Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009748/0.0009748, allocations: 81.17 kB / 19.87 MB, free: 4.621 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.000953/0.000953, allocations: 169 kB / 23.27 MB, free: 1.223 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9951/0.9951, allocations: 177.2 MB / 203.7 MB, free: 5.512 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.06065/0.06065, allocations: 12.77 MB / 273 MB, free: 132 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC")
translateModel(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.513e-06/1.513e-06, allocations: 0 / 347.2 MB, free: 0.9414 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.956e-05/2.107e-05, allocations: 2.312 kB / 347.2 MB, free: 0.9375 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC): time 0.007153/0.007174, allocations: 10.41 MB / 357.6 MB, free: 6.484 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01193/0.0191, allocations: 11.05 MB / 368.6 MB, free: 11.39 MB / 298.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001577/0.02068, allocations: 102.9 kB / 368.7 MB, free: 11.29 MB / 298.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0007718/0.02145, allocations: 400 kB / 369.1 MB, free: 10.89 MB / 298.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.00526/0.02671, allocations: 2.206 MB / 371.3 MB, free: 8.68 MB / 298.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.004001/0.03071, allocations: 2.002 MB / 373.3 MB, free: 6.672 MB / 298.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003501/0.03421, allocations: 2.876 MB / 376.2 MB, free: 3.781 MB / 298.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0006693/0.03488, allocations: 388.1 kB / 376.6 MB, free: 3.375 MB / 298.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001783/0.03667, allocations: 1.368 MB / 378 MB, free: 2.004 MB / 298.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001236/0.0379, allocations: 1.243 MB / 379.2 MB, free: 0.7539 MB / 298.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002279/0.03813, allocations: 144 kB / 379.3 MB, free: 0.6133 MB / 298.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002759/0.03841, allocations: 160 kB / 379.5 MB, free: 468 kB / 298.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003318/0.03874, allocations: 0.5564 MB / 380.1 MB, free: 15.9 MB / 314.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0005821/0.03932, allocations: 0.7012 MB / 380.8 MB, free: 15.2 MB / 314.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001439/0.04076, allocations: 1.88 MB / 382.6 MB, free: 13.31 MB / 314.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.847e-06/0.04076, allocations: 0 / 382.6 MB, free: 13.31 MB / 314.7 MB
Notification: Performance of FrontEnd: time 1.653e-06/0.04077, allocations: 4 kB / 382.6 MB, free: 13.3 MB / 314.7 MB
Notification: Performance of Transformations before backend: time 2.401e-05/0.04079, allocations: 0 / 382.6 MB, free: 13.3 MB / 314.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 287
 * Number of variables: 287
Notification: Performance of Generate backend data structure: time 0.002677/0.04347, allocations: 2.605 MB / 385.2 MB, free: 10.65 MB / 314.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.608e-05/0.0435, allocations: 15.98 kB / 385.3 MB, free: 10.63 MB / 314.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0007113/0.04421, allocations: 431.3 kB / 385.7 MB, free: 10.21 MB / 314.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001359/0.04557, allocations: 1.292 MB / 387 MB, free: 8.875 MB / 314.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 4.731e-05/0.04562, allocations: 90.64 kB / 387.1 MB, free: 8.785 MB / 314.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001033/0.04572, allocations: 124.3 kB / 387.2 MB, free: 8.664 MB / 314.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0008423/0.04657, allocations: 0.7889 MB / 388 MB, free: 7.828 MB / 314.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.856e-05/0.04658, allocations: 3.938 kB / 388 MB, free: 7.824 MB / 314.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 6.2e-05/0.04665, allocations: 44 kB / 388 MB, free: 7.781 MB / 314.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.588e-05/0.04666, allocations: 32 kB / 388.1 MB, free: 7.75 MB / 314.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0004928/0.04715, allocations: 383.3 kB / 388.4 MB, free: 7.363 MB / 314.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.003937/0.05109, allocations: 3.161 MB / 391.6 MB, free: 4.137 MB / 314.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0004426/0.05153, allocations: 418 kB / 392 MB, free: 3.703 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0002252/0.05176, allocations: 229.2 kB / 392.2 MB, free: 3.469 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 4.014e-05/0.0518, allocations: 24.94 kB / 392.2 MB, free: 3.445 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.726e-05/0.05183, allocations: 54.31 kB / 392.3 MB, free: 3.383 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=98): time 2.084e-06/0.05183, allocations: 0 / 392.3 MB, free: 3.383 MB / 314.7 MB
Notification: Performance of matching and sorting (n=161): time 0.02201/0.07384, allocations: 6.969 MB / 399.3 MB, free: 12.39 MB / 330.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.271e-05/0.07389, allocations: 94.42 kB / 399.4 MB, free: 12.28 MB / 330.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001287/0.07518, allocations: 1.502 MB / 400.9 MB, free: 10.73 MB / 330.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0001197/0.0753, allocations: 53.7 kB / 400.9 MB, free: 10.67 MB / 330.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.000496/0.07579, allocations: 0.974 MB / 401.9 MB, free: 9.684 MB / 330.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0003863/0.07618, allocations: 0.581 MB / 402.5 MB, free: 9.098 MB / 330.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003961/0.07658, allocations: 356.9 kB / 402.8 MB, free: 8.738 MB / 330.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001076/0.07668, allocations: 480.7 kB / 403.3 MB, free: 8.266 MB / 330.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0004084/0.07709, allocations: 243.8 kB / 403.5 MB, free: 8.027 MB / 330.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0006016/0.07769, allocations: 0.8039 MB / 404.3 MB, free: 7.004 MB / 330.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001156/0.07885, allocations: 1.23 MB / 405.6 MB, free: 5.555 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.037e-05/0.07886, allocations: 4 kB / 405.6 MB, free: 5.551 MB / 330.7 MB
