Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo", uses=false)
Using package Chemical with version 1.4.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Joels57")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001226/0.001226, allocations: 101.6 kB / 16.35 MB, free: 5.875 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.0013/0.0013, allocations: 191.8 kB / 17.29 MB, free: 5.516 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.333/1.333, allocations: 222.9 MB / 241 MB, free: 15.01 MB / 206.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo): time 0.0896/0.0896, allocations: 15.31 MB / 306.5 MB, free: 15.4 MB / 254.1 MB
Notification: Performance of FrontEnd - loaded program: time 0.001253/0.001253, allocations: 66.25 kB / 371.8 MB, free: 50.75 MB / 302.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1095/0.1108, allocations: 53.61 MB / 425.4 MB, free: 13.28 MB / 302.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4740:7-4740:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4740:7-4740:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer "system" component but
an inner "system" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.Hemoglobin.Joels57): time 0.08253/0.1934, allocations: 81.55 MB / 0.495 GB, free: 11.63 MB / 382.1 MB
Notification: Performance of NFInst.instExpressions: time 0.7618/0.9552, allocations: 216.8 MB / 0.7068 GB, free: 0.7227 MB / 0.4981 GB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0121/0.9673, allocations: 171.1 kB / 0.7069 GB, free: 0.7227 MB / 0.4981 GB
Notification: Performance of NFTyping.typeComponents: time 0.01522/0.9826, allocations: 4.877 MB / 0.7117 GB, free: 0.6797 MB / 0.4981 GB
Notification: Performance of NFTyping.typeBindings: time 0.05176/1.034, allocations: 17.62 MB / 0.7289 GB, free: 368 kB / 0.4981 GB
Notification: Performance of NFTyping.typeClassSections: time 0.08663/1.121, allocations: 32.14 MB / 0.7603 GB, free: 8.938 MB / 0.5137 GB
Notification: Performance of NFFlatten.flatten: time 0.08542/1.206, allocations: 89.2 MB / 0.8474 GB, free: 3.902 MB / 0.5762 GB
Notification: Performance of NFFlatten.resolveConnections: time 0.09728/1.304, allocations: 72.39 MB / 0.9181 GB, free: 13.39 MB / 0.6544 GB
Notification: Performance of NFEvalConstants.evaluate: time 0.6805/1.984, allocations: 55.47 MB / 0.9723 GB, free: 58.75 MB / 0.6544 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.08827/2.073, allocations: 50.41 MB / 1.021 GB, free: 49.25 MB / 0.6544 GB
Notification: Performance of NFPackage.collectConstants: time 0.03875/2.111, allocations: 12.06 MB / 1.033 GB, free: 48.07 MB / 0.6544 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.1221/2.234, allocations: 35 MB / 1.067 GB, free: 17.85 MB / 0.6544 GB
Notification: Performance of NFScalarize.scalarize: time 0.04736/2.281, allocations: 24.21 MB / 1.091 GB, free: 0 / 0.6544 GB
Notification: Performance of NFVerifyModel.verify: time 0.09451/2.376, allocations: 41.76 MB / 1.132 GB, free: 15.77 MB / 0.7013 GB
Notification: Performance of NFConvertDAE.convert: time 0.8815/3.257, allocations: 147.7 MB / 1.276 GB, free: 135 MB / 0.7327 GB
Notification: Performance of FrontEnd - DAE generated: time 6.422e-06/3.257, allocations: 0 / 1.276 GB, free: 135 MB / 0.7327 GB
Notification: Performance of FrontEnd: time 1.714e-06/3.257, allocations: 0 / 1.276 GB, free: 135 MB / 0.7327 GB
Notification: Performance of Transformations before backend: time 0.00348/3.261, allocations: 3.812 kB / 1.276 GB, free: 135 MB / 0.7327 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.3108/3.571, allocations: 74.82 MB / 1.349 GB, free: 98.16 MB / 0.7327 GB
Notification: Performance of prepare preOptimizeDAE: time 4.36e-05/3.571, allocations: 8.031 kB / 1.349 GB, free: 98.15 MB / 0.7327 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.08588/3.657, allocations: 11.69 MB / 1.361 GB, free: 86.41 MB / 0.7327 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.1096/3.767, allocations: 40.58 MB / 1.4 GB, free: 47.27 MB / 0.7327 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005077/3.772, allocations: 6.424 MB / 1.407 GB, free: 40.2 MB / 0.7327 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.03598/3.808, allocations: 4.584 MB / 1.411 GB, free: 35.61 MB / 0.7327 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.6098/4.418, allocations: 111.5 MB / 1.52 