Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo", uses=false) Using package Physiolibrary with version 3.0.0-beta1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Running command: translateModel(Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation") translateModel(Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001723/0.001723, allocations: 182.5 kB / 15.98 MB, free: 5.77 MB / 13.93 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.511/1.511, allocations: 222.9 MB / 239.7 MB, free: 11 MB / 202.7 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001026/0.001026, allocations: 105.8 kB / 289.9 MB, free: 10.94 MB / 234.7 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo): time 0.3639/0.3639, allocations: 36.67 MB / 376.7 MB, free: 41.46 MB / 298.7 MB Warning: Ignoring unknown experiment annotation option: __Dymola_Algorithm = "Dassl" Notification: Performance of FrontEnd - loaded program: time 0.001294/0.001294, allocations: 71.89 kB / 446.4 MB, free: 11.83 MB / 330.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1373/0.1387, allocations: 58.92 MB / 0.4935 GB, free: 0.8555 MB / 378.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:4671:7-4671:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:4671:7-4671:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer "system" component but an inner "system" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation): time 0.3183/0.457, allocations: 41.74 MB / 0.5343 GB, free: 21.04 MB / 378.7 MB Notification: Performance of NFInst.instExpressions: time 0.08981/0.5468, allocations: 71.99 MB / 0.6046 GB, free: 8.906 MB / 426.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.008057/0.5549, allocations: 103.2 kB / 0.6047 GB, free: 8.805 MB / 426.7 MB Notification: Performance of NFTyping.typeComponents: time 0.006399/0.5614, allocations: 1.452 MB / 0.6061 GB, free: 7.344 MB / 426.7 MB Notification: Performance of NFTyping.typeBindings: time 0.02238/0.5838, allocations: 5.007 MB / 0.611 GB, free: 2.305 MB / 426.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.03076/0.6146, allocations: 9.032 MB / 0.6198 GB, free: 9.227 MB / 442.7 MB Notification: Performance of NFFlatten.flatten: time 0.02912/0.6437, allocations: 25.89 MB / 0.6451 GB, free: 15.25 MB / 474.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.02373/0.6675, allocations: 17.95 MB / 0.6626 GB, free: 13.18 MB / 490.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.5614/1.229, allocations: 16.28 MB / 0.6785 GB, free: 17.36 MB / 490.8 MB Notification: Performance of NFSimplifyModel.simplify: time 0.02722/1.256, allocations: 14.87 MB / 0.693 GB, free: 17.06 MB / 490.8 MB Notification: Performance of NFPackage.collectConstants: time 0.009468/1.266, allocations: 1.688 MB / 0.6947 GB, free: 17.06 MB / 490.8 MB Notification: Performance of NFFlatten.collectFunctions: time 0.03843/1.304, allocations: 9.045 MB / 0.7035 GB, free: 17.05 MB / 490.8 MB Notification: Performance of NFScalarize.scalarize: time 0.01589/1.32, allocations: 5.392 MB / 0.7088 GB, free: 16.46 MB / 490.8 MB Notification: Performance of NFVerifyModel.verify: time 0.03538/1.356, allocations: 10.5 MB / 0.719 GB, free: 14.09 MB / 490.8 MB Notification: Performance of NFConvertDAE.convert: time 0.06888/1.425, allocations: 41.84 MB / 0.7599 GB, free: 0.9922 MB / 490.8 MB Notification: Performance of FrontEnd - DAE generated: time 7.974e-06/1.425, allocations: 4.734 kB / 0.7599 GB, free: 0.9883 MB / 490.8 MB Notification: Performance of FrontEnd: time 1.583e-06/1.425, allocations: 2.375 kB / 0.7599 GB, free: 0.9883 MB / 490.8 MB Notification: Performance of Transformations before backend: time 0.001126/1.426, allocations: 0 / 0.7599 GB, free: 0.9883 MB / 490.8 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 3808 * Number