.999, allocations: 54.23 MB / 1.021 GB, free: 38.47 MB / 0.7325 GB
Notification: Performance of NFPackage.collectConstants: time 0.03977/2.038, allocations: 12.2 MB / 1.032 GB, free: 38.47 MB / 0.7325 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1074/2.146, allocations: 33.89 MB / 1.066 GB, free: 38.47 MB / 0.7325 GB
Notification: Performance of NFScalarize.scalarize: time 0.04614/2.192, allocations: 24.03 MB / 1.089 GB, free: 28.68 MB / 0.7325 GB
Notification: Performance of NFVerifyModel.verify: time 0.08594/2.278, allocations: 35.17 MB / 1.123 GB, free: 0 / 0.7325 GB
Notification: Performance of NFConvertDAE.convert: time 0.9077/3.186, allocations: 160.2 MB / 1.28 GB, free: 109.6 MB / 0.8577 GB
Notification: Performance of FrontEnd - DAE generated: time 6.172e-06/3.186, allocations: 2.156 kB / 1.28 GB, free: 109.6 MB / 0.8577 GB
Notification: Performance of FrontEnd: time 1.122e-06/3.186, allocations: 0 / 1.28 GB, free: 109.6 MB / 0.8577 GB
Notification: Performance of Transformations before backend: time 0.003189/3.189, allocations: 1.859 kB / 1.28 GB, free: 109.6 MB / 0.8577 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.238/3.427, allocations: 71.69 MB / 1.35 GB, free: 89.24 MB / 0.8577 GB
Notification: Performance of prepare preOptimizeDAE: time 3.725e-05/3.427, allocations: 8.938 kB / 1.35 GB, free: 89.24 MB / 0.8577 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0747/3.502, allocations: 11.94 MB / 1.362 GB, free: 86.18 MB / 0.8577 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.08803/3.59, allocations: 42.61 MB / 1.403 GB, free: 81.54 MB / 0.8577 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005706/3.595, allocations: 9.235 MB / 1.412 GB, free: 74.7 MB / 0.8577 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02958/3.625, allocations: 4.598 MB / 1.417 GB, free: 73.42 MB / 0.8577 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.2644/3.889, allocations: 112.9 MB / 1.527 GB, free: 0.6523 MB / 0.8889 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002148/3.891, allocations: 27.75 kB / 1.527 GB, free: 0.6406 MB / 0.8889 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.02687/3.918, allocations: 1.762 MB / 1.529 GB, free: 14.89 MB / 0.9045 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001003/3.919, allocations: 1.06 MB / 1.53 GB, free: 13.84 MB / 0.9045 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.5922/4.512, allocations: 153 MB / 1.679 GB, free: 379.5 MB / 0.9827 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.7398/5.251, allocations: 389.2 MB / 2.059 GB, free: 48.62 MB / 0.9827 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.294/7.545, allocations: 0.6474 GB / 2.707 GB, free: 356.1 MB / 0.9827 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.096/7.641, allocations: 60.05 MB / 2.765 GB, free: 313.7 MB / 0.9827 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.4459/8.087, allocations: 254.7 MB / 3.014 GB, free: 73.85 MB / 0.9827 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002257/8.088, allocations: 337.9 kB / 3.014 GB, free: 73.51 MB / 0.9827 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.09115/8.179, allocations: 29.14 MB / 3.043 GB, free: 46.5 MB / 0.9827 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001491/8.179, allocations: 0 / 3.043 GB, free: 46.5 MB / 0.9827 GB
Notification: Performance of matching and sorting (n=3387): time 2.334/10.51, allocations: 423.7 MB / 3.457 GB, free: 97 MB / 0.9827 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.00026/10.51, allocations: 453.3 kB / 3.457 GB, free: 96.52 MB / 0.9827 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.04525/10.56, allocations: 30.72 MB / 3.487 GB, free: 66.15 MB / 0.9827 GB
Notification: Performance of collectPreVariables (initialization): time 0.0109/10.57, allocations: 0.572 MB / 3.488 GB, free: 65.57 MB / 0.9827 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01225/10.58, allocations: 21.63 MB / 3.509 GB, free: 43.96 MB / 0.9827 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01796/10.6, allocations: 12.42 MB / 3.521 GB, free: 31.69 MB / 0.9827 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.04175/10.64, allocations: 9.926 MB / 3.531 GB, free: 21.74 MB / 0.9827 GB
Notification: Performance of setup shared object (initialization): time 3.851e-05/10.64, allocations: 301.1 kB / 3.531 GB, free: 21.45 MB / 0.9827 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.3893/11.03, allocations: 39.05 MB / 3.569 GB, free: 317.7 MB / 0.9827 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.07024/11.1, allocations: 53.24 MB / 3.621 GB, free: 284.4 MB / 0.9827 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1305/11.23, allocations: 96.36 MB / 3.715 GB, free: 230.1 MB / 0.9827 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004831/11.23, allocations: 129.2 kB / 3.715 GB, free: 230.1 MB / 0.9827 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.264/12.49, allocations: 257.1 MB / 3.966 GB, free: 23.2 MB / 0.9827 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0002907/12.5, allocations: 204 kB / 3.967 GB, free: 23 MB / 0.9827 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.000671/12.5, allocations: 444 kB / 