GB, free: 225.3 MB / 0.7327 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002509/4.42, allocations: 34.41 kB / 1.52 GB, free: 225.3 MB / 0.7327 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03297/4.453, allocations: 1.757 MB / 1.522 GB, free: 223.9 MB / 0.7327 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0006848/4.454, allocations: 1.057 MB / 1.523 GB, free: 223.9 MB / 0.7327 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.2907/4.745, allocations: 151 MB / 1.67 GB, free: 97.91 MB / 0.7327 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.622/6.367, allocations: 427.3 MB / 2.088 GB, free: 181.7 MB / 0.7327 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.499/8.866, allocations: 0.8165 GB / 2.904 GB, free: 98.5 MB / 0.7327 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.1133/8.98, allocations: 63.95 MB / 2.966 GB, free: 54.42 MB / 0.7327 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.845/9.825, allocations: 290.2 MB / 3.25 GB, free: 87.05 MB / 0.7327 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002212/9.825, allocations: 334 kB / 3.25 GB, free: 86.71 MB / 0.7327 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.4432/10.27, allocations: 23.82 MB / 3.273 GB, free: 228 MB / 0.7327 GB
Notification: Performance of pre-optimization done (n=2985): time 0.0002071/10.27, allocations: 0 / 3.273 GB, free: 228 MB / 0.7327 GB
Notification: Performance of matching and sorting (n=3387): time 2.393/12.66, allocations: 423.6 MB / 3.687 GB, free: 133.5 MB / 0.7327 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002119/12.66, allocations: 453.3 kB / 3.688 GB, free: 133 MB / 0.7327 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0697/12.73, allocations: 32.12 MB / 3.719 GB, free: 101.6 MB / 0.7327 GB
Notification: Performance of collectPreVariables (initialization): time 0.0144/12.75, allocations: 0.5681 MB / 3.719 GB, free: 101 MB / 0.7327 GB
Notification: Performance of collectInitialEqns (initialization): time 0.02241/12.77, allocations: 21.12 MB / 3.74 GB, free: 83.18 MB / 0.7327 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02589/12.79, allocations: 11.82 MB / 3.752 GB, free: 71.45 MB / 0.7327 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.4306/13.22, allocations: 9.896 MB / 3.761 GB, free: 194.5 MB / 0.7327 GB
Notification: Performance of setup shared object (initialization): time 5.762e-05/13.22, allocations: 313.5 kB / 3.762 GB, free: 194.2 MB / 0.7327 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.07689/13.3, allocations: 38.99 MB / 3.8 GB, free: 192.9 MB / 0.7327 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.09054/13.39, allocations: 53.19 MB / 3.852 GB, free: 159.6 MB / 0.7327 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.1729/13.56, allocations: 96.31 MB / 3.946 GB, free: 94.18 MB / 0.7327 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.001027/13.57, allocations: 128.9 kB / 3.946 GB, free: 94.05 MB / 0.7327 GB
Notification: Performance of matching and sorting (n=5667) (initialization): time 1.704/15.27, allocations: 258.9 MB / 4.199 GB, free: 103.3 MB / 0.7327 GB
Notification: Performance of prepare postOptimizeDAE: time 0.000416/15.27, allocations: 197.8 kB / 4.199 GB, free: 103.3 MB / 0.7327 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.000896/15.27, allocations: 445.7 kB / 4.199 GB, free: 103.2 MB / 0.7327 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.1789/15.45, allocations: 73.72 MB / 4.271 GB, free: 29.75 MB / 0.7327 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.4697/15.92, allocations: 11.18 MB / 4.282 GB, free: 161.7 MB / 0.7327 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.094/17.01, allocations: 315.2 MB / 4.59 GB, free: 144 MB / 0.7327 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.05962/17.07, allocations: 2.514 MB / 4.592 GB, free: 144 MB / 0.7327 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01855/17.09, allocations: 2.796 MB / 4.595 GB, free: 144 MB / 0.7327 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 2031
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5523):
 * Single equations (assignments): 5514
