Environment - simulationEnvironment:
startTime=0
stopTime=15000
tolerance=1e-06
numberOfIntervals=2500
stepSize=6
Regular simulation: ./Chemical_Chemical.Examples.Hemoglobin.HemoglobinMultipleAllosteryCO  -abortSlowSimulation -alarm=480 -s gbode -lv LOG_STATS
LOG_STDOUT        | warning | Numerical Jacobians without coloring are currently not supported by GBODE. Colored numerical Jacobian will be used.
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4752:5-4753:37:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((solution.mass >= 0.0 and solution.mass <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= solution.mass <= 0.0, has value: 1.00022"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:383:7-385:72:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((H2O.SelfClustering_K >= 0.0 and H2O.SelfClustering_K <= 1.0)) --> "Variable violating min/max constraint: 0.0 <= H2O.SelfClustering_K <= 1.0, has value: 53.6279"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4563:5-4564:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((relaxed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= relaxed.speciation.subunitSolution.nj, has value: -5.79377e-07"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4568:5-4569:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((relaxed.solution.mj >= 0.0 and relaxed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= relaxed.solution.mj <= 0.0, has value: 1.04376e-08"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4563:5-4564:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((tensed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= tensed.speciation.subunitSolution.nj, has value: -0.0119994"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4568:5-4569:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((tensed.solution.mj >= 0.0 and tensed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= tensed.solution.mj <= 0.0, has value: 0.000216173"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1-master/package.mo:4562:5-4562:67:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((CO_free.solution.n >= 0.0 and CO_free.solution.n <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= CO_free.solution.n <= 0.0, has value: 1.01812"
LOG_SUCCESS       | info    | The initialization finished successfully without homotopy method.
LOG_STDOUT        | info    | Chattering detected around time 1.01213225563e-10..2.29324716124 (100 state events in a row with a total time delta less than the step size 3). This can be a performance bottleneck. Use -lv LOG_EVENTS for more information. The zero-crossing was: CO_free.q > 0.0
LOG_ASSERT        | debug   | Aborting simulation due to chattering being detected and the simulation flags requesting we do not continue further.