Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false) Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel") translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001557/0.001557, allocations: 115.9 kB / 16.37 MB, free: 6.004 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001661/0.001661, allocations: 192.8 kB / 17.31 MB, free: 5.613 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.307/1.307, allocations: 222.9 MB / 241 MB, free: 15.16 MB / 206.1 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.0625/0.0625, allocations: 12.28 MB / 303.4 MB, free: 3.238 MB / 238.1 MB Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl" Notification: Performance of FrontEnd - loaded program: time 0.001154/0.001155, allocations: 63.84 kB / 367.2 MB, free: 3.375 MB / 302.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1955/0.1967, allocations: 52.08 MB / 419.3 MB, free: 21.68 MB / 302.1 MB Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.009046/0.2058, allocations: 8.725 MB / 428 MB, free: 12.94 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.004214/0.21, allocations: 2.363 MB / 430.4 MB, free: 10.6 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.001271/0.2113, allocations: 116 kB / 430.5 MB, free: 10.49 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0009056/0.2122, allocations: 381 kB / 430.9 MB, free: 10.11 MB / 302.1 MB Notification: Performance of NFTyping.typeBindings: time 0.001204/0.2135, allocations: 0.5226 MB / 431.4 MB, free: 9.598 MB / 302.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.0009583/0.2144, allocations: 0.5743 MB / 432 MB, free: 9.023 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.001427/0.2159, allocations: 2.332 MB / 434.3 MB, free: 6.68 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001176/0.2171, allocations: 1.284 MB / 435.6 MB, free: 5.355 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.0008183/0.2179, allocations: 0.9463 MB / 436.5 MB, free: 4.406 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.0007444/0.2186, allocations: 1.086 MB / 437.6 MB, free: 3.316 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 0.0002389/0.2189, allocations: 321.2 kB / 437.9 MB, free: 3.004 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0002465/0.2191, allocations: 316 kB / 438.2 MB, free: 2.695 MB / 302.1 MB Notification: Performance of NFScalarize.scalarize: time 0.000261/0.2194, allocations: 0.5766 MB / 438.8 MB, free: 2.117 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 0.0006773/0.2201, allocations: 1.26 MB / 440.1 MB, free: 0.8516 MB / 302.1 MB Notification: Performance of NFConvertDAE.convert: time 0.00236/0.2225, allocations: 3.433 MB / 443.5 MB, free: 13.41 MB / 318.1 MB Notification: Performance of FrontEnd - DAE generated: time 3.878e-06/0.2225, allocations: 3.562 kB / 443.5 MB, free: 13.41 MB / 318.1 MB Notification: Performance of FrontEnd: time 1.233e-06/0.2225, allocations: 0 / 443.5 MB, free: 13.41 MB / 318.1 MB Notification: Performance of Transformations before backend: time 3.669e-05/0.2225, allocations: 0 / 443.5 MB, free: 13.41 MB / 318.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 687 * Number of variables: 687 Notification: Performance of Generate backend data structure: time 0.003748/0.2263, allocations: 2.351 MB / 445.9 MB, free: 11.01 MB / 318.1 MB Notification: Performance of prepare preOptimizeDAE: time 3.349e-05/0.2263, allocations: 8.031 kB / 445.9 MB, free: 11 MB / 318.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0003119/0.2267, allocations: 238.1 kB / 446.1 MB, free: 10.77 MB / 318.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003401/0.227, allocations: 417.2 kB / 446.5 MB, free: 10.32 MB / 318.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002311/0.2272, allocations: 257.4 kB / 446.8 MB, free: 10.05 MB / 318.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003187/0.2276, allocations: 284.1 kB / 447 MB, free: 9.777 MB / 318.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.003695/0.2313, allocations: 2.393 MB / 449.4 MB, free: 7.297 MB / 318.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 7.17e-05/0.2314, allocations: 7.906 kB / 449.4 MB, free: 7.289 MB / 318.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001747/0.2315, allocations: 112 kB / 449.5 MB, free: 7.18 MB / 318.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 4.671e-05/0.2316, allocations: 68 kB / 449.6 MB, free: 7.113 MB / 318.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002986/0.2346, allocations: 1.679 MB / 451.3 MB, free: 5.422 MB / 318.1 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01113/0.2457, allocations: 8.364 MB / 459.6 MB, free: 12.75 MB / 334.