Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Chemical_Chemical.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package Chemical with version 1.4.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo)
Running command: translateModel(Chemical.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Joels57")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo): time 0.08097/0.08097, allocations: 15.29 MB / 31.08 MB, free: 3.113 MB / 24.77 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001049/0.001049, allocations: 198 kB / 36.14 MB, free: 2.141 MB / 24.77 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.326/1.326, allocations: 222.9 MB / 264 MB, free: 5.062 MB / 202.7 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.0009564/0.0009564, allocations: 98.16 kB / 318.4 MB, free: 3.438 MB / 250.7 MB
Warning: Ignoring unknown experiment annotation option: __Dymola_NumberOfIntervals = 50000
Warning: Ignoring unknown experiment annotation option: __Dymola_Algorithm = "Dassl"
Warning: Ignoring unknown experiment annotation option: __Dymola_NumberOfIntervals = 50000
Warning: Ignoring unknown experiment annotation option: __Dymola_Algorithm = "Dassl"
Notification: Performance of FrontEnd - loaded program: time 0.001011/0.001011, allocations: 54.03 kB / 382.7 MB, free: 49 MB / 298.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.09486/0.09589, allocations: 53.62 MB / 436.3 MB, free: 1.035 MB / 298.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:4721:7-4721:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:4721:7-4721:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer "system" component but
an inner "system" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.Hemoglobin.Joels57): time 0.4869/0.5828, allocations: 87.74 MB / 0.5118 GB, free: 1.68 MB / 378.8 MB
Notification: Performance of NFInst.instExpressions: time 0.5123/1.095, allocations: 214.5 MB / 0.7212 GB, free: 3.051 MB / 0.4949 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01386/1.109, allocations: 310.8 kB / 0.7215 GB, free: 3.051 MB / 0.4949 GB
Notification: Performance of NFTyping.typeComponents: time 0.01495/1.124, allocations: 4.383 MB / 0.7258 GB, free: 3.023 MB / 0.4949 GB
Notification: Performance of NFTyping.typeBindings: time 0.05087/1.175, allocations: 14.86 MB / 0.7403 GB, free: 2.926 MB / 0.4949 GB
Notification: Performance of NFTyping.typeClassSections: time 0.08948/1.264, allocations: 28.55 MB / 0.7682 GB, free: 12.65 MB / 0.5105 GB
Notification: Performance of NFFlatten.flatten: time 0.08317/1.348, allocations: 84.3 MB / 0.8505 GB, free: 10.99 MB / 0.573 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.07332/1.421, allocations: 57.07 MB / 0.9063 GB, free: 3.867 MB / 0.6199 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.6835/2.104, allocations: 48.9 MB / 0.954 GB, free: 32.37 MB / 0.6356 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.08264/2.187, allocations: 44.76 MB / 0.9977 GB, free: 29.41 MB / 0.6356 GB
Notification: Performance of NFPackage.collectConstants: time 0.03512/2.222, allocations: 5.226 MB / 1.003 GB, free: 29.41 MB / 0.6356 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1172/2.34, allocations: 27.36 MB / 1.03 GB, free: 26.96 MB / 0.6356 GB
Notification: Performance of NFScalarize.scalarize: time 0.03433/2.374, allocations: 16.33 MB / 1.046 GB, free: 21.21 MB / 0.6356 GB
Notification: Performance of NFVerifyModel.verify: time 0.0723/2.446, allocations: 32.69 MB / 1.077 GB, free: 0 / 0.6356 GB
Notification: Performance of NFConvertDAE.convert: time 0.8562/3.303, allocations: 139 MB / 1.213 GB, free: 96.11 MB / 0.7296 GB
Notification: Performance of FrontEnd - DAE generated: time 6.412e-06/3.303, allocations: 2.594 kB / 1.213 GB, free: 96.11 MB / 0.7296 GB
Notification: Performance of FrontEnd: time 1.513e-06/3.303, allocations: 0 / 1.213 GB, free: 96.11 MB / 0.7296 GB
Notification: Performance of Transformations before backend: time 0.003894/3.307, allocations: 0 / 1.213 GB, free: 96.11 MB / 0.7296 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.2736/3.58, allocations: 74.69 MB / 1.286 GB, free: 76.07 MB / 0.7296 GB