Notification: Performance of matching and sorting (n=236) (initialization): time 0.007614/0.08647, allocations: 2.962 MB / 408.5 MB, free: 2.566 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.865e-05/0.0865, allocations: 12 kB / 408.5 MB, free: 2.555 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.1e-05/0.08652, allocations: 20.05 kB / 408.6 MB, free: 2.535 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1414/0.228, allocations: 2.937 MB / 411.5 MB, free: 64.84 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0006694/0.2286, allocations: 237.2 kB / 411.7 MB, free: 64.84 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.01635/0.245, allocations: 10.43 MB / 422.2 MB, free: 60.69 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001173/0.2461, allocations: 80.97 kB / 422.2 MB, free: 60.65 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001787/0.2463, allocations: 60.72 kB / 422.3 MB, free: 60.64 MB / 330.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 52
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (120):
 * Single equations (assignments): 118
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(3,56,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of prepare postOptimizeDAE: time 0.0003855/0.2467, allocations: 259.9 kB / 422.5 MB, free: 60.43 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003496/0.2471, allocations: 269.9 kB / 422.8 MB, free: 60.29 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0004019/0.2475, allocations: 333.6 kB / 423.1 MB, free: 60.03 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.006e-05/0.2475, allocations: 17.62 kB / 423.2 MB, free: 60.03 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 3.054e-05/0.2475, allocations: 12.81 kB / 423.2 MB, free: 60.03 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 9.739e-06/0.2475, allocations: 7.5 kB / 423.2 MB, free: 60.03 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001348/0.2489, allocations: 0.9627 MB / 424.1 MB, free: 59.71 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.6e-06/0.2489, allocations: 0 / 424.1 MB, free: 59.71 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.000272/0.2491, allocations: 94.06 kB / 424.2 MB, free: 59.71 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.01235/0.2615, allocations: 2.779 MB / 427 MB, free: 59.56 MB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.000106/0.2616, allocations: 31.36 kB / 427 MB, free: 59.54 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.01559/0.2772, allocations: 10.36 MB / 437.4 MB, free: 52.01 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.122e-06/0.2772, allocations: 0 / 437.4 MB, free: 52.01 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.00949/0.2867, allocations: 3.158 MB / 440.6 MB, free: 48.94 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0005772/0.2873, allocations: 394.9 kB / 440.9 MB, free: 48.55 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002046/0.2875, allocations: 24 kB / 441 MB, free: 48.53 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0007557/0.2882, allocations: 36 kB / 441 MB, free: 48.5 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003371/0.2885, allocations: 157.9 kB / 441.1 MB, free: 48.34 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.000134/0.2887, allocations: 32.03 kB / 441.2 MB, free: 48.31 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0005633/0.2892, allocations: 0.8358 MB / 442 MB, free: 47.54 MB / 330.7 MB
Notification: Performance of sort global known variables: time 7e-08/0.2892, allocations: 0 / 442 MB, free: 47.54 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.001763/0.291, allocations: 0.918 MB / 442.9 MB, free: 46.62 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 1 (hemoglobinConservationLaw.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (45):
 * Single equations (assignments): 43
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 1 system
   {(6,53,86.1%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001853/0.2912, allocations: 125.9 kB / 443.1 MB, free: 46.5 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.004028/0.2952, allocations: 2.274 MB / 445.3 MB, free: 44.27 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 2.014e-06/0.2952, allocations: 4.125 kB / 445.3 MB, free: 44.26 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.003217/0.2984, allocations: 1.861 MB / 447.2 MB, free: 42.4 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001178/0.2996, allocations: 353 kB / 447.5 MB, free: 42.07 MB / 330.7 MB
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit %: Parse error
Error: Error parsing unit kcal/mol: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003898/0.3035, allocations: 3.358 MB / 450.9 MB, free: 38.73 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003345/0.3039, allocations: 0.4956 MB / 451.4 MB, free: 38.21 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0002829/0.3041, allocations: 151.5 kB / 451.5 MB, free: 38.06 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003836/0.3045, allocations: 362 kB / 451.9 MB, free: 37.71 MB / 330.7 MB
Notification: Performance of SimCode: time 7.32e-07/0.3045, allocations: 0 / 451.9 MB, free: 37.71 MB / 330.7 MB
Notification: Performance of Templates: time 0.06197/0.3665, allocations: 72.69 MB / 0.5123 GB, free: 13.32 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.sim & (cd run_cvode && ../Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS -inputPath=.. -s cvode) > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_gbode.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_gbode.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_gbode.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_gbode.sim & (cd run_gbode && ../Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS -inputPath=.. -s gbode -gbm=radauIIA3) > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_gbode.pipe 2>&1) [Timeout 240]
(rm -f Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_ida.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_ida.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_ida.pipe >> /var/lib/jenkins/ws/OpenModelicaLibraryTestingWork/OpenModelicaLibraryTesting/files/Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_ida.sim & (cd run_ida && ../Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS -inputPath=.. -s ida) > Bodylight_Bodylight.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC_ida.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 5.348515852354467]