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.002084/0.2478, allocations: 1.58 MB / 461.2 MB, free: 11.05 MB / 334.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.000857/0.2487, allocations: 0.5455 MB / 461.8 MB, free: 10.49 MB / 334.1 MB Notification: Performance of preOpt evalFunc (simulation): time 7.275e-05/0.2488, allocations: 21.31 kB / 461.8 MB, free: 10.46 MB / 334.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.588e-05/0.2488, allocations: 47.88 kB / 461.8 MB, free: 10.41 MB / 334.1 MB Notification: Performance of pre-optimization done (n=139): time 3.156e-06/0.2488, allocations: 0 / 461.8 MB, free: 10.41 MB / 334.1 MB Notification: Performance of matching and sorting (n=171): time 0.02328/0.2721, allocations: 9.118 MB / 471 MB, free: 1.238 MB / 334.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 9.086e-05/0.2722, allocations: 175.5 kB / 471.1 MB, free: 1.031 MB / 334.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0005122/0.2728, allocations: 485.7 kB / 471.6 MB, free: 0.5508 MB / 334.1 MB Notification: Performance of collectPreVariables (initialization): time 7.955e-05/0.2728, allocations: 53.7 kB / 471.7 MB, free: 0.4922 MB / 334.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0005539/0.2734, allocations: 0.9527 MB / 472.6 MB, free: 15.52 MB / 350.1 MB Notification: Performance of collectInitialBindings (initialization): time 0.0004477/0.2739, allocations: 0.6238 MB / 473.2 MB, free: 14.89 MB / 350.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004552/0.2743, allocations: 351.9 kB / 473.6 MB, free: 14.54 MB / 350.1 MB Notification: Performance of setup shared object (initialization): time 0.0001077/0.2744, allocations: 325.9 kB / 473.9 MB, free: 14.21 MB / 350.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.001179/0.2756, allocations: 0.6654 MB / 474.6 MB, free: 13.55 MB / 350.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.001612/0.2772, allocations: 1.184 MB / 475.7 MB, free: 12.09 MB / 350.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.01605/0.2933, allocations: 4.729 MB / 480.5 MB, free: 7.094 MB / 350.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.045e-05/0.2933, allocations: 4 kB / 480.5 MB, free: 7.09 MB / 350.1 MB Notification: Performance of matching and sorting (n=291) (initialization): time 0.003435/0.2968, allocations: 2.109 MB / 482.6 MB, free: 4.973 MB / 350.1 MB Notification: Performance of prepare postOptimizeDAE: time 2.748e-05/0.2968, allocations: 16.91 kB / 482.6 MB, free: 4.957 MB / 350.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.48e-05/0.2969, allocations: 20 kB / 482.6 MB, free: 4.938 MB / 350.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 3.673e-05/0.2969, allocations: 35.94 kB / 482.7 MB, free: 4.902 MB / 350.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002559/0.2995, allocations: 0.6436 MB / 483.3 MB, free: 4.258 MB / 350.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 4.203e-05/0.2995, allocations: 43.86 kB / 483.3 MB, free: 4.215 MB / 350.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0008307/0.3004, allocations: 83.95 kB / 483.4 MB, free: 4.133 MB / 350.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001297/0.3005, allocations: 92 kB / 483.5 MB, free: 4.043 MB / 350.1 MB Warning: Assuming fixed start value for the following 41 variables: V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = 0.0 start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real EndogenousGlucoseProduction.I_po.c:VARIABLE(min = 0.0 start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real BetaCell.Y.c:VARIABLE(min = 0.0 start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer ) "Compartment volume" type: Real adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = 0.0 start = 2.34e12 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = 0.0 start = 1.61e10 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = 0.0 start = 1.68e7 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = 0.0 start = 5.8e8 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer ) "Current concentration of substance (mM)" type: Real adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true ) type: Real PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer ) "Number of moles of substance in pool (mol)" type: Real Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 86 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (291): * Single equations (assignments): 291 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0009688/0.3015, allocations: 0.5986 MB / 484.1 MB, free: 3.461 MB / 350.