Environment - simulationEnvironment:
startTime=0
stopTime=70
tolerance=1e-05
numberOfIntervals=2500
stepSize=0.028
Regular simulation: ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -s gbode -lv LOG_STATS
LOG_STDOUT        | warning | Numerical Jacobians without coloring are currently not supported by GBODE. Colored numerical Jacobian will be used.
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14349:5-14350:37:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_2000.solution.mass >= 0.0 and pCO2_2000.solution.mass <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_2000.solution.mass <= 0.0, has value: 1.00023"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:379:7-381:72:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_2000.H2O.SelfClustering_K >= 0.0 and pCO2_2000.H2O.SelfClustering_K <= 1.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_2000.H2O.SelfClustering_K <= 1.0, has value: 53.6279"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14161:5-14162:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_2000.relaxed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= pCO2_2000.relaxed.speciation.subunitSolution.nj, has value: -5.79377e-07"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14166:5-14167:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_2000.relaxed.solution.mj >= 0.0 and pCO2_2000.relaxed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_2000.relaxed.solution.mj <= 0.0, has value: 1.04376e-08"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14161:5-14162:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_2000.tensed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= pCO2_2000.tensed.speciation.subunitSolution.nj, has value: -0.0119994"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14166:5-14167:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_2000.tensed.solution.mj >= 0.0 and pCO2_2000.tensed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_2000.tensed.solution.mj <= 0.0, has value: 0.000216173"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14160:5-14160:67:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_2000.CO2_free.solution.n >= 0.0 and pCO2_2000.CO2_free.solution.n <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_2000.CO2_free.solution.n <= 0.0, has value: 1.01913"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14349:5-14350:37:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_5330.solution.mass >= 0.0 and pCO2_5330.solution.mass <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_5330.solution.mass <= 0.0, has value: 1.00024"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:379:7-381:72:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_5330.H2O.SelfClustering_K >= 0.0 and pCO2_5330.H2O.SelfClustering_K <= 1.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_5330.H2O.SelfClustering_K <= 1.0, has value: 53.6279"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14161:5-14162:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_5330.relaxed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= pCO2_5330.relaxed.speciation.subunitSolution.nj, has value: -5.79377e-07"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14166:5-14167:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_5330.relaxed.solution.mj >= 0.0 and pCO2_5330.relaxed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_5330.relaxed.solution.mj <= 0.0, has value: 1.04376e-08"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14161:5-14162:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_5330.tensed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= pCO2_5330.tensed.speciation.subunitSolution.nj, has value: -0.0119994"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14166:5-14167:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_5330.tensed.solution.mj >= 0.0 and pCO2_5330.tensed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_5330.tensed.solution.mj <= 0.0, has value: 0.000216173"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14160:5-14160:67:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_5330.CO2_free.solution.n >= 0.0 and pCO2_5330.CO2_free.solution.n <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_5330.CO2_free.solution.n <= 0.0, has value: 1.02081"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14349:5-14350:37:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_9330.solution.mass >= 0.0 and pCO2_9330.solution.mass <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_9330.solution.mass <= 0.0, has value: 1.00026"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:379:7-381:72:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_9330.H2O.SelfClustering_K >= 0.0 and pCO2_9330.H2O.SelfClustering_K <= 1.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_9330.H2O.SelfClustering_K <= 1.0, has value: 53.6279"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14161:5-14162:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_9330.relaxed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= pCO2_9330.relaxed.speciation.subunitSolution.nj, has value: -5.79377e-07"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14166:5-14167:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_9330.relaxed.solution.mj >= 0.0 and pCO2_9330.relaxed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_9330.relaxed.solution.mj <= 0.0, has value: 1.04376e-08"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14161:5-14162:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_9330.tensed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= pCO2_9330.tensed.speciation.subunitSolution.nj, has value: -0.0119994"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14166:5-14167:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_9330.tensed.solution.mj >= 0.0 and pCO2_9330.tensed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_9330.tensed.solution.mj <= 0.0, has value: 0.000216173"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14160:5-14160:67:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((pCO2_9330.CO2_free.solution.n >= 0.0 and pCO2_9330.CO2_free.solution.n <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= pCO2_9330.CO2_free.solution.n <= 0.0, has value: 1.02283"
LOG_SUCCESS       | info    | The initialization finished successfully without homotopy method.
LOG_STATS         | info    | gbode (single-rate integration): esdirk4
LOG_STATS         | info    | ### STATISTICS ###
|                 | |       | | timer
|                 | |       | | |     0.222457s          reading init.xml
|                 | |       | | |    0.0127753s          reading info.xml
|                 | |       | | |   0.00161726s [  0.1%] pre-initialization
|                 | |       | | |   0.00275435s [  0.1%] initialization
|                 | |       | | |  0.000287188s [  0.0%] steps
|                 | |       | | |            0s [  0.0%] solver (excl. callbacks)
|                 | |       | | |            0s [  0.0%] creating output-file
|                 | |       | | |    0.0247561s [  1.0%] event-handling
|                 | |       | | |    0.0598729s [  2.3%] overhead
|                 | |       | | |      2.51519s [ 96.6%] simulation
|                 | |       | | |      2.60448s [100.0%] total
|                 | |       | | events
|                 | |       | | |    83 state events
|                 | |       | | |     0 time events
|                 | |       | | solver: gbode
|                 | |       | | |   528 steps taken
|                 | |       | | | 34853 calls of functionODE
|                 | |       | | |   197 evaluations of jacobian
|                 | |       | | |    46 error test failures
|                 | |       | | |     0 convergence test failures
|                 | |       | | | 0s time of jacobian evaluation
LOG_SUCCESS       | info    | The simulation finished successfully.