3.967 GB, free: 22.57 MB / 0.9827 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.5128/13.01, allocations: 73.7 MB / 4.039 GB, free: 276 MB / 0.9827 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.04959/13.06, allocations: 11.18 MB / 4.05 GB, free: 275.6 MB / 0.9827 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.5168/13.58, allocations: 309.6 MB / 4.352 GB, free: 66.03 MB / 0.9827 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05322/13.63, allocations: 2.478 MB / 4.355 GB, free: 63.55 MB / 0.9827 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01665/13.64, allocations: 2.8 MB / 4.357 GB, free: 60.75 MB / 0.9827 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.04678/13.69, allocations: 18.35 MB / 4.375 GB, free: 42.65 MB / 0.9827 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02182/13.71, allocations: 3.164 MB / 4.378 GB, free: 41.24 MB / 0.9827 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.14/14.85, allocations: 152.3 MB / 4.527 GB, free: 266.2 MB / 0.9827 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003436/14.85, allocations: 362.3 kB / 4.527 GB, free: 266.2 MB / 0.9827 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0005362/14.85, allocations: 60.22 kB / 4.527 GB, free: 266.2 MB / 0.9827 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001083/14.86, allocations: 180 kB / 4.528 GB, free: 266.2 MB / 0.9827 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.901/15.76, allocations: 223.3 MB / 4.746 GB, free: 112.6 MB / 0.9827 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0002849/15.76, allocations: 16.03 kB / 4.746 GB, free: 112.6 MB / 0.9827 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04038/15.8, allocations: 7.251 MB / 4.753 GB, free: 105.4 MB / 0.9827 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.09083/15.89, allocations: 39.75 MB / 4.792 GB, free: 65.96 MB / 0.9827 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.009691/15.9, allocations: 1.449 MB / 4.793 GB, free: 64.51 MB / 0.9827 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.6593/16.56, allocations: 155.6 MB / 4.945 GB, free: 244.1 MB / 0.9827 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 8.686e-06/16.56, allocations: 15.41 kB / 4.945 GB, free: 244.1 MB / 0.9827 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.8353/17.39, allocations: 200.2 MB / 5.141 GB, free: 146.6 MB / 0.9827 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.0289/17.42, allocations: 11.32 MB / 5.152 GB, free: 137.2 MB / 0.9827 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01472/17.44, allocations: 0.9216 MB / 5.152 GB, free: 136.2 MB / 0.9827 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03675/17.47, allocations: 1.549 MB / 5.154 GB, free: 134.7 MB / 0.9827 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02163/17.49, allocations: 4.677 MB / 5.159 GB, free: 130 MB / 0.9827 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.009014/17.5, allocations: 1.382 MB / 5.16 GB, free: 128.6 MB / 0.9827 GB
Notification: Performance of sorting global known variables: time 0.03203/17.54, allocations: 20.8 MB / 5.18 GB, free: 108 MB / 0.9827 GB
Notification: Performance of sort global known variables: time 2.71e-07/17.54, allocations: 0 / 5.18 GB, free: 108 MB / 0.9827 GB
Notification: Performance of remove unused functions: time 0.08393/17.62, allocations: 20.21 MB / 5.2 GB, free: 88.04 MB / 0.9827 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.03032/17.65, allocations: 10.82 MB / 5.211 GB, free: 78.5 MB / 0.9827 GB
Notification: Performance of simCode: created initialization part: time 0.5197/18.17, allocations: 85.29 MB / 5.294 GB, free: 292 MB / 0.9827 GB
Notification: Performance of simCode: created event and clocks part: time 2.127e-05/18.17, allocations: 2.062 kB / 5.294 GB, free: 292 MB / 0.9827 GB
Notification: Performance of simCode: created simulation system equations: time 0.1225/18.29, allocations: 54.54 MB / 5.347 GB, free: 284.9 MB / 0.9827 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05189/18.34, allocations: 7.697 MB / 5.355 GB, free: 282 MB / 0.9827 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.2314/18.57, allocations: 122.9 MB / 5.475 GB, free: 232 MB / 0.9827 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05036/18.63, allocations: 30.57 MB / 5.504 GB, free: 213.7 MB / 0.9827 GB
Notification: Performance of simCode: alias equations: time 0.05385/18.68, allocations: 15.45 MB / 5.52 GB, free: 203.4 MB / 0.9827 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.02253/18.7, allocations: 4.247 MB / 5.524 GB, free: 199.8 MB / 0.9827 GB
Notification: Performance of SimCode: time 1.032e-06/18.7, allocations: 0 / 5.524 GB, free: 199.8 MB / 0.9827 GB
Notification: Performance of Templates: time 2.329/21.03, allocations: 1.017 GB / 6.541 GB, free: 249.8 MB / 0.9827 GB
"
[Timeout remaining time 639]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -s ida -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 480]
[Calling sys.exit(0), Time elapsed: 60.80971417808905]
Failed to read output from testmodel.py, exit status != 0:
21.04190618696157 21.049264784 17.861241409
Calling exit ...
<OMPython.OMCSessionZMQ object at 0x7fd964be6fe0>