of variables: 3808 Notification: Performance of Generate backend data structure: time 0.09524/1.521, allocations: 24.81 MB / 0.7841 GB, free: 14.89 MB / 0.5105 GB Notification: Performance of prepare preOptimizeDAE: time 5.188e-05/1.521, allocations: 8.031 kB / 0.7841 GB, free: 14.88 MB / 0.5105 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02673/1.548, allocations: 3.883 MB / 0.7879 GB, free: 10.99 MB / 0.5105 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.03321/1.581, allocations: 11.85 MB / 0.7995 GB, free: 15.54 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002522/1.584, allocations: 2.181 MB / 0.8016 GB, free: 13.15 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.01155/1.595, allocations: 1.532 MB / 0.8031 GB, free: 11.62 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.1013/1.697, allocations: 34.89 MB / 0.8372 GB, free: 8.508 MB / 0.5574 GB Notification: Performance of preOpt findStateOrder (simulation): time 0.0007361/1.697, allocations: 10.56 kB / 0.8372 GB, free: 8.504 MB / 0.5574 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.01139/1.709, allocations: 0.5859 MB / 0.8378 GB, free: 7.918 MB / 0.5574 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003394/1.709, allocations: 360 kB / 0.8381 GB, free: 7.566 MB / 0.5574 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1014/1.811, allocations: 46.93 MB / 0.884 GB, free: 8.645 MB / 0.6043 GB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.5333/2.344, allocations: 128.4 MB / 1.009 GB, free: 140.7 MB / 0.6043 GB Notification: Performance of preOpt comSubExp (simulation): time 0.8695/3.213, allocations: 276.1 MB / 1.279 GB, free: 128.5 MB / 0.6043 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.03728/3.251, allocations: 19.91 MB / 1.298 GB, free: 114.5 MB / 0.6043 GB Notification: Performance of preOpt evalFunc (simulation): time 0.1682/3.419, allocations: 87.75 MB / 1.384 GB, free: 28.38 MB / 0.6043 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 8.771e-05/3.419, allocations: 143.1 kB / 1.384 GB, free: 28.24 MB / 0.6043 GB Notification: Performance of preOpt simplifyInStream (simulation): time 0.02337/3.442, allocations: 4.529 MB / 1.389 GB, free: 23.82 MB / 0.6043 GB Notification: Performance of pre-optimization done (n=995): time 4.814e-05/3.443, allocations: 0 / 1.389 GB, free: 23.82 MB / 0.6043 GB Notification: Performance of matching and sorting (n=1129): time 1.003/4.446, allocations: 140.7 MB / 1.526 GB, free: 153.2 MB / 0.6043 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001001/4.446, allocations: 168.2 kB / 1.526 GB, free: 153 MB / 0.6043 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.01789/4.464, allocations: 10.15 MB / 1.536 GB, free: 142.9 MB / 0.6043 GB Notification: Performance of collectPreVariables (initialization): time 0.005141/4.469, allocations: 209.7 kB / 1.536 GB, free: 142.7 MB / 0.6043 GB Notification: Performance of collectInitialEqns (initialization): time 0.005565/4.475, allocations: 6.886 MB / 1.543 GB, free: 135.8 MB / 0.6043 GB Notification: Performance of collectInitialBindings (initialization): time 0.008616/4.483, allocations: 3.914 MB / 1.547 GB, free: 131.9 MB / 0.6043 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.01833/4.502, allocations: 3.256 MB / 1.55 GB, free: 128.7 MB / 0.6043 GB Notification: Performance of setup shared object (initialization): time 6.042e-05/4.502, allocations: 313 kB / 1.55 GB, free: 128.4 MB / 0.6043 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.02353/4.525, allocations: 11.92 MB / 1.562 GB, free: 116.4 MB / 0.6043 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0305/4.556, allocations: 16.66 MB / 1.578 GB, free: 97.76 MB / 0.6043 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.05637/4.612, allocations: 29.93 MB / 1.608 GB, free: 65.71 MB / 0.6043 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0001705/4.613, allocations: 48 kB / 1.608 GB, free: 65.66 MB / 0.6043 GB Notification: Performance of matching and sorting (n=1889) (initialization): time 0.8045/5.417, allocations: 84.95 MB / 1.691 GB, free: 170.1 MB / 0.6043 GB Notification: Performance of prepare postOptimizeDAE: time 0.0001639/5.417, allocations: 65.97 kB / 1.691 GB, free: 170.1 MB / 0.6043 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0003816/5.418, allocations: 149.4 kB / 1.691 GB, free: 170.1 MB / 0.6043 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.06123/5.479, allocations: 22.94 MB / 1.713 GB, free: 158.9 MB / 0.6043 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01808/5.497, allocations: 3.726 MB / 1.717 GB, free: 157 MB / 0.6043 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.1978/5.695, allocations: 89.89 MB / 1.805 GB, free: 66.81 MB / 0.6043 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.02085/5.716, allocations: 1.191 MB / 1.806 GB, free: 65.65 MB / 0.6043 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.006135/5.722, allocations: 0.9367 MB / 1.807 GB, free: 64.71 MB / 0.6043 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 677 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (1841): * Single equations (assignments): 1838 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of prepare postOptimizeDAE: time 0.01862/5.741, allocations: 5.369 MB / 1.812 GB, free: 59.33 MB / 0.6043 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.008527/5.749, allocations: 1.064 MB / 1.813 GB, free: 58.83 MB / 0.6043 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.6877/6.437, allocations: 52.1 MB / 1.864 GB, free: 175.1 MB / 0.6043 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0002142/6.437, allocations: 120.8 kB / 1.864 GB, free: 175.1 MB / 0.6043 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0001594/6.438, allocations: 18 kB / 1.864 GB, free: 175.1 MB / 0.6043 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0004145/6.438, allocations: 65.75 kB / 1.864 GB, free: 175.1 MB / 0.6043 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.388/6.826, allocations: 76.55 MB / 1.939 GB, free: 142.1 MB / 0.6043 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001047/6.826, allocations: 4.438 kB / 1.939 GB, free: 142.1 MB / 0.6043 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.01384/6.84, allocations: 2.423 MB / 1.941 GB, free: 141.3 MB / 0.6043 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.0342/6.874, allocations: 12.46 MB / 1.953 GB, free: 129.1 MB / 0.6043 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.003795/6.878, allocations: 476.3 kB / 1.954 GB, free: 128.6 MB / 0.6043 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.1481/7.026, allocations: 43.6 MB / 1.996 GB, free: 84.68 MB / 0.6043 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.097e-06/7.026, allocations: 7.938 kB / 1.996 GB, free: 84.68 MB / 0.6043 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.7603/7.786, allocations: 148.8 MB / 2.142 GB, free: 123.5 MB / 0.6043 GB Notification: Performance of postOpt removeConstants (simulation): time 0.01142/7.798, allocations: 3.305 MB / 2.145 GB, free: 121.9 MB / 0.6043 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.006435/7.804, allocations: 296.4 kB / 2.145 GB, free: 121.8 MB / 0.6043 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01588/7.82, allocations: 0.838 MB / 2.146 GB, free: 121.6 MB / 0.6043 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.007962/7.828, allocations: 1.495 MB / 2.148 GB, free: 121.4 MB / 0.6043 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.004014/7.832, allocations: 472.7 kB / 2.148 GB, free: 121.3 MB / 0.6043 GB Notification: Performance of sorting global known variables: time 0.01414/7.846, allocations: 6.963 MB / 2.155 GB, free: 118.9 MB / 0.6043 GB Notification: Performance of sort global known variables: time 8.32e-07/7.847, allocations: 2.516 kB / 2.155 GB, free: 118.9 MB / 0.6043 GB Notification: Performance of remove unused functions: time 0.05568/7.902, allocations: 8.263 MB / 2.163 GB, free: 118 MB / 0.6043 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 15 * Number of states: 60 (solution.temperature,O2_free.logn,H2O.logn,relaxed.OxyHm[1].logn,relaxed.OxyHm[2].logn,relaxed.OxyHm[3].logn,relaxed.OxyHm[4].logn,relaxed.DeoxyHm[1].logn,relaxed.DeoxyHm[2].logn,relaxed.DeoxyHm[3].logn,relaxed.DeoxyHm[4].logn,relaxed.HmAH[1].logn,relaxed.HmAH[2].logn,relaxed.HmAH[3].logn,relaxed.HmAH[4].logn,relaxed.HmA[1].logn,relaxed.HmA[2].logn,relaxed.HmA[3].logn,relaxed.HmA[4].logn,relaxed.HmNH3[1].logn,relaxed.HmNH3[2].logn,relaxed.HmNH3[3].logn,relaxed.HmNH3[4].logn,relaxed.HmNH2[1].logn,relaxed.HmNH2[2].logn,relaxed.HmNH2[3].logn,relaxed.HmNH2[4].logn,relaxed.HmNHCOO[1].logn,relaxed.HmNHCOO[2].logn,relaxed.HmNHCOO[3].logn,relaxed.HmNHCOO[4].logn,tensed.OxyHm[1].logn,tensed.OxyHm[2].logn,tensed.OxyHm[3].logn,tensed.OxyHm[4].logn,tensed.DeoxyHm[1].logn,tensed.DeoxyHm[2].logn,tensed.DeoxyHm[3].logn,tensed.DeoxyHm[4].logn,tensed.HmAH[1].logn,tensed.HmAH[2].logn,tensed.HmAH[3].logn,tensed.HmAH[4].logn,tensed.HmA[1].logn,tensed.HmA[2].logn,tensed.HmA[3].logn,tensed.HmA[4].logn,tensed.HmNH3[1].logn,tensed.HmNH3[2].logn,tensed.HmNH3[3].logn,tensed.HmNH3[4].logn,tensed.HmNH2[1].logn,tensed.HmNH2[2].logn,tensed.HmNH2[3].logn,tensed.HmNH2[4].logn,tensed.HmNHCOO[1].logn,tensed.HmNHCOO[2].logn,tensed.HmNHCOO[3].logn,tensed.HmNHCOO[4].logn,CO2_free.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (1234): * Single equations (assignments): 1231 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of Backend phase and start with SimCode phase: time 0.01335/7.916, allocations: 3.508 MB / 2.166 GB, free: 115.8 MB / 0.6043 GB Notification: Performance of simCode: created initialization part: time 0.07576/7.991, allocations: 28.17 MB / 2.194 GB, free: 92.36 MB / 0.6043 GB Notification: Performance of simCode: created event and clocks part: time 1.592e-05/7.991, allocations: 0 / 2.194 GB, free: 92.36 MB / 0.6043 GB Notification: Performance of simCode: created simulation system equations: time 0.04722/8.039, allocations: 15.22 MB / 2.209 GB, free: 79.25 MB / 0.6043 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.02311/8.062, allocations: 2.337 MB / 2.211 GB, free: 77.12 MB / 0.6043 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.3679/8.43, allocations: 53.13 MB / 2.263 GB, free: 156.7 MB / 0.6043 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.01652/8.446, allocations: 10.24 MB / 2.273 GB, free: 155.6 MB / 0.6043 GB Notification: Performance of simCode: alias equations: time 0.02116/8.468, allocations: 5.538 MB / 2.278 GB, free: 155.5 MB / 0.6043 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.00901/8.477, allocations: 1.53 MB / 2.28 GB, free: 155.5 MB / 0.6043 GB Notification: Performance of SimCode: time 1.673e-06/8.477, allocations: 0 / 2.28 GB, free: 155.5 MB / 0.6043 GB Notification: Performance of Templates: time 0.7893/9.266, allocations: 357.6 MB / 2.629 GB, free: 55.45 MB / 0.6043 GB make -j1 -f Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.makefile (rm -f Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; mkfifo Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.pipe >> ../files/Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.sim & ./Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation -abortSlowSimulation -alarm=480 -lv LOG_STATS > Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinCarboxylation.pipe 2>&1)