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002399/0.3017, allocations: 98.81 kB / 484.2 MB, free: 3.363 MB / 350.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002522/0.3042, allocations: 1.436 MB / 485.6 MB, free: 1.914 MB / 350.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.624e-05/0.3043, allocations: 20 kB / 485.7 MB, free: 1.895 MB / 350.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 8.456e-06/0.3043, allocations: 0 / 485.7 MB, free: 1.895 MB / 350.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.688e-05/0.3043, allocations: 11.97 kB / 485.7 MB, free: 1.883 MB / 350.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.006306/0.3106, allocations: 3.589 MB / 489.3 MB, free: 14.22 MB / 366.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 6.212e-06/0.3106, allocations: 0 / 489.3 MB, free: 14.22 MB / 366.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002458/0.3131, allocations: 483.5 kB / 489.7 MB, free: 13.75 MB / 366.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 9.909e-06/0.3131, allocations: 4 kB / 489.7 MB, free: 13.75 MB / 366.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001407/0.3133, allocations: 63.91 kB / 489.8 MB, free: 13.68 MB / 366.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.11e-05/0.3133, allocations: 8 kB / 489.8 MB, free: 13.68 MB / 366.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.426e-06/0.3133, allocations: 3.938 kB / 489.8 MB, free: 13.67 MB / 366.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003536/0.3168, allocations: 2.51 MB / 492.3 MB, free: 11.14 MB / 366.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0001518/0.317, allocations: 152 kB / 492.5 MB, free: 10.97 MB / 366.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001541/0.3172, allocations: 47.94 kB / 492.5 MB, free: 10.93 MB / 366.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0007776/0.3179, allocations: 43.97 kB / 492.6 MB, free: 10.88 MB / 366.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001967/0.3182, allocations: 113.1 kB / 492.7 MB, free: 10.77 MB / 366.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001006/0.3183, allocations: 51.97 kB / 492.7 MB, free: 10.72 MB / 366.1 MB Notification: Performance of sorting global known variables: time 0.0003003/0.3186, allocations: 302.9 kB / 493 MB, free: 10.42 MB / 366.1 MB Notification: Performance of sort global known variables: time 1.5e-07/0.3186, allocations: 0 / 493 MB, free: 10.42 MB / 366.1 MB Notification: Performance of remove unused functions: time 0.001297/0.3199, allocations: 428 kB / 493.4 MB, free: 10 MB / 366.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 7 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (173): * Single equations (assignments): 173 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001856/0.3201, allocations: 156.7 kB / 493.6 MB, free: 9.848 MB / 366.1 MB Notification: Performance of simCode: created initialization part: time 0.002677/0.3228, allocations: 1.652 MB / 495.2 MB, free: 8.199 MB / 366.1 MB Notification: Performance of simCode: created event and clocks part: time 2.224e-06/0.3228, allocations: 0 / 495.2 MB, free: 8.199 MB / 366.1 MB Notification: Performance of simCode: created simulation system equations: time 0.001177/0.324, allocations: 0.7572 MB / 496 MB, free: 7.441 MB / 366.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001131/0.3251, allocations: 233.2 kB / 496.2 MB, free: 7.223 MB / 366.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.007366/0.3325, allocations: 4.861 MB / 0.4893 GB, free: 2.312 MB / 366.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0009727/0.3335, allocations: 1.37 MB / 0.4907 GB, free: 0.9023 MB / 366.1 MB Notification: Performance of simCode: alias equations: time 0.0007784/0.3343, allocations: 161.5 kB / 0.4908 GB, free: 0.7422 MB / 366.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003781/0.3346, allocations: 115.3 kB / 0.4909 GB, free: 0.6289 MB / 366.1 MB Notification: Performance of SimCode: time 5.41e-07/0.3346, allocations: 0 / 0.4909 GB, free: 0.6289 MB / 366.1 MB Notification: Performance of Templates: time 0.02678/0.3614, allocations: 16.04 MB / 0.5066 GB, free: 0.7578 MB / 382.1 MB make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile (rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel -abortSlowSimulation -alarm=480 -s gbode -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)