Notification: Performance of prepare preOptimizeDAE: time 4.029e-05/3.58, allocations: 14.19 kB / 1.286 GB, free: 76.07 MB / 0.7296 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08215/3.662, allocations: 11.67 MB / 1.298 GB, free: 71.62 MB / 0.7296 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1098/3.772, allocations: 39.84 MB / 1.336 GB, free: 51.61 MB / 0.7296 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.006789/3.779, allocations: 6.425 MB / 1.343 GB, free: 44.54 MB / 0.7296 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.04459/3.824, allocations: 4.584 MB / 1.347 GB, free: 39.95 MB / 0.7296 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.2764/4.1, allocations: 111.5 MB / 1.456 GB, free: 7.895 MB / 0.8078 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002022/4.102, allocations: 29.05 kB / 1.456 GB, free: 7.887 MB / 0.8078 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03367/4.136, allocations: 1.768 MB / 1.458 GB, free: 6.125 MB / 0.8078 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0008583/4.137, allocations: 1.055 MB / 1.459 GB, free: 5.07 MB / 0.8078 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.5709/4.708, allocations: 151.1 MB / 1.606 GB, free: 259 MB / 0.8078 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.23/5.938, allocations: 428.2 MB / 2.024 GB, free: 200.9 MB / 0.8078 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.369/8.307, allocations: 0.8165 GB / 2.841 GB, free: 173.3 MB / 0.8078 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.1015/8.408, allocations: 63.94 MB / 2.903 GB, free: 125 MB / 0.8078 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.8166/9.225, allocations: 290.6 MB / 3.187 GB, free: 211 MB / 0.8078 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002009/9.225, allocations: 335.1 kB / 3.188 GB, free: 210.7 MB / 0.8078 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.07313/9.298, allocations: 23.59 MB / 3.211 GB, free: 189.4 MB / 0.8078 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0001452/9.298, allocations: 0 / 3.211 GB, free: 189.4 MB / 0.8078 GB
Notification: Performance of matching and sorting (n=3387): time 2.759/12.06, allocations: 423.6 MB / 3.624 GB, free: 263 MB / 0.8078 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002034/12.06, allocations: 453.8 kB / 3.625 GB, free: 262.9 MB / 0.8078 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.05229/12.11, allocations: 32.12 MB / 3.656 GB, free: 251.6 MB / 0.8078 GB
Notification: Performance of collectPreVariables (initialization): time 0.01303/12.12, allocations: 0.572 MB / 3.657 GB, free: 251.1 MB / 0.8078 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01701/12.14, allocations: 21.11 MB / 3.677 GB, free: 238.9 MB / 0.8078 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02158/12.16, allocations: 11.84 MB / 3.689 GB, free: 229.8 MB / 0.8078 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.04679/12.21, allocations: 9.892 MB / 3.698 GB, free: 225.6 MB / 0.8078 GB
Notification: Performance of setup shared object (initialization): time 4.057e-05/12.21, allocations: 305.1 kB / 3.699 GB, free: 225.3 MB / 0.8078 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.06345/12.27, allocations: 38.99 MB / 3.737 GB, free: 203 MB / 0.8078 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.07361/12.35, allocations: 53.19 MB / 3.789 GB, free: 150.6 MB / 0.8078 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.4622/12.81, allocations: 96.31 MB / 3.883 GB, free: 223.6 MB / 0.8078 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004251/12.81, allocations: 129.7 kB / 3.883 GB, free: 223.6 MB / 0.8078 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.711/14.52, allocations: 257.4 MB / 4.134 GB, free: 234.8 MB / 0.8078 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0004236/14.52, allocations: 196.8 kB / 4.135 GB, free: 234.8 MB / 0.8078 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0009025/14.52, allocations: 445 kB / 4.135 GB, free: 234.8 MB / 0.8078 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.184/14.7, allocations: 73.71 MB / 4.207 GB, free: 216.2 MB / 0.8078 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.05627/14.76, allocations: 11.18 MB / 4.218 GB, free: 214 MB / 0.8078 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.002/15.76, allocations: 296.2 MB / 4.507 GB, free: 180.1 MB / 0.8078 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05894/15.82, allocations: 3.436 MB / 4.511 GB, free: 178.5 MB / 0.8078 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01781/15.84, allocations: 2.797 MB / 4.513 GB, free: 177.5 MB / 0.8078 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.0565/15.9, allocations: 18.35 MB / 4.531 GB, free: 166.6 MB / 0.8078 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02292/15.92, allocations: 3.149 MB / 4.534 GB, free: 166 MB / 0.8078 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 1.178/17.1, allocations: 152.9 MB / 4.684 GB, free: 214.4 MB / 0.8078 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003129/17.1, allocations: 357.2 kB / 4.684 GB, free: 214.4 MB / 0.8078 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.000435/17.1, allocations: 57.72 kB / 4.684 GB, free: 214.4 MB / 0.8078 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0009171/17.1, allocations: 180.3 kB / 4.684 GB, free: 214.4 MB / 0.8078 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.285/18.38, allocations: 238.3 MB / 4.917 GB, free: 207.2 MB / 0.8078 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0004325/18.38, allocations: 15.72 kB / 4.917 GB, free: 207.2 MB / 0.8078 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04531/18.43, allocations: 7.251 MB / 4.924 GB, free: 206.9 MB / 0.8078 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1009/18.53, allocations: 39.74 MB / 4.963 GB, free: 205.1 MB / 0.8078 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01586/18.55, allocations: 1.458 MB / 4.964 GB, free: 205.1 MB / 0.8078 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.3174/18.86, allocations: 143.6 MB / 5.104 GB, free: 118.3 MB / 0.8078 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 8.315e-06/18.86, allocations: 15.94 kB / 5.104 GB, free: 118.3 MB / 0.8078 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 2.491/21.36, allocations: 474.8 MB / 5.568 GB, free: 131.7 MB / 0.8078 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03889/21.39, allocations: 10.95 MB / 5.579 GB, free: 126.4 MB / 0.8078 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01749/21.41, allocations: 0.9189 MB / 5.58 GB, free: 125.8 MB / 0.8078 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.04485/21.46, allocations: 2.373 MB / 5.582 GB, free: 125.2 MB / 0.8078 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02769/21.48, allocations: 4.545 MB / 5.587 GB, free: 124.6 MB / 0.8078 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.013/21.5, allocations: 1.381 MB / 5.588 GB, free: 124.3 MB / 0.8078 GB
Notification: Performance of sorting global known variables: time 0.04223/21.54, allocations: 22.38 MB / 5.61 GB, free: 114.2 MB / 0.8078 GB
Notification: Performance of sort global known variables: time 3.196e-06/21.54, allocations: 0 / 5.61 GB, free: 114.2 MB / 0.8078 GB
Notification: Performance of remove unused functions: time 0.1749/21.71, allocations: 24.95 MB / 5.634 GB, free: 90.48 MB / 0.8078 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.03295/21.75, allocations: 10.27 MB / 5.644 GB, free: 83.64 MB / 0.8078 GB
Notification: Performance of simCode: created initialization part: time 0.5674/22.31, allocations: 90.41 MB / 5.732 GB, free: 190.3 MB / 0.8078 GB
Notification: Performance of simCode: created event and clocks part: time 1.494e-05/22.32, allocations: 7.062 kB / 5.732 GB, free: 190.3 MB / 0.8078 GB
Notification: Performance of simCode: created simulation system equations: time 0.1371/22.45, allocations: 58.31 MB / 5.789 GB, free: 178.9 MB / 0.8078 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.06847/22.52, allocations: 7.327 MB / 5.797 GB, free: 176.5 MB / 0.8078 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.8544/23.38, allocations: 167.6 MB / 5.96 GB, free: 162.6 MB / 0.8078 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.08625/23.46, allocations: 31.51 MB / 5.991 GB, free: 160.3 MB / 0.8078 GB
Notification: Performance of simCode: alias equations: time 0.09219/23.55, allocations: 16.53 MB / 6.007 GB, free: 159.8 MB / 0.8078 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.04352/23.6, allocations: 4.574 MB / 6.012 GB, free: 159.8 MB / 0.8078 GB
Notification: Performance of SimCode: time 1.263e-06/23.6, allocations: 0 / 6.012 GB, free: 159.8 MB / 0.8078 GB
Notification: Performance of Templates: time 3.06/26.66, allocations: 1.081 GB / 7.093 GB, free: 33.11 MB / 0.839 GB
make -j1 -f Chemical_Chemical.Examples.Hemoglobin.Joels57.makefile
(rm -f Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe 2>&1)