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.05874/17.15, allocations: 18.34 MB / 4.613 GB, free: 138.9 MB / 0.7327 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02318/17.17, allocations: 3.153 MB / 4.616 GB, free: 138.9 MB / 0.7327 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.8114/17.99, allocations: 152.8 MB / 4.765 GB, free: 61.32 MB / 0.7327 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0004195/17.99, allocations: 363.9 kB / 4.766 GB, free: 60.96 MB / 0.7327 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0005728/17.99, allocations: 56 kB / 4.766 GB, free: 60.91 MB / 0.7327 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001142/17.99, allocations: 179.3 kB / 4.766 GB, free: 60.73 MB / 0.7327 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 1.376/19.36, allocations: 238.3 MB / 4.999 GB, free: 97.17 MB / 0.7327 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0004531/19.37, allocations: 12 kB / 4.999 GB, free: 97.16 MB / 0.7327 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.04311/19.41, allocations: 7.248 MB / 5.006 GB, free: 89.9 MB / 0.7327 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.09644/19.5, allocations: 39.75 MB / 5.045 GB, free: 50.49 MB / 0.7327 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01726/19.52, allocations: 1.448 MB / 5.046 GB, free: 49.04 MB / 0.7327 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.7935/20.32, allocations: 159.7 MB / 5.202 GB, free: 118.1 MB / 0.7327 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.055e-05/20.32, allocations: 16.12 kB / 5.202 GB, free: 118.1 MB / 0.7327 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 1.391/21.71, allocations: 200.6 MB / 5.398 GB, free: 122.5 MB / 0.7327 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.04242/21.75, allocations: 10.95 MB / 5.409 GB, free: 118.6 MB / 0.7327 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.02185/21.77, allocations: 0.9129 MB / 5.41 GB, free: 118 MB / 0.7327 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.04467/21.82, allocations: 1.577 MB / 5.411 GB, free: 117.6 MB / 0.7327 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.02993/21.85, allocations: 4.57 MB / 5.416 GB, free: 116.9 MB / 0.7327 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.01498/21.86, allocations: 1.384 MB / 5.417 GB, free: 116.6 MB / 0.7327 GB
Notification: Performance of sorting global known variables: time 0.05856/21.92, allocations: 22.38 MB / 5.439 GB, free: 108.4 MB / 0.7327 GB
Notification: Performance of sort global known variables: time 7.31e-07/21.92, allocations: 0.9062 kB / 5.439 GB, free: 108.4 MB / 0.7327 GB
Notification: Performance of remove unused functions: time 0.1152/22.03, allocations: 20.11 MB / 5.458 GB, free: 106.3 MB / 0.7327 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3702):
 * Single equations (assignments): 3693
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.03812/22.07, allocations: 10.55 MB / 5.469 GB, free: 104.1 MB / 0.7327 GB
Notification: Performance of simCode: created initialization part: time 0.2424/22.32, allocations: 89.52 MB / 5.556 GB, free: 43.15 MB / 0.7327 GB
Notification: Performance of simCode: created event and clocks part: time 2.121e-05/22.32, allocations: 0 / 5.556 GB, free: 43.15 MB / 0.7327 GB
Notification: Performance of simCode: created simulation system equations: time 0.5528/22.87, allocations: 59.54 MB / 5.614 GB, free: 158.3 MB / 0.7327 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.07539/22.94, allocations: 7.835 MB / 5.622 GB, free: 157.5 MB / 0.7327 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.3577/23.3, allocations: 121.3 MB / 5.74 GB, free: 130.2 MB / 0.7327 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.09137/23.39, allocations: 30.6 MB / 5.77 GB, free: 113.3 MB / 0.7327 GB
Notification: Performance of simCode: alias equations: time 0.07163/23.46, allocations: 15.61 MB / 5.786 GB, free: 102.3 MB / 0.7327 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0302/23.5, allocations: 4.321 MB / 5.79 GB, free: 98.69 MB / 0.7327 GB
Notification: Performance of SimCode: time 1.543e-06/23.5, allocations: 0 / 5.79 GB, free: 98.69 MB / 0.7327 GB
Notification: Performance of Templates: time 3.718/27.21, allocations: 0.9874 GB / 6.777 GB, free: 215.2 MB / 0.8108 GB
make -j1 -f Chemical_Chemical.Examples.Hemoglobin.Joels57.makefile
(rm -f Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Examples.Hemoglobin.Joels57  -abortSlowSimulation -alarm=480 -s gbode -lv LOG_STATS > Chemical_Chemical.Examples.Hemoglobin.Joels57.pipe 2>&1)