startTime=0 stopTime=3 tolerance=1e-06 numberOfIntervals=2500 stepSize=0.0012 Regular simulation: ./Physiolibrary_Physiolibrary.Chemical.Examples.AcidBase.CarbonDioxideInBlood -abortSlowSimulation -alarm=480 -lv LOG_STATS stdout | info | Using sparse solver for linear system 10, | | | | because density of 0.100 remains under threshold of 0.200. stdout | info | The maximum density for using sparse solvers can be specified | | | | using the runtime flag '<-lssMaxDensity=value>'. assert | warning | The following assertion has been violated at time 0.000000 | | | | blood_erythrocytes.mass >= 0.0 and blood_erythrocytes.mass <= 0.0 assert | warning | Variable violating min/max constraint: 0.0 <= blood_erythrocytes.mass <= 0.0, has value: 1.04337 assert | warning | The following assertion has been violated at time 0.000000 | | | | blood_plasma.mass >= 0.0 and blood_plasma.mass <= 0.0 assert | warning | Variable violating min/max constraint: 0.0 <= blood_plasma.mass <= 0.0, has value: 1.02573 assert | warning | The following assertion has been violated at time 0.000000 | | | | H2O.SelfClustering_K >= 0.0 and H2O.SelfClustering_K <= 1.0 assert | warning | Variable violating min/max constraint: 0.0 <= H2O.SelfClustering_K <= 1.0, has value: 53.6279 assert | warning | The following assertion has been violated at time 0.000000 | | | | H2O_E.SelfClustering_K >= 0.0 and H2O_E.SelfClustering_K <= 1.0 assert | warning | Variable violating min/max constraint: 0.0 <= H2O_E.SelfClustering_K <= 1.0, has value: 53.6279 assert | warning | The following assertion has been violated at time 0.000000 | | | | H_E.solution.n >= 0.0 and H_E.solution.n <= 0.0 assert | warning | Variable violating min/max constraint: 0.0 <= H_E.solution.n <= 0.0, has value: 1.07401 assert | warning | The following assertion has been violated at time 0.000000 | | | | H_E.solution.mj >= 0.0 assert | warning | Variable violating min constraint: 0.0 <= H_E.solution.mj, has value: -0.000456775 assert | warning | The following assertion has been violated at time 0.000000 | | | | H_E.solution.Ij >= 0.0 and H_E.solution.Ij <= 1.0 assert | warning | Variable violating min/max constraint: 0.0 <= H_E.solution.Ij <= 1.0, has value: -0.2268 assert | warning | The following assertion has been violated at time 0.000000 | | | | others_E.solution.I >= 0.0 and others_E.solution.I <= 0.0 assert | warning | Variable violating min/max constraint: 0.0 <= others_E.solution.I <= 0.0, has value: -0.19605 assert | warning | The following assertion has been violated at time 0.000000 | | | | H.solution.n >= 0.0 and H.solution.n <= 0.0 assert | warning | Variable violating min/max constraint: 0.0 <= H.solution.n <= 0.0, has value: 1.44186 assert | warning | The following assertion has been violated at time 0.000000 | | | | H.solution.mj >= 0.0 assert | warning | Variable violating min constraint: 0.0 <= H.solution.mj, has value: -5.73789e-05 assert | warning | The following assertion has been violated at time 0.000000 | | | | H.solution.I >= 0.0 and H.solution.I <= 0.0 assert | warning | Variable violating min/max constraint: 0.0 <= H.solution.I <= 0.0, has value: 0.03501 assert | warning | The following assertion has been violated at time 0.000000 | | | | H.solution.Ij >= 0.0 and H.solution.Ij <= 1.0 assert | warning | Variable violating min/max constraint: 0.0 <= H.solution.Ij <= 1.0, has value: -0.02849 LOG_SUCCESS | info | The initialization finished successfully without homotopy method. LOG_STATS | info | ### STATISTICS ### | | | | | timer | | | | | | 0.0138013s reading init.xml | | | | | | 0.00160888s reading info.xml | | | | | | 0.0001763s [ 0.0%] pre-initialization | | | | | | 0.000498745s [ 0.1%] initialization | | | | | | 2.1681e-05s [ 0.0%] steps | | | | | | 0.00414831s [ 1.0%] solver (excl. callbacks) | | | | | | 0s [ 0.0%] creating output-file | | | | | | 0.236189s [ 56.9%] event-handling | | | | | | 0.0235244s [ 5.7%] overhead | | | | | | 0.150468s [ 36.3%] simulation | | | | | | 0.415027s [100.0%] total | | | | | events | | | | | | 23 state events | | | | | | 0 time events | | | | | solver: dassl | | | | | | 274 steps taken | | | | | | 371 calls of functionODE | | | | | | 145 evaluations of jacobian | | | | | | 5 error test failures | | | | | | 0 convergence test failures | | | | | | 0.0130762s time of jacobian evaluation LOG_SUCCESS | info | The simulation finished successfully.