Environment - simulationEnvironment: startTime=0 stopTime=15000 tolerance=1e-06 numberOfIntervals=2500 stepSize=6 Regular simulation: ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery -abortSlowSimulation -alarm=480 -s cvode -lv LOG_STATS LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14347:5-14348:37:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((solution.mass >= 0.0 and solution.mass <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= solution.mass <= 0.0, has value: 1.00024" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:379:7-381:72:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((H2O.SelfClustering_K >= 0.0 and H2O.SelfClustering_K <= 1.0)) --> "Variable violating min/max constraint: 0.0 <= H2O.SelfClustering_K <= 1.0, has value: 53.6279" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14161:5-14162:124:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((relaxed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= relaxed.speciation.subunitSolution.nj, has value: -5.79377e-07" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14166:5-14167:122:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((relaxed.solution.mj >= 0.0 and relaxed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= relaxed.solution.mj <= 0.0, has value: 1.04376e-08" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14161:5-14162:124:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((tensed.speciation.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= tensed.speciation.subunitSolution.nj, has value: -0.0119994" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14166:5-14167:122:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((tensed.solution.mj >= 0.0 and tensed.solution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= tensed.solution.mj <= 0.0, has value: 0.000216173" LOG_ASSERT | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14160:5-14160:67:writable] | | | | The following assertion has been violated at time 0.000000 | | | | ((CO2_free.solution.n >= 0.0 and CO2_free.solution.n <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= CO2_free.solution.n <= 0.0, has value: 1.02081" LOG_SUCCESS | info | The initialization finished successfully without homotopy method. LOG_STATS | info | ### STATISTICS ### | | | | | timer | | | | | | 0.0803404s reading init.xml | | | | | | 0.0039648s reading info.xml | | | | | | 0.000620604s [ 0.2%] pre-initialization | | | | | | 0.00108622s [ 0.3%] initialization | | | | | | 9.5549e-05s [ 0.0%] steps | | | | | | 0.0274009s [ 7.9%] solver (excl. callbacks) | | | | | | 0s [ 0.0%] creating output-file | | | | | | 0.003644s [ 1.0%] event-handling | | | | | | 0.0207936s [ 6.0%] overhead | | | | | | 0.29536s [ 84.6%] simulation | | | | | | 0.349001s [100.0%] total | | | | | events | | | | | | 37 state events | | | | | | 0 time events | | | | | solver: cvode | | | | | | 3133 steps taken | | | | | | 3712 calls of functionODE | | | | | | 86 evaluations of jacobian | | | | | | 59 error test failures | | | | | | 0 convergence test failures | | | | | | 0s time of jacobian evaluation LOG_SUCCESS | info | The simulation finished successfully.